Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1683

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
1,929,051	+		Pf1N1B4_1681	0.83	-2.5
1,929,174	+		Pf1N1B4_1681	0.88	-0.6
1,929,174	+		Pf1N1B4_1681	0.88	-0.8
1,929,174	+		Pf1N1B4_1681	0.88	+2.4
1,929,174	+		Pf1N1B4_1681	0.88	+0.2
1,929,174	+		Pf1N1B4_1681	0.88	+0.7
1,929,174	+				+0.4
1,929,175	-		Pf1N1B4_1681	0.88	-0.9
1,929,175	-		Pf1N1B4_1681	0.88	-0.6
1,929,175	-		Pf1N1B4_1681	0.88	+0.3
1,929,175	-				-0.2
1,929,334	+				-0.0
1,929,574	+		Pf1N1B4_1682	0.29	-1.1
1,929,574	+		Pf1N1B4_1682	0.29	-0.5
1,929,574	+				-0.2
1,929,574	+		Pf1N1B4_1682	0.29	+0.6
1,929,574	+		Pf1N1B4_1682	0.29	+1.4
1,929,574	+		Pf1N1B4_1682	0.29	+1.4
1,929,574	+		Pf1N1B4_1682	0.29	-3.5
1,929,575	-		Pf1N1B4_1682	0.29	+0.4
1,929,575	-		Pf1N1B4_1682	0.29	-0.8
1,929,575	-		Pf1N1B4_1682	0.29	-0.5
1,929,575	-				+3.7
1,929,575	-		Pf1N1B4_1682	0.29	+2.0
1,929,575	-		Pf1N1B4_1682	0.29	-0.4
1,929,575	-		Pf1N1B4_1682	0.29	-0.4
1,929,575	-		Pf1N1B4_1682	0.29	+0.4
1,929,639	+				+2.0
1,929,639	+		Pf1N1B4_1682	0.42	-1.9
1,929,639	+		Pf1N1B4_1682	0.42	-0.9
1,929,639	+		Pf1N1B4_1682	0.42	-1.4
1,929,639	+		Pf1N1B4_1682	0.42	-0.4
1,929,639	+		Pf1N1B4_1682	0.42	-0.8
1,929,639	+		Pf1N1B4_1682	0.42	-0.9
1,929,639	+		Pf1N1B4_1682	0.42	-1.1
1,929,640	-		Pf1N1B4_1682	0.42	+1.4
1,929,640	-		Pf1N1B4_1682	0.42	-1.3
1,929,714	+		Pf1N1B4_1682	0.57	-1.2
1,929,714	+		Pf1N1B4_1682	0.57	+0.3
1,929,714	+		Pf1N1B4_1682	0.57	-0.7
1,929,715	-		Pf1N1B4_1682	0.57	+0.8
1,929,715	-		Pf1N1B4_1682	0.57	+1.0
1,929,776	-		Pf1N1B4_1682	0.70	+1.0
1,929,852	+		Pf1N1B4_1682	0.85	-0.2
1,929,852	+		Pf1N1B4_1682	0.85	-0.6
1,929,852	+		Pf1N1B4_1682	0.85	-0.1
1,929,853	-		Pf1N1B4_1682	0.85	+1.2
1,929,913	-				+0.4
1,930,004	+				-0.4
1,930,182	+		Pf1N1B4_1683	0.22	+0.1
1,930,388	+		Pf1N1B4_1683	0.46	-0.0
1,930,389	-		Pf1N1B4_1683	0.46	-1.0
1,930,493	+		Pf1N1B4_1683	0.59	-0.9
1,930,967	-				-2.1
1,930,967	-				-0.6
1,931,298	+		Pf1N1B4_1684	0.32	-0.5
1,931,299	-		Pf1N1B4_1684	0.32	+0.8
1,931,299	-		Pf1N1B4_1684	0.32	-0.5
