Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3834

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
4,246,785	+		Pf1N1B4_3833	0.28	-2.2
4,247,143	+		Pf1N1B4_3833	0.62	-0.8
4,247,143	+		Pf1N1B4_3833	0.62	-0.6
4,247,143	+		Pf1N1B4_3833	0.62	+1.0
4,247,143	+		Pf1N1B4_3833	0.62	-1.8
4,247,143	+		Pf1N1B4_3833	0.62	-1.2
4,247,143	+		Pf1N1B4_3833	0.62	-0.2
4,247,143	+		Pf1N1B4_3833	0.62	-1.6
4,247,143	+		Pf1N1B4_3833	0.62	+1.3
4,247,143	+		Pf1N1B4_3833	0.62	+0.4
4,247,143	+		Pf1N1B4_3833	0.62	+0.3
4,247,143	+		Pf1N1B4_3833	0.62	-2.8
4,247,144	-		Pf1N1B4_3833	0.63	-1.0
4,247,237	+		Pf1N1B4_3833	0.71	+0.2
4,247,283	+		Pf1N1B4_3833	0.76	-0.7
4,247,297	+		Pf1N1B4_3833	0.77	-0.8
4,247,297	+		Pf1N1B4_3833	0.77	-0.2
4,247,297	+		Pf1N1B4_3833	0.77	-1.2
4,247,297	+		Pf1N1B4_3833	0.77	-0.6
4,247,297	+		Pf1N1B4_3833	0.77	-2.2
4,247,297	+		Pf1N1B4_3833	0.77	-2.4
4,247,300	+		Pf1N1B4_3833	0.78	-0.2
4,247,300	+		Pf1N1B4_3833	0.78	+0.1
4,247,300	+		Pf1N1B4_3833	0.78	+0.8
4,247,300	+		Pf1N1B4_3833	0.78	-2.4
4,247,300	+		Pf1N1B4_3833	0.78	+3.1
4,247,300	+		Pf1N1B4_3833	0.78	+0.8
4,247,300	+		Pf1N1B4_3833	0.78	+0.4
4,247,300	+		Pf1N1B4_3833	0.78	-1.6
4,247,300	+		Pf1N1B4_3833	0.78	+0.3
4,247,300	+		Pf1N1B4_3833	0.78	-1.5
4,247,300	+		Pf1N1B4_3833	0.78	-2.0
4,247,300	+		Pf1N1B4_3833	0.78	+0.5
4,247,340	+		Pf1N1B4_3833	0.81	-0.2
4,247,340	+		Pf1N1B4_3833	0.81	-0.8
4,247,340	+		Pf1N1B4_3833	0.81	-2.2
4,247,340	+		Pf1N1B4_3833	0.81	-0.8
4,247,340	+		Pf1N1B4_3833	0.81	-0.0
4,247,340	+		Pf1N1B4_3833	0.81	-0.5
4,247,340	+		Pf1N1B4_3833	0.81	-0.6
4,247,340	+		Pf1N1B4_3833	0.81	-1.0
4,247,340	+		Pf1N1B4_3833	0.81	-1.4
4,247,340	+		Pf1N1B4_3833	0.81	+0.8
4,247,341	-		Pf1N1B4_3833	0.82	-0.4
4,247,341	-		Pf1N1B4_3833	0.82	-2.2
4,247,400	+		Pf1N1B4_3833	0.87	-0.2
4,247,400	+		Pf1N1B4_3833	0.87	-1.2
4,247,400	+		Pf1N1B4_3833	0.87	+0.5
4,247,488	+				-1.2
4,247,488	+				-0.8
4,247,500	+				-0.6
4,247,500	+				-0.8
4,247,500	+				-1.1
4,247,500	+				+0.4
4,247,519	+				+0.8
4,247,519	+				-1.8
4,247,525	+				-0.9
4,247,525	+				+0.5
4,247,529	+				+0.1
4,247,529	+				+1.2
4,247,529	+				-0.5
4,247,529	+				-0.2
4,247,529	+				+1.6
4,247,529	+				+0.8
4,247,529	+				+0.6
4,247,529	+				+0.0
4,247,529	+				+1.1
4,247,529	+				-0.4
4,247,529	+				+0.4
4,247,529	+				+1.8
4,247,529	+				+0.4
4,247,529	+				-0.2
4,247,529	+				-0.5
4,247,530	-				-1.2
