Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1264

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
1,443,785	-		Pf1N1B4_1262	0.79	-0.9
1,444,108	-				+1.1
1,444,146	+				-0.3
1,444,146	+				+0.3
1,444,146	+				-2.3
1,444,147	-				+0.8
1,444,147	-				+0.3
1,444,147	-				-0.7
1,444,249	+				-1.3
1,444,349	+		Pf1N1B4_1263	0.14	-0.7
1,444,349	+		Pf1N1B4_1263	0.14	+0.1
1,444,406	+		Pf1N1B4_1263	0.28	+0.3
1,444,426	+		Pf1N1B4_1263	0.32	-0.7
1,444,427	-		Pf1N1B4_1263	0.33	-0.3
1,444,618	-		Pf1N1B4_1263	0.79	+0.7
1,444,789	+		Pf1N1B4_1264	0.11	+0.3
1,444,790	-		Pf1N1B4_1264	0.11	-1.5
1,444,964	-		Pf1N1B4_1264	0.25	+0.4
1,445,055	-		Pf1N1B4_1264	0.33	-0.3
1,445,360	-		Pf1N1B4_1264	0.58	-1.5
1,445,360	-		Pf1N1B4_1264	0.58	-0.7
1,445,360	-		Pf1N1B4_1264	0.58	-2.3
1,445,360	-		Pf1N1B4_1264	0.58	-0.7
1,445,360	-		Pf1N1B4_1264	0.58	-0.9
1,445,512	-		Pf1N1B4_1264	0.70	-0.5
1,445,683	+		Pf1N1B4_1264	0.84	-0.9
1,445,724	+		Pf1N1B4_1264	0.88	-0.2
1,445,776	+				+0.5
1,445,776	+				-0.1
1,445,777	-				-0.1
1,445,777	-				+0.8
1,445,777	-				-0.7
1,445,777	-				-1.6
1,445,782	+				-1.5
1,445,782	+				-1.9
1,445,782	+				-0.5
1,445,782	+				-1.7
1,445,782	+				+0.3
1,445,782	+				-0.3
1,445,782	+				+2.3
1,445,782	+				+0.4
1,445,783	-				-0.7
1,445,783	-				+0.7
1,445,783	-				+0.1
1,445,783	-				-0.6
1,445,914	+				+0.0
1,445,914	+				-0.2
1,445,943	+				+0.9
1,445,943	+				-1.3
1,445,943	+				-1.1
1,445,943	+				+0.7
1,445,943	+				+2.3
1,445,944	-				+2.4
1,445,957	-				-1.1
1,445,957	-				+0.5
1,445,957	-				-0.4
1,446,089	-				-1.0
1,446,089	-				-0.3
1,446,116	+				-0.3
1,446,117	-				-0.9
1,446,117	-				-0.3
1,446,117	-				-1.3
1,446,324	+		Pf1N1B4_1265	0.22	-1.2
1,446,324	+		Pf1N1B4_1265	0.22	-1.1
1,446,324	+		Pf1N1B4_1265	0.22	-0.1
1,446,324	+		Pf1N1B4_1265	0.22	-0.4
1,446,325	-		Pf1N1B4_1265	0.22	+0.3
1,446,325	-		Pf1N1B4_1265	0.22	-0.1
1,446,325	-		Pf1N1B4_1265	0.22	-0.0
1,446,325	-		Pf1N1B4_1265	0.22	-0.9
1,446,325	-		Pf1N1B4_1265	0.22	+0.5
1,446,325	-		Pf1N1B4_1265	0.22	+1.3
1,446,325	-		Pf1N1B4_1265	0.22	-0.2
1,446,348	+		Pf1N1B4_1265	0.25	+0.7
1,446,348	+		Pf1N1B4_1265	0.25	+0.1
1,446,348	+		Pf1N1B4_1265	0.25	+0.9
1,446,349	-		Pf1N1B4_1265	0.25	-0.3
1,446,349	-		Pf1N1B4_1265	0.25	-0.2
1,446,388	-		Pf1N1B4_1265	0.29	+0.0
1,446,388	-		Pf1N1B4_1265	0.29	-1.2
1,446,639	+				-0.3
1,446,640	-		Pf1N1B4_1265	0.57	+0.9
1,446,830	-		Pf1N1B4_1265	0.79	-0.9
1,446,871	+		Pf1N1B4_1265	0.83	-0.1
1,446,871	+		Pf1N1B4_1265	0.83	-0.7
1,446,872	-		Pf1N1B4_1265	0.83	-0.2
1,446,872	-		Pf1N1B4_1265	0.83	-0.2