Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1630

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
1,872,627	-				+0.4
1,872,765	+				-1.8
1,872,765	+				+0.4
1,872,765	+				+1.8
1,872,787	+				-1.2
1,872,788	-				-1.0
1,872,788	-				-0.1
1,872,788	-				-1.0
1,872,788	-				-0.5
1,872,788	-				+0.2
1,872,788	-				-1.1
1,872,788	-				-0.6
1,872,788	-				-1.1
1,872,788	-				-0.8
1,872,788	-				-0.4
1,872,788	-				-0.1
1,872,788	-				-0.5
1,872,788	-				+0.5
1,872,788	-				-0.9
1,872,788	-				-0.9
1,872,788	-				-0.9
1,872,788	-				-0.8
1,872,788	-				+0.8
1,872,788	-				+2.0
1,872,788	-				+0.1
1,872,788	-				-0.8
1,872,788	-				-0.4
1,872,788	-				-0.8
1,872,790	+				+0.5
1,872,790	+				-0.2
1,872,790	+				+0.4
1,872,791	-				+0.5
1,872,791	-				+0.1
1,872,791	-				+0.1
1,872,791	-				+0.0
1,872,791	-				-0.2
1,872,791	-				+0.5
1,872,791	-				-0.0
1,872,791	-				+0.4
1,872,791	-				-1.3
1,872,791	-				-0.1
1,872,791	-				+1.4
1,872,791	-				-0.4
1,872,791	-				+2.1
1,872,791	-				-1.4
1,872,791	-				+0.1
1,872,791	-				-0.9
1,872,791	-				-0.1
1,872,791	-				+0.7
1,872,791	-				-0.2
1,872,791	-				+0.1
1,872,791	-				-0.0
1,872,791	-				+0.1
1,872,791	-				-0.7
1,872,791	-				-0.1
1,872,791	-				-0.2
1,872,791	-				+2.0
1,872,794	-				-2.0
1,872,794	-				+0.2
1,872,794	-				-0.0
1,872,794	-				+0.7
1,872,794	-				+0.1
1,872,794	-				+0.5
1,872,794	-				+1.4
1,872,794	-				+0.3
1,872,794	-				+0.2
1,872,794	-				+0.7
1,872,794	-				-0.0
1,872,794	-				+1.1
1,872,794	-				-0.3
1,872,794	-				-0.7
1,872,794	-				-1.4
1,872,827	-				-0.7
1,872,852	-				+1.4
1,872,852	-				-2.2
1,872,947	+				-2.4
1,872,948	-				-0.6
1,872,961	-				-0.3
1,872,961	-				+1.4
1,872,978	-				+0.8
1,872,993	+				-0.2
1,873,067	-				+2.4
1,873,067	-				+0.1
1,873,259	+		Pf1N1B4_1629	0.57	+0.1
1,873,259	+		Pf1N1B4_1629	0.57	+0.6
1,873,259	+		Pf1N1B4_1629	0.57	-0.2
1,873,259	+		Pf1N1B4_1629	0.57	+1.0
1,873,259	+		Pf1N1B4_1629	0.57	-0.9
1,873,260	-		Pf1N1B4_1629	0.57	+0.4
1,873,260	-		Pf1N1B4_1629	0.57	-0.0
1,873,260	-		Pf1N1B4_1629	0.57	+1.8
1,873,260	-		Pf1N1B4_1629	0.57	+1.1
1,873,260	-		Pf1N1B4_1629	0.57	+0.9
1,873,260	-		Pf1N1B4_1629	0.57	+0.1
1,873,465	-				-0.5
1,873,466	+				-0.9
1,873,466	+				-0.2
1,873,466	+				+0.4
1,873,467	-				+0.8
1,873,467	-				-1.2
1,873,467	-				+0.1
1,873,467	-				-0.4
1,873,467	-				-0.7
1,873,467	-				-0.4
1,873,497	+				+0.6
1,873,497	+				-1.9
1,873,497	+				-0.9
1,873,497	+				-1.6
1,873,497	+				+0.4
1,873,497	+				+1.7
1,873,497	+				-0.6
1,873,497	+				-0.5
1,873,497	+				-0.6
1,873,498	-				-0.5
1,873,498	-				+0.4
1,873,498	-				+0.4
1,873,498	-				+0.1
1,873,498	-				+1.4
1,873,498	-				-1.8
1,873,543	+				-1.8
1,873,543	+				+0.4
1,873,544	-				-0.2
1,873,544	-				+1.2
1,873,544	-				-1.7
1,873,614	+				-0.2
1,873,614	+				-0.5
1,873,614	+				-0.2
1,873,614	+				+1.1
1,873,615	-				-0.0
1,873,615	-				-0.7
1,873,615	-				+0.4
1,873,615	-				-0.4
1,873,616	+				-0.7
1,873,617	-				+0.1
1,873,617	-				-1.2
1,874,062	-		Pf1N1B4_1630	0.25	-1.9
1,874,062	-		Pf1N1B4_1630	0.25	-1.6
1,874,245	-		Pf1N1B4_1630	0.33	-0.2
1,874,245	-		Pf1N1B4_1630	0.33	-0.6
1,874,710	-		Pf1N1B4_1630	0.54	-0.9
1,874,710	-		Pf1N1B4_1630	0.54	-1.6
1,875,010	-		Pf1N1B4_1630	0.67	-1.1
1,875,010	-		Pf1N1B4_1630	0.67	+0.8
1,875,036	-		Pf1N1B4_1630	0.68	-0.2
1,875,247	+		Pf1N1B4_1630	0.78	-1.4
1,875,248	-		Pf1N1B4_1630	0.78	-1.0
1,875,893	+		Pf1N1B4_1631	0.14	+0.4
1,875,893	+		Pf1N1B4_1631	0.14	-2.1
1,875,893	+		Pf1N1B4_1631	0.14	+0.8
1,875,893	+		Pf1N1B4_1631	0.14	+0.9
1,875,893	+		Pf1N1B4_1631	0.14	-1.3
1,875,893	+		Pf1N1B4_1631	0.14	-0.2
1,875,894	-		Pf1N1B4_1631	0.14	+1.4
1,875,894	-		Pf1N1B4_1631	0.14	-0.5
1,875,894	-		Pf1N1B4_1631	0.14	+0.2
1,875,989	+				+0.4
1,875,989	+		Pf1N1B4_1631	0.23	+1.6
1,875,989	+		Pf1N1B4_1631	0.23	+0.6
1,875,989	+		Pf1N1B4_1631	0.23	-0.4
1,875,989	+		Pf1N1B4_1631	0.23	+0.1
1,875,989	+		Pf1N1B4_1631	0.23	-0.2
1,876,255	+		Pf1N1B4_1631	0.48	-2.4
1,876,262	+		Pf1N1B4_1631	0.49	+0.4
1,876,262	+		Pf1N1B4_1631	0.49	-2.1
1,876,281	-		Pf1N1B4_1631	0.50	+1.8
1,876,281	-		Pf1N1B4_1631	0.50	-1.5
1,876,281	-		Pf1N1B4_1631	0.50	+1.1
1,876,642	-		Pf1N1B4_1631	0.84	-1.9
1,876,642	-		Pf1N1B4_1631	0.84	-0.9
1,876,712	+				+1.4
1,876,712	+				+0.5
1,876,712	+				-0.1
1,876,713	-				+0.6
1,876,713	-				-0.6
1,876,713	-				+1.2
1,876,713	-				-1.5
1,876,714	+				+0.5
1,876,715	-				+1.8
1,876,715	-				+2.0
1,876,715	-				-0.8
1,876,715	-				+0.1