Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2061

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
2,352,646	+				+0.5
2,352,646	+				-0.7
2,352,647	-				+0.5
2,352,647	-				+0.5
2,352,660	+				-0.8
2,352,660	+				-1.3
2,352,660	+				+0.1
2,352,660	+				+0.3
2,352,661	-				-1.3
2,352,661	-				+0.3
2,352,661	-				+2.5
2,352,661	-				+1.0
2,352,661	-				+0.7
2,352,661	-				-1.5
2,352,661	-				+1.1
2,352,661	-				-0.8
2,352,703	+		Pf1N1B4_2060	0.15	-0.7
2,352,743	-		Pf1N1B4_2060	0.25	-0.3
2,352,854	-		Pf1N1B4_2060	0.51	-1.3
2,353,210	+				-0.5
2,353,211	-				-0.3
2,353,218	+				+2.2
2,353,320	+				+0.5
2,353,396	+				+0.5
2,353,430	+				+0.2
2,353,431	-				+1.1
2,353,431	-				-1.7
2,353,507	+				+0.1
2,353,508	-				-0.6
2,353,512	+				+0.9
2,353,512	+				-0.4
2,353,512	+				-0.2
2,353,512	+				+1.3
2,353,513	-				-0.0
2,353,513	-				-1.2
2,353,640	-				+1.5
2,353,719	+		Pf1N1B4_2061	0.18	-0.8
2,353,719	+		Pf1N1B4_2061	0.18	-1.8
2,353,770	-		Pf1N1B4_2061	0.29	-0.3
2,353,770	-		Pf1N1B4_2061	0.29	-0.8
2,353,933	+		Pf1N1B4_2061	0.67	+0.9
2,353,933	+		Pf1N1B4_2061	0.67	-0.5
2,353,934	-		Pf1N1B4_2061	0.67	-0.6
2,353,934	-		Pf1N1B4_2061	0.67	+0.5
2,353,985	+		Pf1N1B4_2061	0.79	+0.5
2,353,986	-		Pf1N1B4_2061	0.79	-0.8
2,354,057	+				-1.0
2,354,141	-				+1.1
2,354,360	+		Pf1N1B4_2062	0.41	+0.4
2,354,360	+		Pf1N1B4_2062	0.41	-1.1
2,354,360	+		Pf1N1B4_2062	0.41	-0.3
2,354,361	-		Pf1N1B4_2062	0.41	-0.5
2,354,361	-		Pf1N1B4_2062	0.41	+0.2
2,354,361	-		Pf1N1B4_2062	0.41	+0.3
2,354,361	-		Pf1N1B4_2062	0.41	+0.3
2,354,361	-		Pf1N1B4_2062	0.41	+0.3
2,354,361	-		Pf1N1B4_2062	0.41	+0.2
2,354,361	-		Pf1N1B4_2062	0.41	+0.7
2,354,361	-		Pf1N1B4_2062	0.41	+0.1
2,354,468	+		Pf1N1B4_2062	0.63	-1.1
2,354,468	+		Pf1N1B4_2062	0.63	-0.2
2,354,468	+		Pf1N1B4_2062	0.63	+0.1
2,354,468	+		Pf1N1B4_2062	0.63	-0.9
2,354,468	+		Pf1N1B4_2062	0.63	+0.1
2,354,468	+		Pf1N1B4_2062	0.63	+2.2
2,354,469	-		Pf1N1B4_2062	0.63	-1.1
2,354,469	-		Pf1N1B4_2062	0.63	+0.5
2,354,469	-		Pf1N1B4_2062	0.63	-2.8
2,354,637	+				-0.3
2,354,672	-				-1.5
2,354,884	+				-0.2
2,354,885	-				+0.3
2,354,950	+				+0.9
2,354,965	+				-1.7
2,354,965	+				-1.8
2,354,966	-				-0.8
2,354,966	-				-1.1
2,354,966	-				+0.5
2,354,980	+				+1.5
2,354,980	+				-0.1
2,354,980	+				-0.3
2,354,980	+				-1.3
2,354,980	+				+0.5
2,354,980	+				+0.6
2,354,980	+				-0.3
2,354,981	-				+0.7
2,354,981	-				+0.9
2,354,981	-				+0.5
2,354,981	-				+2.1
2,354,981	-				-1.3
2,354,984	-				+0.9