4,247,530	-				+1.8
4,247,533	+				+0.3
4,247,533	+				-0.5
4,247,533	+				+0.8
4,247,533	+				-0.2
4,247,533	+				+0.1
4,247,533	+				-0.4
4,247,533	+				+0.4
4,247,533	+				-1.0
4,247,533	+				-0.7
4,247,533	+				-0.8
4,247,533	+				-0.2
4,247,533	+				+1.0
4,247,533	+				+0.8
4,247,533	+				-1.6
4,247,561	+				+0.3
4,247,561	+				-1.2
4,247,561	+				+0.5
4,247,561	+				-1.6
4,247,619	+				-0.2
4,247,619	+				-0.1
4,247,620	-				+0.2
4,247,620	-				-0.2
4,247,653	-				+2.2
4,247,653	-				+0.8
4,247,653	-				+0.4
4,247,653	-				+1.8
4,247,669	+				-0.8
4,247,669	+				+0.5
4,247,669	+				-0.7
4,247,669	+				-0.8
4,247,669	+				+1.3
4,247,670	-				-0.1
4,247,670	-				-0.8
4,247,670	-				+0.0
4,247,670	-				+0.3
4,247,670	-				+0.4
4,247,670	-				+0.5
4,247,670	-				-2.4
4,247,670	-				+1.6
4,247,670	-				-2.0
4,247,670	-				+0.3
4,247,670	-				-0.8
4,247,670	-				+0.6
4,247,670	-				-0.7
4,247,670	-				+1.3
4,247,670	-				+0.7
4,247,670	-				+0.3
4,247,670	-				+3.0
4,247,670	-				-1.1
4,247,703	+				+1.3
4,247,703	+				+0.3
4,247,703	+				+0.7
4,247,703	+				+0.0
4,247,703	+				+0.9
4,247,703	+				+0.2
4,247,703	+				+0.8
4,247,704	-				+0.8
4,247,704	-				+0.4
4,247,704	-				-0.2
4,247,704	-				-0.3
4,247,704	-				-1.4
4,247,704	-				+0.1
4,247,906	-		Pf1N1B4_3834	0.27	-0.1
4,247,906	-				-1.2
4,247,968	+		Pf1N1B4_3834	0.35	+1.0
4,247,968	+		Pf1N1B4_3834	0.35	+1.8
4,247,969	-		Pf1N1B4_3834	0.35	+1.2
4,247,969	-		Pf1N1B4_3834	0.35	-0.2
4,247,970	+		Pf1N1B4_3834	0.35	+2.1
4,247,970	+		Pf1N1B4_3834	0.35	-2.0
4,247,970	+		Pf1N1B4_3834	0.35	+1.0
4,247,970	+		Pf1N1B4_3834	0.35	+0.2
4,247,970	+		Pf1N1B4_3834	0.35	+1.3
4,247,970	+		Pf1N1B4_3834	0.35	+0.6
4,247,970	+				-0.2
4,247,970	+		Pf1N1B4_3834	0.35	-2.2
4,247,970	+		Pf1N1B4_3834	0.35	+0.5
4,247,970	+				-0.8
4,247,970	+		Pf1N1B4_3834	0.35	+0.2
4,247,970	+		Pf1N1B4_3834	0.35	+0.5
4,247,970	+		Pf1N1B4_3834	0.35	+1.1
4,247,971	-		Pf1N1B4_3834	0.35	-0.3
4,247,971	-		Pf1N1B4_3834	0.35	-0.2
4,247,971	-		Pf1N1B4_3834	0.35	+0.8
4,247,971	-		Pf1N1B4_3834	0.35	+2.3
4,247,971	-		Pf1N1B4_3834	0.35	+0.3
4,247,971	-		Pf1N1B4_3834	0.35	+0.0
4,247,971	-		Pf1N1B4_3834	0.35	+0.5
4,247,971	-		Pf1N1B4_3834	0.35	+0.5
4,247,971	-		Pf1N1B4_3834	0.35	+0.2
4,247,971	-		Pf1N1B4_3834	0.35	-0.1
4,247,971	-		Pf1N1B4_3834	0.35	-0.2
4,247,971	-		Pf1N1B4_3834	0.35	-2.8
