Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1266

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
1,446,089	-				-1.0
1,446,089	-				-0.3
1,446,116	+				-0.3
1,446,117	-				-0.9
1,446,117	-				-0.3
1,446,117	-				-1.3
1,446,324	+		Pf1N1B4_1265	0.22	-1.2
1,446,324	+		Pf1N1B4_1265	0.22	-1.1
1,446,324	+		Pf1N1B4_1265	0.22	-0.1
1,446,324	+		Pf1N1B4_1265	0.22	-0.4
1,446,325	-		Pf1N1B4_1265	0.22	+0.3
1,446,325	-		Pf1N1B4_1265	0.22	-0.1
1,446,325	-		Pf1N1B4_1265	0.22	-0.0
1,446,325	-		Pf1N1B4_1265	0.22	-0.9
1,446,325	-		Pf1N1B4_1265	0.22	+0.5
1,446,325	-		Pf1N1B4_1265	0.22	+1.3
1,446,325	-		Pf1N1B4_1265	0.22	-0.2
1,446,348	+		Pf1N1B4_1265	0.25	+0.7
1,446,348	+		Pf1N1B4_1265	0.25	+0.1
1,446,348	+		Pf1N1B4_1265	0.25	+0.9
1,446,349	-		Pf1N1B4_1265	0.25	-0.3
1,446,349	-		Pf1N1B4_1265	0.25	-0.2
1,446,388	-		Pf1N1B4_1265	0.29	+0.0
1,446,388	-		Pf1N1B4_1265	0.29	-1.2
1,446,639	+				-0.3
1,446,640	-		Pf1N1B4_1265	0.57	+0.9
1,446,830	-		Pf1N1B4_1265	0.79	-0.9
1,446,871	+		Pf1N1B4_1265	0.83	-0.1
1,446,871	+		Pf1N1B4_1265	0.83	-0.7
1,446,872	-		Pf1N1B4_1265	0.83	-0.2
1,446,872	-		Pf1N1B4_1265	0.83	-0.2
1,446,885	+		Pf1N1B4_1265	0.85	+1.7
1,446,885	+		Pf1N1B4_1265	0.85	-0.5
1,446,885	+		Pf1N1B4_1265	0.85	-0.9
1,446,885	+		Pf1N1B4_1265	0.85	+0.3
1,446,886	-		Pf1N1B4_1265	0.85	-0.7
1,446,886	-		Pf1N1B4_1265	0.85	-1.2
1,446,927	+		Pf1N1B4_1265	0.89	+0.4
1,446,927	+		Pf1N1B4_1265	0.89	+0.3
1,446,927	+		Pf1N1B4_1265	0.89	+0.8
1,446,927	+		Pf1N1B4_1265	0.89	+1.5
1,446,927	+		Pf1N1B4_1265	0.89	+1.0
1,446,928	-		Pf1N1B4_1265	0.89	+0.3
1,446,928	-		Pf1N1B4_1265	0.89	+0.4
1,446,928	-		Pf1N1B4_1265	0.89	-0.3
1,446,928	-		Pf1N1B4_1265	0.89	-0.3
1,446,928	-		Pf1N1B4_1265	0.89	+0.8
1,446,943	+				-0.6
1,446,944	-				-0.8
1,447,029	+				-0.7
1,447,029	+				+0.7
1,447,029	+				+1.3
1,447,029	+				+0.7
1,447,029	+				+0.7
1,447,030	-				-0.3
1,447,030	-				-0.2
1,447,043	+				+0.4
1,447,043	+				+0.0
1,447,044	-				-0.3
1,447,047	-				+1.0
1,447,073	+		Pf1N1B4_1266	0.26	-0.2
1,447,111	+		Pf1N1B4_1266	0.49	-0.9
1,447,112	-				-1.1
1,447,112	-		Pf1N1B4_1266	0.50	-2.0
1,447,190	+				-0.7
1,447,190	+				-1.2
1,447,191	-				+1.5
1,447,191	-				-2.3
1,447,191	-				-0.4
1,447,223	+				+0.3
1,447,223	+				+1.0
1,447,224	-				-0.5
1,447,224	-				-1.1
1,447,254	+				-0.7
1,447,254	+				-0.8
1,447,254	+				+0.9
1,447,254	+				-1.3
1,447,254	+				-1.9
1,447,254	+				-0.2
1,447,254	+				+0.3
1,447,254	+				-0.2
1,447,254	+				+1.5
1,447,254	+				+1.3
1,447,254	+				+1.0
1,447,254	+				+1.3
1,447,254	+				-1.3
1,447,255	-				+0.3
1,447,255	-				-0.7
1,447,255	-				+0.3
1,447,255	-				-1.5
1,447,255	-				+0.3
1,447,322	+				-0.2
1,447,390	+				-0.2
1,447,390	+				-1.5
1,447,390	+				+0.7
1,447,394	+				+0.3
1,447,394	+				-0.3
1,447,394	+				-0.3
1,447,394	+				+0.3
1,447,444	+				-1.3
1,447,444	+				+0.7
1,447,444	+				-0.4
1,447,662	+				-0.3
1,447,663	-		Pf1N1B4_1267	0.10	-1.3
1,447,713	+		Pf1N1B4_1267	0.13	-0.3
1,447,713	+		Pf1N1B4_1267	0.13	-0.3
1,447,713	+		Pf1N1B4_1267	0.13	-0.1
1,447,714	-		Pf1N1B4_1267	0.13	-1.3
1,447,714	-				-0.7
1,447,714	-		Pf1N1B4_1267	0.13	-1.0
1,447,736	+		Pf1N1B4_1267	0.14	-1.0
1,447,813	-		Pf1N1B4_1267	0.18	+0.0
1,447,842	+		Pf1N1B4_1267	0.19	-0.1
1,447,878	+		Pf1N1B4_1267	0.21	-0.7
1,447,878	+		Pf1N1B4_1267	0.21	-0.2
1,447,903	-		Pf1N1B4_1267	0.22	-1.4
1,447,950	+		Pf1N1B4_1267	0.25	+0.8
1,447,950	+		Pf1N1B4_1267	0.25	+0.3
1,447,951	-		Pf1N1B4_1267	0.25	+0.8
1,447,951	-		Pf1N1B4_1267	0.25	-0.2
1,447,953	+		Pf1N1B4_1267	0.25	+1.8
1,447,977	+		Pf1N1B4_1267	0.26	-0.1
1,447,977	+		Pf1N1B4_1267	0.26	-0.2
1,447,977	+		Pf1N1B4_1267	0.26	+0.9
1,447,978	-		Pf1N1B4_1267	0.26	-0.9
1,448,131	+		Pf1N1B4_1267	0.34	-1.5