Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2534

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
2,873,872	+		Pf1N1B4_2533	0.28	-1.0
2,874,329	+				+0.5
2,874,329	+				-0.0
2,874,329	+				-2.0
2,874,329	+				+0.7
2,874,329	+				-0.3
2,874,330	-				+0.3
2,874,341	+				+0.3
2,874,342	-				-0.9
2,874,490	-				+0.3
2,874,490	-				-0.3
2,874,549	+		Pf1N1B4_2534	0.18	-1.5
2,874,549	+		Pf1N1B4_2534	0.18	-0.8
2,874,721	+		Pf1N1B4_2534	0.42	-1.4
2,874,918	-		Pf1N1B4_2534	0.70	+1.6
2,875,091	+				-0.1
2,875,091	+				+0.3
2,875,093	+				-1.7
2,875,093	+				-0.7
2,875,093	+				-0.7
2,875,093	+				+0.1
2,875,093	+				-0.6
2,875,093	+				-1.0
2,875,093	+				-1.2
2,875,093	+				+0.3
2,875,093	+				-0.3
2,875,093	+				-1.7
2,875,093	+				+0.4
2,875,093	+				+0.5
2,875,093	+				-1.5
2,875,093	+				+0.6
2,875,093	+				+0.7
2,875,093	+				-0.1
2,875,093	+				+1.3
2,875,093	+				-0.0
2,875,093	+				-0.5
2,875,094	-				-1.1
2,875,094	-				-0.2
2,875,094	-				-0.3
2,875,094	-				+1.3
2,875,217	+				+1.3
2,875,218	-				-0.3
2,875,218	-				-1.0
2,875,425	-		Pf1N1B4_2535	0.16	-1.4
2,875,445	+		Pf1N1B4_2535	0.18	+0.4
2,875,446	-		Pf1N1B4_2535	0.18	-1.3
2,875,447	+		Pf1N1B4_2535	0.18	+0.3
2,875,447	+		Pf1N1B4_2535	0.18	+0.4
2,875,447	+		Pf1N1B4_2535	0.18	-0.7
2,875,447	+		Pf1N1B4_2535	0.18	-2.0
2,875,447	+		Pf1N1B4_2535	0.18	-0.3
2,875,447	+		Pf1N1B4_2535	0.18	-0.4
2,875,447	+		Pf1N1B4_2535	0.18	+1.8
2,875,447	+		Pf1N1B4_2535	0.18	-1.0
2,875,447	+		Pf1N1B4_2535	0.18	-0.7
2,875,447	+		Pf1N1B4_2535	0.18	+0.7
2,875,447	+		Pf1N1B4_2535	0.18	+1.9
2,875,447	+		Pf1N1B4_2535	0.18	-0.9
2,875,448	-		Pf1N1B4_2535	0.18	-0.4
2,875,448	-		Pf1N1B4_2535	0.18	+1.3
2,875,448	-		Pf1N1B4_2535	0.18	-0.7
2,875,448	-		Pf1N1B4_2535	0.18	+0.5
2,875,448	-		Pf1N1B4_2535	0.18	-0.3
2,875,448	-		Pf1N1B4_2535	0.18	+0.2
2,875,448	-		Pf1N1B4_2535	0.18	-1.5
2,875,448	-		Pf1N1B4_2535	0.18	-0.7
2,875,448	-		Pf1N1B4_2535	0.18	-0.2
2,875,511	+		Pf1N1B4_2535	0.25	-0.4
2,875,512	-		Pf1N1B4_2535	0.25	+1.3
2,875,576	+		Pf1N1B4_2535	0.31	-2.2
2,875,577	-		Pf1N1B4_2535	0.31	-1.7
2,875,622	+		Pf1N1B4_2535	0.36	-1.9
2,875,623	-		Pf1N1B4_2535	0.36	-1.5
2,875,623	-		Pf1N1B4_2535	0.36	-1.5
2,875,623	-		Pf1N1B4_2535	0.36	-0.0
2,875,838	+		Pf1N1B4_2535	0.58	+1.3
2,875,838	+				+1.3
2,875,973	+		Pf1N1B4_2535	0.71	+0.7
2,875,973	+		Pf1N1B4_2535	0.71	+0.3
2,875,974	-		Pf1N1B4_2535	0.71	+2.3
2,876,106	-		Pf1N1B4_2535	0.85	+0.3
2,876,106	-		Pf1N1B4_2535	0.85	-1.0