4,247,971	-		Pf1N1B4_3834	0.35	+1.6
4,247,971	-		Pf1N1B4_3834	0.35	+0.9
4,247,971	-		Pf1N1B4_3834	0.35	+0.5
4,247,971	-		Pf1N1B4_3834	0.35	+0.4
4,247,971	-		Pf1N1B4_3834	0.35	+0.9
4,247,971	-		Pf1N1B4_3834	0.35	+1.0
4,247,971	-		Pf1N1B4_3834	0.35	+0.9
4,248,244	+		Pf1N1B4_3834	0.71	+0.5
4,248,244	+		Pf1N1B4_3834	0.71	+0.3
4,248,245	-		Pf1N1B4_3834	0.71	+0.2
4,248,245	-		Pf1N1B4_3834	0.71	+0.8
4,248,245	-		Pf1N1B4_3834	0.71	-0.5
4,248,245	-		Pf1N1B4_3834	0.71	-0.6
4,248,246	+		Pf1N1B4_3834	0.71	+1.3
4,248,469	+				+0.2
4,248,469	+				+0.4
4,248,469	+				+1.9
4,248,469	+				-1.8
4,248,469	+				+1.3
4,248,469	+				+0.8
4,248,469	+				+0.5
4,248,469	+				-0.0
4,248,469	+				+0.5
4,248,470	-				-0.8
4,248,470	-				-0.6
4,248,470	-				-0.2
4,248,470	-				-0.6
4,248,470	-				+0.0
4,248,726	+				+1.1
4,248,726	+				+1.1
4,248,727	-				+0.6
4,248,727	-				-2.2
4,248,727	-				+0.2
4,248,727	-				-0.8
4,248,866	-		Pf1N1B4_3835	0.14	+1.2
4,248,866	-		Pf1N1B4_3835	0.14	-1.0
4,248,866	-		Pf1N1B4_3835	0.14	-0.5
4,248,873	+				+1.2
4,248,873	+		Pf1N1B4_3835	0.14	+1.8
4,248,908	+		Pf1N1B4_3835	0.16	+1.5
4,248,954	+		Pf1N1B4_3835	0.17	-0.0
4,248,954	+		Pf1N1B4_3835	0.17	+0.4
4,248,954	+		Pf1N1B4_3835	0.17	-0.1
4,248,954	+		Pf1N1B4_3835	0.17	+0.6
4,248,954	+		Pf1N1B4_3835	0.17	+1.1
4,248,954	+				+1.8
4,248,954	+		Pf1N1B4_3835	0.17	+0.5
4,248,955	-		Pf1N1B4_3835	0.17	+0.9
4,248,955	-		Pf1N1B4_3835	0.17	+0.3
4,248,955	-		Pf1N1B4_3835	0.17	+1.0
4,249,026	+		Pf1N1B4_3835	0.20	+0.8
4,249,027	-		Pf1N1B4_3835	0.20	+0.2
4,249,027	-		Pf1N1B4_3835	0.20	-0.8
4,249,060	-		Pf1N1B4_3835	0.21	+0.3
4,249,166	+		Pf1N1B4_3835	0.25	-3.0
4,249,166	+		Pf1N1B4_3835	0.25	-0.2
4,249,167	-		Pf1N1B4_3835	0.25	+0.5
4,249,230	+				+0.2
4,249,230	+		Pf1N1B4_3835	0.28	+0.8
4,249,230	+		Pf1N1B4_3835	0.28	-0.1
4,249,230	+		Pf1N1B4_3835	0.28	-0.8
4,249,230	+		Pf1N1B4_3835	0.28	-1.8
4,249,230	+		Pf1N1B4_3835	0.28	-0.5
4,249,230	+		Pf1N1B4_3835	0.28	+1.0
4,249,230	+		Pf1N1B4_3835	0.28	+1.7
4,249,230	+		Pf1N1B4_3835	0.28	-0.7
4,249,231	-		Pf1N1B4_3835	0.28	+0.3
4,249,231	-		Pf1N1B4_3835	0.28	+1.6
4,249,368	+		Pf1N1B4_3835	0.33	-0.4
4,249,368	+		Pf1N1B4_3835	0.33	+0.2
4,249,369	-		Pf1N1B4_3835	0.33	+0.8
4,249,369	-				-1.2
4,249,369	-		Pf1N1B4_3835	0.33	-0.0
4,249,397	+		Pf1N1B4_3835	0.34	+1.0
4,249,397	+		Pf1N1B4_3835	0.34	+0.6
4,249,397	+		Pf1N1B4_3835	0.34	-1.0
4,249,398	-				+0.2