Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1155

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
1,301,417	+		Pf1N1B4_1153	0.65	-0.1
1,301,615	+		Pf1N1B4_1153	0.88	-1.2
1,301,615	+		Pf1N1B4_1153	0.88	-1.1
1,301,616	-		Pf1N1B4_1153	0.88	+0.4
1,301,649	+				-1.6
1,301,649	+				-2.1
1,301,649	+				+0.5
1,301,651	+				+0.2
1,301,651	+				+1.8
1,301,652	-				+1.2
1,301,725	+				-1.2
1,301,725	+				-0.5
1,301,725	+				-1.7
1,301,732	+				+0.8
1,301,732	+				-0.2
1,301,737	+				-1.1
1,301,737	+				-0.8
1,301,737	+				-0.1
1,301,737	+				+1.0
1,301,738	-				+0.1
1,301,744	+				-0.3
1,301,744	+				-1.3
1,301,745	-				-0.2
1,301,767	+				+2.2
1,301,768	-				+1.2
1,301,811	-				+0.8
1,301,811	-				-0.8
1,301,811	-				+0.7
1,301,815	+				+0.2
1,301,816	-				-0.6
1,301,816	-				-0.5
1,301,816	-				+0.2
1,301,816	-				+0.6
1,301,829	+				+0.2
1,301,830	-				-0.1
1,301,852	+		Pf1N1B4_1154	0.17	+1.1
1,301,852	+		Pf1N1B4_1154	0.17	-0.1
1,301,853	-		Pf1N1B4_1154	0.17	-0.9
1,301,853	-		Pf1N1B4_1154	0.17	+0.0
1,301,853	-		Pf1N1B4_1154	0.17	-0.3
1,301,917	-		Pf1N1B4_1154	0.38	-1.8
1,301,917	-		Pf1N1B4_1154	0.38	-1.3
1,301,917	-		Pf1N1B4_1154	0.38	+1.0
1,301,917	-		Pf1N1B4_1154	0.38	-0.8
1,301,917	-		Pf1N1B4_1154	0.38	-0.9
1,302,052	-		Pf1N1B4_1154	0.82	-0.3
1,302,052	-		Pf1N1B4_1154	0.82	+0.4
1,302,052	-				+0.5
1,302,172	+				+0.1
1,302,172	+				-0.3
1,302,173	-				+0.5
1,302,173	-				+0.8
1,302,259	+				-0.6
1,302,260	-				-1.1
1,302,261	+				+0.2
1,302,261	+				-0.2
1,302,261	+				+0.7
1,302,261	+				+0.0
1,302,262	-				+0.7
1,302,262	-				+0.2
1,302,262	-				-0.8
1,302,262	-				-0.6
1,302,262	-				-0.6
1,302,262	-				-0.3
1,302,283	-				-0.3
1,302,283	-				+1.8
1,302,283	-				+0.8
1,302,294	+				-0.6
1,302,295	-				+0.2
1,302,295	-				+0.2
1,302,295	-				-0.2
1,302,295	-				-0.1
1,302,300	+				+0.8
1,302,300	+				-0.8
1,302,301	-				-0.1
1,302,301	-				+0.5
1,302,301	-				+0.2
1,302,308	-				-0.2
1,302,323	+				-0.5
1,302,323	+				-1.6
1,302,323	+				-0.3
1,302,323	+				+2.0
1,302,324	-				+1.7
1,302,324	-				+1.5
1,302,324	-				-0.0
1,302,348	+				-0.3
1,302,348	+				+1.7
1,302,348	+				+0.8
1,302,348	+				-1.3
1,302,348	+				-1.3
1,302,349	-				-0.8
1,302,349	-				+0.7
1,302,349	-				+1.0
1,302,349	-				-1.0
1,302,528	+		Pf1N1B4_1155	0.22	-0.3
1,302,817	+		Pf1N1B4_1155	0.75	-0.2
1,302,817	+		Pf1N1B4_1155	0.75	-0.3
1,302,818	-		Pf1N1B4_1155	0.75	-0.3
1,302,818	-		Pf1N1B4_1155	0.75	-2.3
1,302,818	-		Pf1N1B4_1155	0.75	-1.5
1,302,818	-				-0.3
1,302,818	-		Pf1N1B4_1155	0.75	-0.6
1,302,827	+		Pf1N1B4_1155	0.77	-0.0
1,302,827	+		Pf1N1B4_1155	0.77	-1.3
1,302,828	-		Pf1N1B4_1155	0.77	+0.5
1,302,951	+				-0.8
1,302,952	-				+0.1
1,303,029	+		Pf1N1B4_5175	0.88	-1.3
1,303,045	+				-0.3
1,303,052	-				+1.7
1,303,052	-				+0.4
1,303,121	-				+0.2
1,303,129	-				+0.8
1,303,148	-				+1.2
1,303,200	+				+0.1
1,303,201	-				-1.3
1,303,215	+				-0.6
1,303,215	+				-1.4
1,303,215	+				-0.0