1,931,299	-		Pf1N1B4_1684	0.32	-0.9
1,931,299	-		Pf1N1B4_1684	0.32	+0.2
1,931,299	-		Pf1N1B4_1684	0.32	+1.1
1,931,299	-		Pf1N1B4_1684	0.32	-0.6
1,931,299	-		Pf1N1B4_1684	0.32	-1.9
1,931,302	+		Pf1N1B4_1684	0.32	-1.5
1,931,302	+		Pf1N1B4_1684	0.32	-0.9
1,931,302	+		Pf1N1B4_1684	0.32	-2.1
1,931,302	+		Pf1N1B4_1684	0.32	+0.6
1,931,302	+		Pf1N1B4_1684	0.32	+0.6
1,931,303	-		Pf1N1B4_1684	0.33	-1.2
1,931,413	+		Pf1N1B4_1684	0.43	-1.2
1,931,414	-		Pf1N1B4_1684	0.43	-0.7
1,931,414	-		Pf1N1B4_1684	0.43	-1.6
1,931,414	-		Pf1N1B4_1684	0.43	+1.4
1,931,440	-				-0.9
1,931,440	-		Pf1N1B4_1684	0.46	+1.4
1,931,440	-		Pf1N1B4_1684	0.46	-2.4
1,931,491	+		Pf1N1B4_1684	0.51	-0.2
1,931,502	-		Pf1N1B4_1684	0.52	+1.8
1,931,509	+		Pf1N1B4_1684	0.52	-1.4
1,931,509	+		Pf1N1B4_1684	0.52	+0.4
1,931,509	+		Pf1N1B4_1684	0.52	-1.2
1,931,509	+		Pf1N1B4_1684	0.52	-0.7
1,931,509	+		Pf1N1B4_1684	0.52	-0.7
1,931,509	+		Pf1N1B4_1684	0.52	-0.5
1,931,509	+		Pf1N1B4_1684	0.52	-0.4
1,931,509	+		Pf1N1B4_1684	0.52	-0.9
1,931,510	-		Pf1N1B4_1684	0.53	-1.6
1,931,510	-		Pf1N1B4_1684	0.53	-0.6
1,931,510	-		Pf1N1B4_1684	0.53	+0.8
1,931,510	-		Pf1N1B4_1684	0.53	-1.6
1,931,593	+		Pf1N1B4_1684	0.61	+1.0
1,931,594	-		Pf1N1B4_1684	0.61	+0.1
1,931,604	+		Pf1N1B4_1684	0.62	-0.2
1,931,604	+		Pf1N1B4_1684	0.62	+1.4
1,931,605	-		Pf1N1B4_1684	0.62	+1.0
1,931,605	-		Pf1N1B4_1684	0.62	+1.9
1,931,605	-		Pf1N1B4_1684	0.62	+0.1
1,931,605	-		Pf1N1B4_1684	0.62	-1.2
1,931,608	+		Pf1N1B4_1684	0.62	+0.3
1,931,628	+		Pf1N1B4_1684	0.64	-0.9
1,931,628	+		Pf1N1B4_1684	0.64	-0.2
1,931,628	+		Pf1N1B4_1684	0.64	-0.9
1,931,629	-		Pf1N1B4_1684	0.64	+0.0
1,931,629	-		Pf1N1B4_1684	0.64	-1.2
1,931,629	-		Pf1N1B4_1684	0.64	-1.4
1,931,656	+		Pf1N1B4_1684	0.67	-1.9
1,931,656	+		Pf1N1B4_1684	0.67	+1.7
1,931,656	+		Pf1N1B4_1684	0.67	-0.0
1,931,656	+		Pf1N1B4_1684	0.67	+0.2
1,931,657	-		Pf1N1B4_1684	0.67	+0.4
1,931,657	-		Pf1N1B4_1684	0.67	+0.3
1,931,657	-		Pf1N1B4_1684	0.67	+0.1
1,931,657	-		Pf1N1B4_1684	0.67	-1.0
1,931,807	-		Pf1N1B4_1684	0.81	-0.6
1,931,807	-		Pf1N1B4_1684	0.81	+1.4