Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1608

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
1,852,645	-				-0.8
1,852,645	-				+0.2
1,852,687	+				-0.0
1,852,687	+				+0.4
1,852,688	-				+0.6
1,852,688	-				+0.7
1,852,739	+				-0.5
1,852,740	-				+1.4
1,852,740	-				-1.8
1,852,788	+				-1.4
1,852,789	-				-1.9
1,852,789	-				-0.1
1,852,891	+				-2.1
1,852,901	+				-0.2
1,852,901	+				+0.4
1,852,901	+				+0.2
1,852,902	-				-0.3
1,852,902	-				-0.6
1,852,902	-				+0.8
1,852,902	-				+0.1
1,852,902	-				+0.8
1,852,902	-				-1.6
1,852,902	-				-0.4
1,852,902	-				-1.6
1,852,902	-				+0.5
1,853,006	+		Pf1N1B4_1607	0.28	+0.5
1,853,006	+				+0.4
1,853,006	+		Pf1N1B4_1607	0.28	+1.6
1,853,006	+		Pf1N1B4_1607	0.28	-0.5
1,853,006	+		Pf1N1B4_1607	0.28	+2.1
1,853,006	+		Pf1N1B4_1607	0.28	+1.0
1,853,006	+		Pf1N1B4_1607	0.28	-0.6
1,853,006	+		Pf1N1B4_1607	0.28	-1.9
1,853,006	+		Pf1N1B4_1607	0.28	-0.6
1,853,006	+		Pf1N1B4_1607	0.28	+0.4
1,853,006	+		Pf1N1B4_1607	0.28	+0.4
1,853,006	+		Pf1N1B4_1607	0.28	-0.9
1,853,006	+		Pf1N1B4_1607	0.28	+2.6
1,853,006	+		Pf1N1B4_1607	0.28	-0.3
1,853,007	-		Pf1N1B4_1607	0.28	-0.3
1,853,007	-		Pf1N1B4_1607	0.28	+0.3
1,853,007	-		Pf1N1B4_1607	0.28	-1.4
1,853,007	-		Pf1N1B4_1607	0.28	-0.1
1,853,007	-		Pf1N1B4_1607	0.28	+0.6
1,853,007	-		Pf1N1B4_1607	0.28	-1.6
1,853,007	-		Pf1N1B4_1607	0.28	-1.9
1,853,007	-		Pf1N1B4_1607	0.28	+0.1
1,853,007	-		Pf1N1B4_1607	0.28	-0.1
1,853,007	-		Pf1N1B4_1607	0.28	+0.3
1,853,007	-		Pf1N1B4_1607	0.28	-2.5
1,853,007	-		Pf1N1B4_1607	0.28	-0.2
1,853,007	-		Pf1N1B4_1607	0.28	+0.4
1,853,007	-		Pf1N1B4_1607	0.28	-0.6
1,853,007	-		Pf1N1B4_1607	0.28	+0.2
1,853,007	-		Pf1N1B4_1607	0.28	+0.2
1,853,007	-		Pf1N1B4_1607	0.28	+0.7
1,853,007	-		Pf1N1B4_1607	0.28	+0.9
1,853,007	-		Pf1N1B4_1607	0.28	-0.4
1,853,007	-		Pf1N1B4_1607	0.28	+0.2
1,853,007	-		Pf1N1B4_1607	0.28	+0.6
1,853,007	-		Pf1N1B4_1607	0.28	+0.6
1,853,007	-		Pf1N1B4_1607	0.28	-1.8
1,853,007	-		Pf1N1B4_1607	0.28	-0.2
1,853,009	-		Pf1N1B4_1607	0.29	-0.2
1,853,009	-		Pf1N1B4_1607	0.29	-0.1
1,853,009	-		Pf1N1B4_1607	0.29	+2.6
1,853,009	-		Pf1N1B4_1607	0.29	-0.0
1,853,009	-		Pf1N1B4_1607	0.29	+0.2
1,853,026	-		Pf1N1B4_1607	0.36	+0.4
1,853,026	-		Pf1N1B4_1607	0.36	+0.4
1,853,026	-				+0.4
1,853,026	-		Pf1N1B4_1607	0.36	-1.4
1,853,062	+		Pf1N1B4_1607	0.50	+0.8
1,853,063	-		Pf1N1B4_1607	0.51	+1.1
1,853,098	+		Pf1N1B4_1607	0.65	+0.8
1,853,099	-		Pf1N1B4_1607	0.65	-0.6
1,853,140	+		Pf1N1B4_1607	0.82	-0.1
1,853,141	-		Pf1N1B4_1607	0.82	-0.1
1,853,141	-		Pf1N1B4_1607	0.82	-1.6
1,853,141	-		Pf1N1B4_1607	0.82	+0.9
1,853,141	-		Pf1N1B4_1607	0.82	+1.9
1,853,141	-		Pf1N1B4_1607	0.82	+0.4
1,853,150	+		Pf1N1B4_1607	0.86	+0.2
1,853,150	+		Pf1N1B4_1607	0.86	-0.5
1,853,150	+		Pf1N1B4_1607	0.86	+1.6
1,853,150	+		Pf1N1B4_1607	0.86	-0.0
1,853,151	-		Pf1N1B4_1607	0.86	+0.1
1,853,151	-		Pf1N1B4_1607	0.86	+1.1
