Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4048

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
4,499,795	-				+0.6
4,499,795	-				-0.7
4,499,795	-				+1.6
4,499,811	+				+0.0
4,499,821	+				+1.0
4,499,868	+				+0.6
4,499,950	+				-0.4
4,499,954	-		Pf1N1B4_4047	0.19	+0.6
4,499,954	-		Pf1N1B4_4047	0.19	+0.1
4,499,954	-		Pf1N1B4_4047	0.19	-2.7
4,500,053	+		Pf1N1B4_4047	0.35	-1.2
4,500,053	+		Pf1N1B4_4047	0.35	+2.2
4,500,054	-		Pf1N1B4_4047	0.35	-0.7
4,500,054	-		Pf1N1B4_4047	0.35	-1.2
4,500,054	-		Pf1N1B4_4047	0.35	-1.1
4,500,299	+		Pf1N1B4_4047	0.74	-2.0
4,500,299	+		Pf1N1B4_4047	0.74	+0.2
4,500,299	+		Pf1N1B4_4047	0.74	-1.2
4,500,300	-		Pf1N1B4_4047	0.74	-0.8
4,500,300	-		Pf1N1B4_4047	0.74	-0.9
4,501,709	-				+1.6
4,501,709	-		Pf1N1B4_4049	0.13	-0.5
4,501,806	+		Pf1N1B4_4049	0.35	-0.4
4,501,854	+		Pf1N1B4_4049	0.46	+0.7
4,501,854	+		Pf1N1B4_4049	0.46	+0.9
4,501,855	-		Pf1N1B4_4049	0.46	+0.9
4,501,881	+		Pf1N1B4_4049	0.52	-0.4
4,501,881	+		Pf1N1B4_4049	0.52	-1.4
4,501,881	+		Pf1N1B4_4049	0.52	+0.0
4,501,887	+				+0.6
4,501,887	+		Pf1N1B4_4049	0.53	+1.0
4,501,887	+		Pf1N1B4_4049	0.53	-1.1
4,501,887	+		Pf1N1B4_4049	0.53	-1.2
4,501,887	+		Pf1N1B4_4049	0.53	-0.6
4,502,239	+				-0.1
4,502,239	+				+0.1
4,502,240	-				-2.5
4,502,240	-				-0.2
4,502,240	-				+0.6
4,502,240	-				-2.2
4,502,240	-				-0.5
4,502,240	-				+0.6
4,502,240	-				+1.2
4,502,240	-				-0.5
4,502,240	-				-0.5
4,502,240	-				-0.4
4,502,240	-				+0.6
4,502,243	+				+0.5
4,502,243	+				+0.6
4,502,243	+				-0.7
4,502,243	+				-1.0
4,502,243	+				+0.6
4,502,243	+				+0.6
4,502,243	+				-1.1
4,502,243	+				-1.0
4,502,243	+				+0.3
4,502,243	+				-1.0
4,502,243	+				-0.4
4,502,243	+				+0.9
4,502,243	+				+0.6
4,502,243	+				-0.7
4,502,244	-				-0.5
4,502,244	-				+0.1
4,502,244	-				+0.0
4,502,244	-				+0.6
4,502,244	-				+0.3
4,502,247	+				+0.3
4,502,247	+				+0.9
4,502,247	+				-1.2
4,502,247	+				+0.0
4,502,248	-				-1.0
4,502,248	-				+0.5
4,502,302	+				-1.0
4,502,310	+				-0.7
4,502,551	-				-1.0