Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4700

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
5,193,651	-		Pf1N1B4_4699	0.86	-0.1
5,193,743	+				-0.3
5,193,744	-				-1.5
5,193,802	+				-1.7
5,193,803	-				+0.7
5,193,803	-				-1.7
5,193,804	+				+0.3
5,193,805	-				-0.9
5,193,809	-				+1.0
5,194,049	+				-0.9
5,194,050	-				+0.0
5,194,094	+				-1.7
5,194,116	+				-0.2
5,194,534	+		Pf1N1B4_4700	0.62	+0.8
5,194,534	+		Pf1N1B4_4700	0.62	+0.5
5,194,992	+				-0.3
5,194,992	+				-2.0
5,194,993	-				-0.7
5,194,993	-				-0.7
5,194,993	-				-2.3
5,195,076	+				+1.3
5,195,076	+				+0.5
5,195,077	-				-1.7
5,195,089	+				+1.3
5,195,094	-				+0.0
5,195,148	+				-0.7
5,195,149	-				+0.5
5,195,206	+				-3.0
5,195,414	+				+0.3
5,195,415	-				+0.9