1,853,151	-		Pf1N1B4_1607	0.86	-0.5
1,853,151	-		Pf1N1B4_1607	0.86	+0.4
1,853,151	-		Pf1N1B4_1607	0.86	+0.1
1,853,151	-		Pf1N1B4_1607	0.86	+1.4
1,853,151	-		Pf1N1B4_1607	0.86	+0.6
1,853,151	-		Pf1N1B4_1607	0.86	-0.0
1,853,151	-		Pf1N1B4_1607	0.86	-1.5
1,853,167	+				-0.2
1,853,183	+				-0.8
1,853,183	+				+1.4
1,853,183	+				-0.3
1,853,184	-				+0.1
1,853,184	-				+1.0
1,853,224	+				+0.4
1,853,224	+				+1.0
1,853,224	+				+1.0
1,853,225	-				-1.8
1,853,225	-				-1.2
1,853,225	-				-0.7
1,853,227	+				-0.1
1,853,227	+				+0.6
1,853,227	+				-0.4
1,853,227	+				-0.4
1,853,227	+				-0.4
1,853,227	+				-0.6
1,853,228	-				+0.4
1,853,228	-				-2.1
1,853,228	-				+1.1
1,853,228	-				+1.0
1,853,228	-				-0.4
1,853,228	-				-0.9
1,853,228	-				+1.8
1,853,228	-				+1.4
1,853,228	-				-0.9
1,853,228	-				-0.2
1,853,228	-				-1.9
1,853,228	-				-0.6
1,853,228	-				-0.4
1,853,233	+				-1.0
1,853,233	+				-0.0
1,853,233	+				-1.9
1,853,233	+				+0.2
1,853,234	-				+1.4
1,853,234	-				-0.0
1,853,234	-				+0.1
1,853,271	+				-0.2
1,853,271	+				+0.1
1,853,272	-				-0.2
1,853,272	-				+0.6
1,853,277	+				-0.9
1,853,277	+				-0.6
1,853,277	+				+2.5
1,853,277	+				-1.2
1,853,277	+				+0.5
1,853,277	+				-2.5
1,853,277	+				-1.3
1,853,277	+				+0.7
1,853,277	+				+0.8
1,853,277	+				-1.6
1,853,278	-				-0.1
1,853,278	-				+1.4
1,853,278	-				+1.4
1,853,278	-				-0.1
1,853,278	-				-1.6
1,853,278	-				-0.6
1,853,278	-				-0.4
1,853,278	-				+0.1
1,853,278	-				-0.2
1,853,515	+		Pf1N1B4_1608	0.55	+0.4
1,853,560	+		Pf1N1B4_1608	0.64	-1.1
1,853,561	-		Pf1N1B4_1608	0.65	-2.3
1,853,704	+				+1.0
1,853,704	+				-0.3
1,853,704	+				-1.3
1,853,705	-				-1.1
1,853,705	-				-0.5
1,853,705	-				-1.9
1,853,705	-				+0.2
1,853,705	-				+0.4
1,853,705	-				-0.6
1,853,717	+				+0.1
1,853,717	+				-0.2
1,853,718	-				-0.9
1,853,718	-				-0.0
1,853,718	-				-0.4
1,853,718	-				-0.9
1,853,718	-				-0.9
1,853,718	-				+0.4
1,853,782	+				-0.5
1,853,783	-		Pf1N1B4_1609	0.10	+0.8
1,853,783	-		Pf1N1B4_1609	0.10	-1.4
1,853,786	+		Pf1N1B4_1609	0.10	+0.8
1,853,786	+		Pf1N1B4_1609	0.10	-3.0
1,853,786	+		Pf1N1B4_1609	0.10	-0.0
1,853,787	-		Pf1N1B4_1609	0.11	+0.6
1,853,787	-		Pf1N1B4_1609	0.11	-1.0
1,853,787	-		Pf1N1B4_1609	0.11	-0.6
1,853,787	-		Pf1N1B4_1609	0.11	-1.0
1,853,787	-		Pf1N1B4_1609	0.11	-1.3
1,853,836	+		Pf1N1B4_1609	0.19	+0.3
1,853,983	+				-1.2
1,854,341	-				+0.8
1,854,348	-				+0.4
1,854,348	-				+1.1
1,854,348	-				-0.2
1,854,348	-				+0.8
1,854,348	-				+0.4
1,854,348	-				+1.4
1,854,348	-				-1.0
1,854,348	-				+2.4
1,854,348	-				-0.4
1,854,348	-				+0.8
1,854,348	-				-0.8
1,854,481	+				+0.4
1,854,482	-				+0.8
1,854,531	+				-0.2
1,854,532	-				-0.4
1,854,534	-				-0.3
1,854,534	-				-0.4
1,854,544	+				+1.4
1,854,557	-				+0.8
1,854,557	-				+0.4
1,854,589	-				+1.8
1,854,589	-				+0.0
1,854,589	-				+1.0
1,854,589	-				+0.5
1,854,648	-				-0.6