Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2794

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
3,138,023	+		Pf1N1B4_2792	0.73	+0.5
3,138,023	+		Pf1N1B4_2792	0.73	-1.0
3,138,023	+		Pf1N1B4_2792	0.73	-2.1
3,138,023	+		Pf1N1B4_2792	0.73	-1.1
3,138,023	+		Pf1N1B4_2792	0.73	+0.2
3,138,023	+		Pf1N1B4_2792	0.73	-0.5
3,138,076	+				-0.8
3,138,142	-				+0.3
3,138,242	+				-1.8
3,138,243	-				-2.8
3,138,243	-				-1.3
3,138,611	-		Pf1N1B4_2793	0.61	-1.1
3,138,652	+		Pf1N1B4_2793	0.68	-1.8
3,138,653	-		Pf1N1B4_2793	0.68	-0.1
3,138,751	+		Pf1N1B4_2793	0.84	+1.2
3,138,751	+		Pf1N1B4_2793	0.84	+0.2
3,138,751	+		Pf1N1B4_2793	0.84	+0.8
3,138,751	+		Pf1N1B4_2793	0.84	-0.5
3,138,751	+		Pf1N1B4_2793	0.84	-1.6
3,138,752	-				+0.6
3,138,752	-		Pf1N1B4_2793	0.84	+1.5
3,138,752	-		Pf1N1B4_2793	0.84	-0.3
3,138,752	-		Pf1N1B4_2793	0.84	+1.2
3,138,752	-		Pf1N1B4_2793	0.84	+0.4
3,138,812	+				-1.3
3,138,813	-				-0.6
3,138,813	-				+0.2
3,138,818	+				+0.3
3,138,847	+				+0.2
3,138,848	-				+1.7
3,138,848	-				+0.0
3,138,997	-				+0.3
3,138,997	-				+0.5
3,138,997	-				-0.3
3,139,045	+		Pf1N1B4_2794	0.20	+0.4
3,139,046	-		Pf1N1B4_2794	0.21	-1.1
3,139,105	-		Pf1N1B4_2794	0.43	-1.9
3,139,164	+		Pf1N1B4_2794	0.66	-1.6
3,139,165	-		Pf1N1B4_2794	0.67	-0.3
3,139,207	+		Pf1N1B4_2794	0.83	+2.2
3,139,207	+		Pf1N1B4_2794	0.83	-1.1
3,139,208	-		Pf1N1B4_2794	0.83	-0.9
3,139,243	+				-0.3
3,139,243	+				-0.3
3,139,243	+				+0.2
3,139,243	+				-2.1
3,139,243	+				+0.5
3,139,244	-				+1.0
3,139,244	-				-0.6
3,139,244	-				+0.4
3,139,244	-				+1.2
3,139,244	-				+0.7
3,139,244	-				+0.4
3,139,244	-				+0.6
3,139,244	-				+1.4
3,139,314	+				-1.3
3,139,751	+		Pf1N1B4_2795	0.86	-0.3
3,139,751	+		Pf1N1B4_2795	0.86	+0.5
3,139,752	-		Pf1N1B4_2795	0.87	+1.7
3,139,752	-		Pf1N1B4_2795	0.87	-0.6
3,139,752	-		Pf1N1B4_2795	0.87	+0.2
3,139,752	-		Pf1N1B4_2795	0.87	+1.2
3,139,752	-		Pf1N1B4_2795	0.87	+0.8
3,139,752	-		Pf1N1B4_2795	0.87	-0.3
3,139,752	-		Pf1N1B4_2795	0.87	-0.3
3,139,752	-		Pf1N1B4_2795	0.87	-0.3
3,139,757	+		Pf1N1B4_2795	0.88	+1.8
3,139,757	+		Pf1N1B4_2795	0.88	+0.0
3,139,757	+		Pf1N1B4_2795	0.88	+0.2
3,139,758	-		Pf1N1B4_2795	0.88	+0.2
3,139,758	-		Pf1N1B4_2795	0.88	-1.3
3,139,799	-				+0.6
3,139,839	+				-0.8
3,139,839	+				-0.9
3,139,839	+				+0.2
3,139,839	+				-1.1
3,139,839	+				+0.9
3,139,839	+				-0.6
3,139,839	+				+0.2
3,139,839	+				-0.2
3,139,840	-				-0.4
3,139,840	-				-0.2
3,139,840	-				-1.5
3,139,840	-				-2.3
3,139,840	-				-1.5
3,139,841	+				-1.1
3,139,920	+				-1.5
3,139,921	-				-0.8
3,139,921	-				+0.2
3,139,954	-				+0.2
3,139,954	-				-0.3