Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2715

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
3,051,239	+		Pf1N1B4_2713	0.17	-1.1
3,051,240	-		Pf1N1B4_2713	0.18	-1.1
3,051,249	-				+0.7
3,051,249	-		Pf1N1B4_2713	0.20	+1.8
3,051,249	-		Pf1N1B4_2713	0.20	+0.7
3,051,263	+		Pf1N1B4_2713	0.25	+2.6
3,051,264	-		Pf1N1B4_2713	0.25	-0.9
3,051,264	-		Pf1N1B4_2713	0.25	-0.7
3,051,565	+				+0.3
3,051,566	-				+0.4
3,051,566	-				-0.7
3,051,566	-				-1.3
3,051,566	-				-0.3
3,051,706	+				-0.7
3,051,706	+				-1.1
3,051,706	+				-1.1
3,051,706	+				+0.8
3,051,706	+				-0.3
3,051,706	+				+0.3
3,051,707	-		Pf1N1B4_2714	0.10	-0.1
3,051,707	-		Pf1N1B4_2714	0.10	+0.3
3,051,707	-		Pf1N1B4_2714	0.10	+0.3
3,051,707	-		Pf1N1B4_2714	0.10	-0.7
3,051,707	-		Pf1N1B4_2714	0.10	+1.0
3,051,707	-		Pf1N1B4_2714	0.10	+0.3
3,051,707	-		Pf1N1B4_2714	0.10	-0.2
3,051,707	-		Pf1N1B4_2714	0.10	+1.6
3,051,707	-		Pf1N1B4_2714	0.10	+0.0
3,051,711	-		Pf1N1B4_2714	0.11	+2.3
3,052,218	-				+0.1
3,052,274	-		Pf1N1B4_2715	0.25	+0.4
3,052,274	-		Pf1N1B4_2715	0.25	+1.5
3,052,274	-		Pf1N1B4_2715	0.25	-0.1
3,052,274	-		Pf1N1B4_2715	0.25	+0.2
3,052,274	-		Pf1N1B4_2715	0.25	+0.3
3,052,274	-		Pf1N1B4_2715	0.25	-0.5
3,052,290	-		Pf1N1B4_2715	0.35	+0.1
3,052,327	-		Pf1N1B4_2715	0.57	+0.8
3,052,327	-		Pf1N1B4_2715	0.57	+0.1
3,052,327	-		Pf1N1B4_2715	0.57	+1.7
3,052,327	-		Pf1N1B4_2715	0.57	+0.0
3,052,327	-		Pf1N1B4_2715	0.57	-0.8
3,052,327	-		Pf1N1B4_2715	0.57	-1.4
3,052,327	-		Pf1N1B4_2715	0.57	+1.3
3,052,327	-		Pf1N1B4_2715	0.57	+0.7
3,052,329	-		Pf1N1B4_2715	0.58	+1.2
3,052,329	-		Pf1N1B4_2715	0.58	+0.7
3,052,329	-		Pf1N1B4_2715	0.58	-2.1
3,052,329	-		Pf1N1B4_2715	0.58	-0.7
3,052,329	-		Pf1N1B4_2715	0.58	+1.2
3,052,329	-		Pf1N1B4_2715	0.58	-0.0
3,052,329	-		Pf1N1B4_2715	0.58	+0.3
3,052,329	-		Pf1N1B4_2715	0.58	+1.3
3,052,351	-		Pf1N1B4_2715	0.72	+1.3
3,052,351	-		Pf1N1B4_2715	0.72	-0.3
3,052,385	-				+1.7
3,052,432	-				+1.8
3,052,432	-				-0.6