Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4195

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
4,647,246	-		Pf1N1B4_4194	0.52	+1.3
4,647,563	+				+0.5
4,647,657	-		Pf1N1B4_4194	0.88	-1.1
4,647,766	-				-0.4
4,647,821	-				+0.3
4,647,886	+				+0.0
4,647,887	-				+0.8
4,647,890	+				-1.3
4,648,185	+				+0.5
4,648,185	+		Pf1N1B4_4195	0.44	+0.9
4,648,185	+		Pf1N1B4_4195	0.44	-0.5
4,648,185	+		Pf1N1B4_4195	0.44	+1.1
4,648,185	+		Pf1N1B4_4195	0.44	+0.3
4,648,185	+		Pf1N1B4_4195	0.44	+0.5
4,648,185	+		Pf1N1B4_4195	0.44	+0.0
4,648,185	+				-0.5
4,648,185	+		Pf1N1B4_4195	0.44	+1.3
4,648,185	+				-0.8
4,648,186	-		Pf1N1B4_4195	0.44	+1.5
4,648,186	-		Pf1N1B4_4195	0.44	-0.5
4,648,186	-		Pf1N1B4_4195	0.44	-1.5
4,648,186	-				+0.5
4,648,186	-		Pf1N1B4_4195	0.44	+0.4
4,648,186	-		Pf1N1B4_4195	0.44	+1.5
4,648,329	+		Pf1N1B4_4195	0.69	-0.2
4,648,800	+				-0.3
4,648,874	-				-1.8
4,648,952	+				-2.1
4,648,952	+				-0.5
4,649,015	-				-0.5
4,649,022	+				+1.7
4,649,022	+				-0.8
4,649,117	-				-1.1
4,649,128	+				-1.5