Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4224

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
4,679,734	+		Pf1N1B4_4223	0.39	-0.8
4,679,734	+		Pf1N1B4_4223	0.39	-0.5
4,679,807	+		Pf1N1B4_4223	0.47	+0.4
4,679,884	-				+2.5
4,679,933	+				+1.5
4,679,934	-		Pf1N1B4_4223	0.61	-2.6
4,679,934	-		Pf1N1B4_4223	0.61	-1.1
4,680,137	-		Pf1N1B4_4223	0.84	-0.2
4,680,244	-				+0.5
4,680,303	+				+1.9
4,680,380	-				-0.5
4,680,403	-				-0.6
4,680,433	+				-0.1
4,680,433	+				-0.8
4,680,437	+				-2.3
4,680,437	+				-0.5
4,680,438	-				-0.1
4,680,542	+				+0.3
4,680,793	+				-0.1
4,680,946	+				+0.2
4,680,946	+				+0.1
4,680,946	+				+0.5
4,680,947	-				-0.5
4,680,982	+				-0.5
4,680,982	+				+0.5
4,681,083	+				-1.5
4,681,083	+		Pf1N1B4_4225	0.14	-0.2
4,681,396	+		Pf1N1B4_4225	0.47	-1.1
4,681,405	+		Pf1N1B4_4225	0.48	-0.8
4,681,499	-		Pf1N1B4_4225	0.58	-3.1
4,681,657	+		Pf1N1B4_4225	0.74	-1.6
4,681,658	-		Pf1N1B4_4225	0.74	-2.6
4,681,669	+				+0.9
4,681,670	-		Pf1N1B4_4225	0.75	+0.5
4,681,670	-				-0.5
4,681,772	+		Pf1N1B4_4225	0.86	-0.1