Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4247

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
4,708,250	+				-0.5
4,708,250	+				-0.1
4,708,311	+				-2.5
4,708,355	+				-1.1
4,708,355	+				-0.1
4,708,357	+				-0.4
4,708,358	-				-0.5
4,708,577	+				-1.1
4,708,578	-				-0.5
4,708,629	+				+2.1
4,708,630	-				-0.1
4,708,674	+				+0.2
4,708,674	+				-0.5
4,708,744	+				-1.5
4,708,775	+				-0.5
4,708,775	+				+0.5
4,708,775	+				+2.4
4,708,787	-				+2.7
4,708,812	+				-0.0
4,708,812	+				+1.5
4,708,813	-				-0.6
4,708,818	+				-0.7
4,708,823	+				-1.8
4,709,500	+		Pf1N1B4_4247	0.61	-1.6
4,709,500	+		Pf1N1B4_4247	0.61	-0.3
4,709,500	+		Pf1N1B4_4247	0.61	+0.2
4,709,501	-		Pf1N1B4_4247	0.61	-1.1
4,709,798	+		Pf1N1B4_4247	0.87	+1.0
4,709,798	+		Pf1N1B4_4247	0.87	-1.1
4,709,798	+		Pf1N1B4_4247	0.87	-1.1
4,709,798	+		Pf1N1B4_4247	0.87	-1.5
4,709,799	-		Pf1N1B4_4247	0.88	-1.8
4,709,799	-		Pf1N1B4_4247	0.88	-1.6
4,709,986	+				+0.8
4,710,094	+				+1.3
4,710,320	-		Pf1N1B4_4248	0.20	+0.9
4,710,544	+		Pf1N1B4_4248	0.40	-0.5
4,710,593	-				-0.2
4,710,823	+		Pf1N1B4_4248	0.66	-0.3