Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2637

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
2,976,488	+				-0.7
2,976,488	+				+2.1
2,976,489	-				-0.0
2,976,489	-				+0.7
2,976,489	-				+0.9
2,976,489	-				+1.9
2,976,489	-				+0.4
2,976,882	+				-0.2
2,976,965	-		Pf1N1B4_2635	0.26	+0.9
2,976,965	-		Pf1N1B4_2635	0.26	-0.3
2,976,965	-		Pf1N1B4_2635	0.26	+0.3
2,976,965	-		Pf1N1B4_2635	0.26	-1.0
2,976,992	+		Pf1N1B4_2635	0.39	+1.9
2,977,073	-		Pf1N1B4_2635	0.78	+0.1
2,977,073	-		Pf1N1B4_2635	0.78	+1.3
2,977,127	-				-1.4
2,977,152	+				-0.9
2,977,153	-				+0.8
2,977,153	-				+0.3
2,977,153	-				+0.6
2,977,153	-				-0.1
2,977,153	-				+0.3
2,977,153	-				+0.1
2,977,153	-				+1.4
2,977,153	-				+0.4
2,977,153	-				-0.5
2,977,160	-				+1.3
2,977,210	+				-1.7
2,977,279	+				-1.3
2,977,279	+				+1.3
2,977,279	+				+0.8
2,977,279	+				+0.4
2,977,279	+				+1.3
2,977,294	+				+1.0
2,977,294	+				+0.6
2,977,294	+				+0.1
2,977,294	+				+0.3
2,977,294	+				-0.0
2,977,294	+				+0.3
2,977,294	+				+1.7
2,977,294	+				+0.2
2,977,294	+				+0.2
2,977,294	+				+0.8
2,977,294	+				+0.1
2,977,294	+				+1.1
2,977,294	+				+1.3
2,977,294	+				-0.2
2,977,294	+				-0.9
2,977,294	+				+1.2
2,977,294	+				+0.5
2,977,294	+				+1.9
2,977,294	+				+0.9
2,977,294	+				+0.4
2,977,294	+				-2.6
2,977,294	+				+1.9
2,977,294	+				+2.0
2,977,294	+				+1.3
2,977,294	+				+0.6
2,977,294	+				+0.3
2,977,294	+				+0.3
2,977,294	+				+0.3
2,977,294	+				+3.0
2,977,294	+				+1.0
2,977,299	+				+0.4
2,977,299	+				-0.6
2,977,299	+				+0.8
2,977,459	+				+1.3
2,977,459	+				+1.3
2,977,462	+				+0.9
2,977,462	+				+2.1
2,977,462	+				-1.7
2,977,462	+				-0.1
2,977,462	+				+1.9
2,977,462	+				+1.0
2,977,462	+				+0.7
2,977,462	+				+2.9
2,977,462	+				-0.6
2,977,462	+				+0.1
2,977,462	+				-0.3
2,977,462	+				+1.1
2,977,462	+				+0.6
2,977,462	+				+0.1
2,977,462	+				+0.5
2,977,462	+				+0.8
2,977,462	+				+0.8
2,977,462	+				+0.8
2,977,585	+		Pf1N1B4_2637	0.20	+0.0
2,977,618	+		Pf1N1B4_2637	0.24	+0.4
2,977,618	+		Pf1N1B4_2637	0.24	+0.3
2,977,909	+		Pf1N1B4_2637	0.65	+0.3
2,977,909	+		Pf1N1B4_2637	0.65	+0.6
2,977,909	+		Pf1N1B4_2637	0.65	+1.9
2,977,909	+		Pf1N1B4_2637	0.65	+1.3
2,977,909	+		Pf1N1B4_2637	0.65	+1.9
2,977,909	+		Pf1N1B4_2637	0.65	+0.6
2,977,909	+		Pf1N1B4_2637	0.65	+1.7
2,977,909	+		Pf1N1B4_2637	0.65	+1.3
2,977,909	+		Pf1N1B4_2637	0.65	+0.5
2,977,909	+		Pf1N1B4_2637	0.65	+1.1
2,977,909	+		Pf1N1B4_2637	0.65	+2.1
2,977,909	+				+1.7
2,977,909	+		Pf1N1B4_2637	0.65	-1.3
2,977,909	+		Pf1N1B4_2637	0.65	+1.3
2,977,909	+		Pf1N1B4_2637	0.65	-0.5
2,977,909	+		Pf1N1B4_2637	0.65	-0.3
2,977,909	+		Pf1N1B4_2637	0.65	+2.3
2,977,909	+		Pf1N1B4_2637	0.65	+0.7
2,977,909	+		Pf1N1B4_2637	0.65	+0.8
2,977,909	+		Pf1N1B4_2637	0.65	+0.1
2,978,135	+				+1.3
2,978,142	+				-0.3
2,978,142	+				+1.1
2,978,149	+				+0.8
2,978,149	+				+0.6
2,979,090	-				-0.4