Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4550

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
5,017,403	-		Pf1N1B4_4549	0.23	-0.7
5,017,703	+				+1.0
5,018,073	+		Pf1N1B4_4549	0.77	-0.6
5,018,074	-		Pf1N1B4_4549	0.78	+0.3
5,018,213	+				-0.2
5,018,214	-				+0.4
5,018,355	-				-0.6
5,018,363	+				+1.2
5,018,572	-		Pf1N1B4_4550	0.21	+0.0
5,018,657	-		Pf1N1B4_4550	0.28	+0.4
5,018,716	+		Pf1N1B4_4550	0.34	-1.7
5,018,738	+		Pf1N1B4_4550	0.36	-2.2
5,018,739	-		Pf1N1B4_4550	0.36	-1.4
5,018,930	+		Pf1N1B4_4550	0.54	+0.4
5,018,950	-				-0.6
5,020,076	+				+0.4
5,020,268	+		Pf1N1B4_4551	0.64	+0.1