Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1756

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
2,003,972	+				-1.4
2,004,041	-				+0.9
2,004,066	+				-0.0
2,004,066	+				+0.4
2,004,066	+				-0.1
2,004,067	-				-0.4
2,004,067	-				-1.2
2,004,068	+				-0.6
2,004,068	+				+0.1
2,004,068	+				-0.1
2,004,068	+				+3.4
2,004,068	+				+0.9
2,004,069	-				-0.6
2,004,069	-				+0.1
2,004,069	-				-0.1
2,004,069	-				+1.4
2,004,069	-				-1.4
2,004,069	-				-0.1
2,004,091	+				-0.2
2,004,091	+				+1.0
2,004,091	+				-1.5
2,004,091	+				+0.7
2,004,092	-				-0.4
2,004,092	-				-0.5
2,004,092	-				-0.4
2,004,092	-				+0.2
2,004,092	-				-0.6
2,004,269	+		Pf1N1B4_1755	0.25	-0.1
2,004,269	+		Pf1N1B4_1755	0.25	+1.4
2,004,269	+		Pf1N1B4_1755	0.25	-1.1
2,004,270	-		Pf1N1B4_1755	0.25	-0.6
2,004,270	-		Pf1N1B4_1755	0.25	-1.7
2,004,347	+		Pf1N1B4_1755	0.33	-0.7
2,004,347	+		Pf1N1B4_1755	0.33	-0.0
2,004,347	+		Pf1N1B4_1755	0.33	+1.4
2,004,348	-		Pf1N1B4_1755	0.33	-1.0
2,004,348	-		Pf1N1B4_1755	0.33	+0.3
2,004,525	+		Pf1N1B4_1755	0.52	+0.7
2,004,748	-		Pf1N1B4_1755	0.75	-1.1
2,004,748	-		Pf1N1B4_1755	0.75	-0.6
2,004,748	-		Pf1N1B4_1755	0.75	+0.3
2,005,082	+		Pf1N1B4_1756	0.14	-0.3
2,005,432	+		Pf1N1B4_1756	0.59	-1.6
2,005,432	+		Pf1N1B4_1756	0.59	-0.4
2,005,639	+		Pf1N1B4_1756	0.85	-0.6
2,005,639	+		Pf1N1B4_1756	0.85	+0.0
2,005,640	-		Pf1N1B4_1756	0.85	-0.9
2,005,640	-		Pf1N1B4_1756	0.85	-2.3
2,005,642	+		Pf1N1B4_1756	0.86	-0.8
2,005,642	+		Pf1N1B4_1756	0.86	-0.9
2,006,341	+				-0.3
2,006,485	-				-0.1
2,006,485	-				+1.5
2,006,701	+		Pf1N1B4_1758	0.24	+0.4
2,006,701	+		Pf1N1B4_1758	0.24	-1.1
2,006,702	-		Pf1N1B4_1758	0.24	-0.1
2,006,702	-		Pf1N1B4_1758	0.24	-0.1
2,006,715	+		Pf1N1B4_1758	0.25	+0.1
2,006,716	-		Pf1N1B4_1758	0.25	+0.4