Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3152

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
3,530,885	+		Pf1N1B4_3150	0.25	+0.7
3,530,886	-		Pf1N1B4_3150	0.25	-1.0
3,531,244	+		Pf1N1B4_3150	0.80	+0.0
3,531,370	+				-0.9
3,531,370	+				-0.3
3,531,370	+				-0.2
3,531,370	+				-0.6
3,531,370	+				-0.6
3,531,370	+				-1.0
3,531,379	-				-0.1
3,531,411	+				-0.6
3,531,411	+				+0.2
3,531,411	+				-0.2
3,531,443	-				+0.3
3,531,447	+				-1.0
3,531,447	+				-1.0
3,531,447	+				+0.0
3,531,447	+				-0.3
3,531,448	-				-0.8
3,531,448	-				-1.3
3,531,448	-				-0.3
3,531,448	-				+1.0
3,531,448	-				+0.3
3,531,448	-				-0.8
3,531,808	+				+0.4
3,531,808	+				+0.0
3,531,905	-				+1.0
3,531,905	-				+0.3
3,531,928	+		Pf1N1B4_3152	0.13	-0.6
3,531,928	+		Pf1N1B4_3152	0.13	+1.0
3,531,928	+		Pf1N1B4_3152	0.13	+0.4
3,531,928	+		Pf1N1B4_3152	0.13	+0.9
3,531,928	+		Pf1N1B4_3152	0.13	+0.7
3,531,929	-		Pf1N1B4_3152	0.13	+0.8
3,531,929	-		Pf1N1B4_3152	0.13	+1.3
3,532,300	-		Pf1N1B4_3152	0.53	+0.4
3,532,319	-		Pf1N1B4_3152	0.55	+0.7
3,532,424	-		Pf1N1B4_3152	0.67	+0.8
3,532,424	-		Pf1N1B4_3152	0.67	+0.1
3,532,424	-		Pf1N1B4_3152	0.67	+0.4
3,532,424	-		Pf1N1B4_3152	0.67	+1.2
3,532,424	-		Pf1N1B4_3152	0.67	+0.0
3,532,424	-		Pf1N1B4_3152	0.67	+0.6
3,532,424	-		Pf1N1B4_3152	0.67	+1.4
3,532,424	-		Pf1N1B4_3152	0.67	+0.5
3,532,424	-		Pf1N1B4_3152	0.67	+0.5
3,532,424	-		Pf1N1B4_3152	0.67	+0.6
3,532,431	+		Pf1N1B4_3152	0.67	+1.0
3,532,704	+				-0.5
3,532,724	+				-1.2
3,532,724	+				+1.4
3,532,724	+				+1.0
3,532,779	+				+0.6
3,532,794	+		Pf1N1B4_3153	0.19	-0.7
3,532,794	+		Pf1N1B4_3153	0.19	-1.0
3,532,794	+		Pf1N1B4_3153	0.19	+0.8
3,532,794	+				+1.4
3,532,794	+		Pf1N1B4_3153	0.19	+2.0
3,532,794	+		Pf1N1B4_3153	0.19	+1.0
3,532,794	+				+0.4
3,532,794	+		Pf1N1B4_3153	0.19	+0.3
3,533,632	+				-0.7
3,533,632	+				-0.7
3,533,632	+				-1.0
3,533,632	+				-0.3
3,533,632	+				-0.2
3,533,632	+				+2.0
3,533,632	+				-1.6
3,533,632	+				+0.3
3,533,633	-				+1.0
3,533,633	-				+0.3
3,533,633	-				-0.3
3,533,633	-				-1.6
3,533,633	-				+1.6