Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1181

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
1,332,373	+		Pf1N1B4_1180	0.71	-0.2
1,332,373	+		Pf1N1B4_1180	0.71	-0.3
1,332,524	+				+1.1
1,332,525	-				-0.3
1,332,525	-				+1.7
1,332,540	-				+2.0
1,332,792	+		Pf1N1B4_1181	0.65	-1.6
1,332,847	-		Pf1N1B4_1181	0.82	+0.9
1,332,868	+				+2.8
1,332,868	+		Pf1N1B4_1181	0.89	+0.2
1,332,868	+		Pf1N1B4_1181	0.89	+1.5
1,332,869	-		Pf1N1B4_1181	0.89	+0.4
1,332,869	-		Pf1N1B4_1181	0.89	+1.2
1,332,869	-		Pf1N1B4_1181	0.89	+2.2
1,332,869	-		Pf1N1B4_1181	0.89	+1.8
1,332,869	-		Pf1N1B4_1181	0.89	-0.8
1,333,339	-				+0.2
1,333,339	-				-2.2
1,333,339	-				-0.2
1,333,339	-				-0.9
1,333,339	-				+1.2
1,333,390	-				-1.3
1,333,582	-		Pf1N1B4_1183	0.19	-1.9
1,333,582	-		Pf1N1B4_1183	0.19	-0.7
1,333,633	+		Pf1N1B4_1183	0.23	+2.2
1,333,633	+		Pf1N1B4_1183	0.23	+0.8
1,333,634	-		Pf1N1B4_1183	0.23	-0.8
1,333,693	+		Pf1N1B4_1183	0.28	-0.8
1,333,731	+		Pf1N1B4_1183	0.30	-0.1
1,333,731	+		Pf1N1B4_1183	0.30	+0.1
1,333,731	+		Pf1N1B4_1183	0.30	-0.2
1,333,802	+		Pf1N1B4_1183	0.36	-0.6
1,333,802	+		Pf1N1B4_1183	0.36	+0.8
1,333,802	+		Pf1N1B4_1183	0.36	+1.2
1,333,802	+		Pf1N1B4_1183	0.36	-2.3
1,333,803	-		Pf1N1B4_1183	0.36	-0.3
1,333,803	-		Pf1N1B4_1183	0.36	-0.1
1,333,803	-		Pf1N1B4_1183	0.36	+0.2
1,333,803	-		Pf1N1B4_1183	0.36	-0.2
1,333,803	-		Pf1N1B4_1183	0.36	+0.1
1,333,803	-		Pf1N1B4_1183	0.36	+0.5
1,333,826	+		Pf1N1B4_1183	0.38	+0.2
1,333,826	+		Pf1N1B4_1183	0.38	+2.8
1,333,826	+		Pf1N1B4_1183	0.38	+0.5
1,333,827	-		Pf1N1B4_1183	0.38	+0.2
1,333,827	-		Pf1N1B4_1183	0.38	-2.1
1,333,827	-		Pf1N1B4_1183	0.38	-0.9
1,333,827	-		Pf1N1B4_1183	0.38	-0.3
1,333,827	-		Pf1N1B4_1183	0.38	+1.0
1,333,827	-		Pf1N1B4_1183	0.38	+0.6