Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2490

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
2,822,298	+				-1.0
2,822,298	+				-1.3
2,822,299	-				-1.9
2,822,299	-				-1.7
2,822,305	-				-1.8
2,822,305	-				-0.4
2,822,305	-				-1.9
2,822,305	-				-1.3
2,822,305	-				-1.5
2,822,305	-				-2.1
2,822,813	+		Pf1N1B4_2489	0.63	-1.0
2,822,813	+		Pf1N1B4_2489	0.63	+0.3
2,822,813	+				+0.3
2,822,813	+		Pf1N1B4_2489	0.63	-1.6
2,822,813	+		Pf1N1B4_2489	0.63	+0.3
2,822,813	+		Pf1N1B4_2489	0.63	+0.6
2,822,813	+		Pf1N1B4_2489	0.63	-2.0
2,822,813	+		Pf1N1B4_2489	0.63	+1.0
2,822,813	+		Pf1N1B4_2489	0.63	-1.0
2,822,813	+		Pf1N1B4_2489	0.63	+1.3
2,822,813	+		Pf1N1B4_2489	0.63	-1.5
2,822,814	-		Pf1N1B4_2489	0.63	+0.3
2,823,070	+				+1.3
2,823,070	+				+0.3
2,823,071	-				-2.1
2,823,071	-				-0.3
2,823,086	+				-1.1
2,823,086	+				+0.2
2,823,087	-				+0.3
2,823,163	+		Pf1N1B4_2490	0.11	+1.9
2,823,163	+		Pf1N1B4_2490	0.11	-1.1
2,823,163	+		Pf1N1B4_2490	0.11	-2.3
2,823,163	+		Pf1N1B4_2490	0.11	+1.3
2,823,164	-		Pf1N1B4_2490	0.11	-1.0
2,823,209	+		Pf1N1B4_2490	0.16	-1.7
2,823,209	+		Pf1N1B4_2490	0.16	-1.0
2,823,209	+		Pf1N1B4_2490	0.16	+0.1
2,823,210	-		Pf1N1B4_2490	0.16	-1.9
2,823,210	-		Pf1N1B4_2490	0.16	-1.5
2,823,210	-		Pf1N1B4_2490	0.16	+0.6
2,823,531	+		Pf1N1B4_2490	0.56	-0.7
2,823,532	-		Pf1N1B4_2490	0.56	+0.1
2,823,542	+		Pf1N1B4_2490	0.57	-2.1
2,823,543	-		Pf1N1B4_2490	0.57	-1.5
2,823,543	-		Pf1N1B4_2490	0.57	-1.8
2,823,543	-		Pf1N1B4_2490	0.57	-2.1
2,823,543	-		Pf1N1B4_2490	0.57	-2.1
2,823,553	+		Pf1N1B4_2490	0.59	+0.5
2,823,554	-		Pf1N1B4_2490	0.59	+0.6
2,823,554	-		Pf1N1B4_2490	0.59	-1.5
2,823,554	-		Pf1N1B4_2490	0.59	-1.4
2,823,625	+		Pf1N1B4_2490	0.68	-0.7
2,823,626	-		Pf1N1B4_2490	0.68	-1.3
2,823,626	-		Pf1N1B4_2490	0.68	+0.1
2,823,694	+		Pf1N1B4_2490	0.76	-1.0
2,823,811	+				-0.1
2,823,811	+				-0.7
2,823,812	-				-0.7
2,823,812	-				-0.3
2,823,812	-				-0.3
2,823,850	+				-2.0
2,823,850	+				-1.0
2,823,850	+				+0.4
2,823,851	-				-0.7
2,823,884	+				-0.2
2,823,885	-				+0.0
2,823,885	-				-0.7
2,823,897	+				+2.3
2,823,897	+				+0.1
2,823,897	+				-0.1
2,823,897	+				-0.9
2,823,897	+				-0.7
2,823,898	-				-0.1
2,823,898	-				-1.0
2,823,898	-				-1.5
2,824,089	+		Pf1N1B4_2491	0.30	-0.4
2,824,089	+		Pf1N1B4_2491	0.30	-1.0
2,824,089	+		Pf1N1B4_2491	0.30	-1.7
2,824,089	+		Pf1N1B4_2491	0.30	-1.3
2,824,090	-		Pf1N1B4_2491	0.30	-1.2
2,824,090	-		Pf1N1B4_2491	0.30	-0.3
2,824,090	-		Pf1N1B4_2491	0.30	-1.4
2,824,090	-		Pf1N1B4_2491	0.30	-2.0
2,824,090	-		Pf1N1B4_2491	0.30	-2.3
2,824,583	+				-0.7
2,824,583	+				-1.7
2,824,583	+				+1.0
2,824,730	+		Pf1N1B4_2492	0.15	+0.7
2,824,730	+		Pf1N1B4_2492	0.15	-0.3
2,824,880	+		Pf1N1B4_2492	0.65	-0.7
2,824,880	+		Pf1N1B4_2492	0.65	-2.0
2,824,881	-		Pf1N1B4_2492	0.66	-0.7
2,824,881	-		Pf1N1B4_2492	0.66	-0.7
2,824,881	-		Pf1N1B4_2492	0.66	-1.4