Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2249

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
2,564,634	+				-0.6
2,564,650	+				-0.6
2,564,693	+		Pf1N1B4_2248	0.11	+0.4
2,564,694	-		Pf1N1B4_2248	0.12	+2.4
2,564,888	+		Pf1N1B4_2248	0.32	-2.7
2,564,888	+		Pf1N1B4_2248	0.32	-0.5
2,564,888	+		Pf1N1B4_2248	0.32	+0.6
2,564,888	+		Pf1N1B4_2248	0.32	+1.4
2,564,888	+		Pf1N1B4_2248	0.32	+0.4
2,564,889	-		Pf1N1B4_2248	0.32	+0.8
2,564,889	-		Pf1N1B4_2248	0.32	+0.0
2,564,889	-				+1.4
2,564,889	-		Pf1N1B4_2248	0.32	-0.2
2,564,889	-		Pf1N1B4_2248	0.32	-1.8
2,564,889	-		Pf1N1B4_2248	0.32	+0.9
2,564,889	-		Pf1N1B4_2248	0.32	-1.4
2,564,889	-		Pf1N1B4_2248	0.32	+0.6
2,564,889	-		Pf1N1B4_2248	0.32	-0.3
2,564,889	-		Pf1N1B4_2248	0.32	-1.1
2,564,889	-		Pf1N1B4_2248	0.32	+3.4
2,565,014	+		Pf1N1B4_2248	0.45	-1.4
2,565,014	+		Pf1N1B4_2248	0.45	+1.0
2,565,014	+		Pf1N1B4_2248	0.45	+1.4
2,565,014	+		Pf1N1B4_2248	0.45	-0.4
2,565,014	+		Pf1N1B4_2248	0.45	+0.0
2,565,014	+		Pf1N1B4_2248	0.45	+0.0
2,565,015	-		Pf1N1B4_2248	0.45	-1.3
2,565,015	-				-0.6
2,565,053	+		Pf1N1B4_2248	0.49	+0.1
2,565,053	+		Pf1N1B4_2248	0.49	-0.2
2,565,053	+		Pf1N1B4_2248	0.49	+0.8
2,565,054	-		Pf1N1B4_2248	0.49	+0.4
2,565,054	-		Pf1N1B4_2248	0.49	-1.4
2,565,054	-		Pf1N1B4_2248	0.49	-0.1
2,565,146	+		Pf1N1B4_2248	0.58	-1.0
2,565,224	+		Pf1N1B4_2248	0.66	-0.6
2,565,225	-		Pf1N1B4_2248	0.67	+0.6
2,565,225	-		Pf1N1B4_2248	0.67	+0.9
2,565,225	-		Pf1N1B4_2248	0.67	+0.5
2,565,242	+		Pf1N1B4_2248	0.68	+1.8
2,565,242	+		Pf1N1B4_2248	0.68	+0.8
2,565,243	-		Pf1N1B4_2248	0.68	+0.4
2,565,243	-		Pf1N1B4_2248	0.68	+0.0
2,565,243	-		Pf1N1B4_2248	0.68	+0.8
2,565,418	+		Pf1N1B4_2248	0.87	+0.8
2,565,429	+		Pf1N1B4_2248	0.88	-0.2
2,565,429	+		Pf1N1B4_2248	0.88	-0.6
2,565,429	+		Pf1N1B4_2248	0.88	-1.7
2,565,430	-		Pf1N1B4_2248	0.88	+0.8
2,565,430	-		Pf1N1B4_2248	0.88	+0.4
2,565,464	+				-0.2
2,565,465	-				+1.1
2,565,465	-				+0.4
2,565,465	-				-0.6
2,565,545	+				+1.3
2,565,545	+				+1.5
2,565,546	-				-1.8
2,565,584	+				+0.9
2,565,585	-				-1.3
2,565,603	-				-1.0
2,566,020	+		Pf1N1B4_2249	0.39	-2.1
2,566,021	-		Pf1N1B4_2249	0.39	+0.4
2,566,063	-		Pf1N1B4_2249	0.43	-0.6
2,566,547	+		Pf1N1B4_2249	0.85	-1.2
2,566,547	+		Pf1N1B4_2249	0.85	-1.0
2,566,547	+		Pf1N1B4_2249	0.85	+0.8
2,566,548	-		Pf1N1B4_2249	0.85	+0.0
2,566,548	-		Pf1N1B4_2249	0.85	-1.2
2,566,606	+		Pf1N1B4_2249	0.90	-1.0
2,566,606	+		Pf1N1B4_2249	0.90	-2.6
2,566,607	-				-0.1
2,566,657	-				-0.0
2,566,961	+		Pf1N1B4_2250	0.29	-0.8
2,566,961	+		Pf1N1B4_2250	0.29	+0.0
2,566,961	+		Pf1N1B4_2250	0.29	-0.7
2,566,961	+		Pf1N1B4_2250	0.29	+0.6
2,566,961	+		Pf1N1B4_2250	0.29	+0.5
2,566,961	+		Pf1N1B4_2250	0.29	+0.8
2,566,961	+		Pf1N1B4_2250	0.29	+0.4
2,566,962	-		Pf1N1B4_2250	0.30	-0.2
2,567,136	+		Pf1N1B4_2250	0.52	+0.1
2,567,136	+		Pf1N1B4_2250	0.52	-0.6
2,567,137	-		Pf1N1B4_2250	0.52	-0.2
2,567,137	-		Pf1N1B4_2250	0.52	-0.5
2,567,148	+		Pf1N1B4_2250	0.53	+1.6
2,567,148	+		Pf1N1B4_2250	0.53	+0.1
2,567,148	+		Pf1N1B4_2250	0.53	-0.0
2,567,148	+		Pf1N1B4_2250	0.53	-0.4
2,567,148	+		Pf1N1B4_2250	0.53	-0.2
2,567,148	+		Pf1N1B4_2250	0.53	-0.3
2,567,148	+		Pf1N1B4_2250	0.53	-0.7
2,567,149	-		Pf1N1B4_2250	0.53	-2.2
2,567,149	-		Pf1N1B4_2250	0.53	+1.0
2,567,149	-		Pf1N1B4_2250	0.53	+0.4
2,567,149	-		Pf1N1B4_2250	0.53	+0.8
2,567,199	+		Pf1N1B4_2250	0.60	+0.8
2,567,199	+		Pf1N1B4_2250	0.60	+0.4
2,567,199	+		Pf1N1B4_2250	0.60	-1.0
2,567,200	-		Pf1N1B4_2250	0.60	+2.1
2,567,409	+		Pf1N1B4_2250	0.87	-1.0
2,567,409	+		Pf1N1B4_2250	0.87	-1.0
2,567,409	+		Pf1N1B4_2250	0.87	-0.2
2,567,671	+		Pf1N1B4_2251	0.20	+1.6
2,567,671	+		Pf1N1B4_2251	0.20	+0.7
2,567,672	-		Pf1N1B4_2251	0.20	-0.4