Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1847

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
2,118,720	+		Pf1N1B4_1846	0.24	-0.7
2,118,720	+		Pf1N1B4_1846	0.24	-1.1
2,118,720	+		Pf1N1B4_1846	0.24	+1.5
2,118,721	-		Pf1N1B4_1846	0.24	-0.8
2,118,793	+		Pf1N1B4_1846	0.39	+0.2
2,118,820	-		Pf1N1B4_1846	0.44	-1.6
2,118,868	+		Pf1N1B4_1846	0.54	+1.5
2,118,869	-		Pf1N1B4_1846	0.54	-1.5
2,118,869	-		Pf1N1B4_1846	0.54	-0.5
2,118,920	+		Pf1N1B4_1846	0.65	+0.1
2,118,920	+		Pf1N1B4_1846	0.65	-0.3
2,118,920	+		Pf1N1B4_1846	0.65	+0.2
2,118,920	+		Pf1N1B4_1846	0.65	+1.4
2,118,921	-		Pf1N1B4_1846	0.65	-1.9
2,118,921	-		Pf1N1B4_1846	0.65	+0.1
2,118,921	-		Pf1N1B4_1846	0.65	-0.8
2,118,921	-		Pf1N1B4_1846	0.65	-0.5
2,118,921	-		Pf1N1B4_1846	0.65	+0.5
2,118,921	-		Pf1N1B4_1846	0.65	-0.6
2,118,921	-		Pf1N1B4_1846	0.65	-0.2
2,118,921	-		Pf1N1B4_1846	0.65	-1.2
2,118,921	-		Pf1N1B4_1846	0.65	-1.5
2,118,921	-		Pf1N1B4_1846	0.65	+0.5
2,118,962	+		Pf1N1B4_1846	0.73	-0.4
2,118,962	+		Pf1N1B4_1846	0.73	+1.5
2,118,962	+		Pf1N1B4_1846	0.73	-0.8
2,118,962	+		Pf1N1B4_1846	0.73	+1.4
2,118,962	+		Pf1N1B4_1846	0.73	+0.7
2,118,963	-		Pf1N1B4_1846	0.73	+1.1
2,118,963	-		Pf1N1B4_1846	0.73	+1.7
2,118,963	-		Pf1N1B4_1846	0.73	-2.3
2,118,963	-		Pf1N1B4_1846	0.73	+0.7
2,118,963	-		Pf1N1B4_1846	0.73	+0.8
2,118,963	-		Pf1N1B4_1846	0.73	-0.4
2,118,963	-		Pf1N1B4_1846	0.73	+0.3
2,118,963	-		Pf1N1B4_1846	0.73	+0.2
2,118,963	-		Pf1N1B4_1846	0.73	-0.9
2,118,963	-		Pf1N1B4_1846	0.73	+1.0
2,118,963	-		Pf1N1B4_1846	0.73	-0.5
2,118,963	-		Pf1N1B4_1846	0.73	+0.5
2,119,022	+		Pf1N1B4_1846	0.85	-1.5
2,119,022	+		Pf1N1B4_1846	0.85	-0.4
2,119,022	+		Pf1N1B4_1846	0.85	-0.8
2,119,226	+				+1.2
2,119,227	-				-0.8
2,119,227	-				-0.8
2,119,227	-				+0.3
2,119,228	+				+1.5
2,119,228	+				+0.5
2,119,228	+				+0.9
2,119,228	+				-0.5
2,119,228	+				-0.5
2,119,228	+				+0.4
2,119,228	+				-0.7
2,119,228	+				+0.9
2,119,228	+				-0.8
2,119,228	+				+0.5
2,119,228	+				+0.5
2,119,228	+				-1.7
2,119,228	+				-0.1
2,119,228	+				-1.3
2,119,228	+				+0.9
2,119,228	+				-0.5
2,119,228	+				+0.5
2,119,228	+				+1.3
2,119,228	+				+0.5
2,119,229	-				-0.1
2,119,229	-				+0.7
2,119,229	-				+0.6
2,119,229	-				-0.3
2,119,229	-				-0.9
2,119,229	-				-0.8
2,119,229	-				-1.4
2,119,229	-				+0.2
2,119,229	-				+1.0
2,119,230	+				+0.1
2,119,230	+				-0.3
2,119,230	+				+2.2
2,119,231	-				+0.3
2,119,397	+				+2.1
2,119,398	-				-0.1
2,119,496	-				+0.1
2,119,511	+				+1.5
2,119,512	-				+0.1
2,119,524	+				+0.6
2,119,525	-		Pf1N1B4_1847	0.10	+0.1
2,119,525	-		Pf1N1B4_1847	0.10	+0.8
2,119,607	+		Pf1N1B4_1847	0.47	+1.5
2,119,608	-		Pf1N1B4_1847	0.47	+1.5
2,119,608	-		Pf1N1B4_1847	0.47	+0.5
2,119,608	-		Pf1N1B4_1847	0.47	+0.5
2,119,608	-		Pf1N1B4_1847	0.47	+1.7
2,119,608	-		Pf1N1B4_1847	0.47	+0.1
2,119,608	-		Pf1N1B4_1847	0.47	-1.5
2,119,646	+				+1.5
2,119,646	+		Pf1N1B4_1847	0.64	+0.5
2,119,646	+		Pf1N1B4_1847	0.64	+1.1
2,119,646	+		Pf1N1B4_1847	0.64	-1.9
2,119,646	+		Pf1N1B4_1847	0.64	-0.7
