Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3536

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
3,942,783	+		Pf1N1B4_3535	0.58	-0.2
3,942,783	+		Pf1N1B4_3535	0.58	+0.1
3,942,783	+		Pf1N1B4_3535	0.58	-1.2
3,942,783	+		Pf1N1B4_3535	0.58	+0.4
3,942,783	+		Pf1N1B4_3535	0.58	-1.4
3,942,784	-		Pf1N1B4_3535	0.58	-1.2
3,942,784	-		Pf1N1B4_3535	0.58	+1.4
3,942,784	-		Pf1N1B4_3535	0.58	-1.5
3,942,784	-		Pf1N1B4_3535	0.58	-0.8
3,942,784	-		Pf1N1B4_3535	0.58	-1.9
3,942,792	+		Pf1N1B4_3535	0.58	-0.0
3,942,912	+		Pf1N1B4_3535	0.65	+1.0
3,942,912	+				-1.8
3,942,913	-		Pf1N1B4_3535	0.65	-0.2
3,942,913	-		Pf1N1B4_3535	0.65	-0.2
3,942,913	-		Pf1N1B4_3535	0.65	+0.7
3,942,913	-		Pf1N1B4_3535	0.65	-1.2
3,942,913	-		Pf1N1B4_3535	0.65	-0.0
3,942,913	-		Pf1N1B4_3535	0.65	-2.2
3,943,216	+		Pf1N1B4_3535	0.82	-0.1
3,943,216	+		Pf1N1B4_3535	0.82	-1.0
3,943,216	+		Pf1N1B4_3535	0.82	-1.4
3,943,216	+		Pf1N1B4_3535	0.82	-0.9
3,943,216	+				-0.2
3,943,216	+				-1.2
3,943,216	+		Pf1N1B4_3535	0.82	-1.5
3,943,216	+		Pf1N1B4_3535	0.82	+0.3
3,943,216	+		Pf1N1B4_3535	0.82	-0.5
3,943,216	+		Pf1N1B4_3535	0.82	+0.1
3,943,216	+		Pf1N1B4_3535	0.82	-2.0
3,943,216	+		Pf1N1B4_3535	0.82	-0.5
3,943,217	-		Pf1N1B4_3535	0.82	+0.8
3,943,217	-		Pf1N1B4_3535	0.82	+0.1
3,943,217	-		Pf1N1B4_3535	0.82	-0.4
3,943,217	-		Pf1N1B4_3535	0.82	-0.2
3,943,217	-		Pf1N1B4_3535	0.82	+0.2
3,943,217	-		Pf1N1B4_3535	0.82	-3.1
3,943,217	-		Pf1N1B4_3535	0.82	-1.3
3,943,563	-				-1.2
3,943,563	-				-0.8
3,943,563	-				-0.2
3,943,563	-				-0.2
3,943,563	-				+0.8
3,943,647	+				+0.4
3,943,647	+				+1.0
3,943,721	+				-0.8
3,943,721	+				-0.1
3,943,743	+		Pf1N1B4_3536	0.11	-1.9
3,943,743	+		Pf1N1B4_3536	0.11	-0.3
3,943,743	+		Pf1N1B4_3536	0.11	-2.1
3,943,744	-		Pf1N1B4_3536	0.12	-2.4
3,943,744	-		Pf1N1B4_3536	0.12	-0.7
3,943,744	-		Pf1N1B4_3536	0.12	-1.5
3,943,744	-		Pf1N1B4_3536	0.12	-0.0
3,943,744	-		Pf1N1B4_3536	0.12	-2.2
3,943,802	+		Pf1N1B4_3536	0.32	-0.1
3,943,802	+		Pf1N1B4_3536	0.32	-1.8
3,943,802	+		Pf1N1B4_3536	0.32	+1.2
3,944,279	+		Pf1N1B4_3537	0.32	+0.2
3,944,279	+		Pf1N1B4_3537	0.32	+0.1
3,944,280	-		Pf1N1B4_3537	0.32	+0.1
3,944,288	+		Pf1N1B4_3537	0.33	+0.8
3,944,289	-		Pf1N1B4_3537	0.33	-0.4
3,944,289	-		Pf1N1B4_3537	0.33	+1.4
3,944,289	-		Pf1N1B4_3537	0.33	+0.8
3,944,289	-		Pf1N1B4_3537	0.33	+0.1
3,944,495	-		Pf1N1B4_3537	0.56	+0.1
3,944,495	-		Pf1N1B4_3537	0.56	+1.5
3,944,495	-		Pf1N1B4_3537	0.56	-0.2
3,944,498	-		Pf1N1B4_3537	0.57	+0.3
3,944,898	-				+1.8
3,944,935	-				+0.8
3,944,935	-				+0.8