2,119,647	-		Pf1N1B4_1847	0.64	+1.2
2,119,647	-		Pf1N1B4_1847	0.64	-0.9
2,119,647	-		Pf1N1B4_1847	0.64	+1.3
2,119,647	-		Pf1N1B4_1847	0.64	-0.9
2,119,647	-		Pf1N1B4_1847	0.64	+0.4
2,119,647	-		Pf1N1B4_1847	0.64	+1.7
2,119,651	-		Pf1N1B4_1847	0.66	-0.1
2,119,679	+		Pf1N1B4_1847	0.79	-1.5
2,119,679	+		Pf1N1B4_1847	0.79	-1.3
2,119,680	-		Pf1N1B4_1847	0.79	-0.3
2,119,770	-				+0.9
2,119,822	+				+0.0
2,119,823	-				+0.9
2,119,860	+				-1.1
2,119,870	-				+0.8
2,119,893	-				+1.4
2,119,922	+				-0.5
2,119,933	+				+1.9
2,119,933	+				+1.5
2,119,937	-				-0.5
2,120,009	+				+0.5
2,120,010	-				-2.1
2,120,018	-				-0.4
2,120,033	-				+0.5
2,120,033	-				+1.5
2,120,135	-				-1.0
2,120,205	+		Pf1N1B4_1848	0.16	+0.5
2,120,205	+		Pf1N1B4_1848	0.16	+1.1
2,120,205	+		Pf1N1B4_1848	0.16	+0.9
2,120,206	-		Pf1N1B4_1848	0.16	+1.0
2,120,206	-		Pf1N1B4_1848	0.16	-0.9
2,120,206	-		Pf1N1B4_1848	0.16	+0.3
2,120,206	-		Pf1N1B4_1848	0.16	-0.1
2,120,272	+		Pf1N1B4_1848	0.22	-0.1
2,120,272	+		Pf1N1B4_1848	0.22	+1.1
2,120,272	+		Pf1N1B4_1848	0.22	+0.8
2,120,272	+		Pf1N1B4_1848	0.22	+1.2
2,120,272	+		Pf1N1B4_1848	0.22	-0.4
2,120,272	+		Pf1N1B4_1848	0.22	-1.3
2,120,272	+		Pf1N1B4_1848	0.22	+0.9
2,120,272	+		Pf1N1B4_1848	0.22	+1.0
2,120,272	+		Pf1N1B4_1848	0.22	+1.5
2,120,273	-		Pf1N1B4_1848	0.22	-0.5
2,120,273	-		Pf1N1B4_1848	0.22	+1.2
2,120,273	-		Pf1N1B4_1848	0.22	+0.1
2,120,273	-		Pf1N1B4_1848	0.22	+0.4
2,120,273	-		Pf1N1B4_1848	0.22	-0.3
2,120,273	-		Pf1N1B4_1848	0.22	-0.1
2,120,273	-		Pf1N1B4_1848	0.22	+0.3
2,120,273	-		Pf1N1B4_1848	0.22	+0.6
2,120,273	-		Pf1N1B4_1848	0.22	-2.9
2,120,273	-		Pf1N1B4_1848	0.22	-0.1
2,120,273	-		Pf1N1B4_1848	0.22	-0.2
2,120,273	-		Pf1N1B4_1848	0.22	+0.1
2,120,273	-		Pf1N1B4_1848	0.22	-1.1
2,120,273	-		Pf1N1B4_1848	0.22	+2.1
2,120,273	-		Pf1N1B4_1848	0.22	-0.0
2,120,273	-		Pf1N1B4_1848	0.22	-1.3
2,120,273	-		Pf1N1B4_1848	0.22	+1.5
2,120,273	-		Pf1N1B4_1848	0.22	+0.5
2,120,273	-		Pf1N1B4_1848	0.22	-1.1
2,120,273	-		Pf1N1B4_1848	0.22	+0.2
2,120,273	-		Pf1N1B4_1848	0.22	-0.0
2,120,273	-		Pf1N1B4_1848	0.22	+1.0
2,120,273	-		Pf1N1B4_1848	0.22	-0.1
2,120,273	-		Pf1N1B4_1848	0.22	-0.6
2,120,273	-		Pf1N1B4_1848	0.22	+0.4
2,120,273	-		Pf1N1B4_1848	0.22	+1.1
2,120,273	-				+0.5
2,120,273	-		Pf1N1B4_1848	0.22	-1.0
2,120,273	-		Pf1N1B4_1848	0.22	+2.1
2,120,273	-		Pf1N1B4_1848	0.22	-0.3
2,120,273	-		Pf1N1B4_1848	0.22	-1.0
2,120,273	-		Pf1N1B4_1848	0.22	-0.5
2,120,278	+		Pf1N1B4_1848	0.23	+0.4
2,120,278	+		Pf1N1B4_1848	0.23	-0.9
2,120,278	+		Pf1N1B4_1848	0.23	+1.5
2,120,278	+		Pf1N1B4_1848	0.23	-0.9
2,120,279	-		Pf1N1B4_1848	0.23	-0.4
2,120,279	-		Pf1N1B4_1848	0.23	-1.0
2,120,279	-		Pf1N1B4_1848	0.23	+0.9
2,120,300	-		Pf1N1B4_1848	0.25	-0.3
2,120,437	+		Pf1N1B4_1848	0.38	-1.1
2,120,472	+		Pf1N1B4_1848	0.41	-0.9
2,120,472	+		Pf1N1B4_1848	0.41	+1.2
2,120,472	+		Pf1N1B4_1848	0.41	+0.1
2,120,524	-		Pf1N1B4_1848	0.46	+0.6
2,120,524	-		Pf1N1B4_1848	0.46	-1.1
2,120,591	+		Pf1N1B4_1848	0.52	-0.4
2,120,632	-		Pf1N1B4_1848	0.56	+0.2