Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1103

Experiment: 1-ethyl-3-methylimidazolium lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 5 mM
1,236,764	-				+1.2
1,236,770	+				+0.2
1,236,770	+				+1.3
1,236,770	+				-1.6
1,236,771	-				-1.3
1,236,771	-				+0.7
1,236,771	-				-0.6
1,236,869	-		Pf1N1B4_1103	0.26	+0.7
1,236,869	-		Pf1N1B4_1103	0.26	-2.6
1,236,869	-		Pf1N1B4_1103	0.26	-1.1
1,236,869	-		Pf1N1B4_1103	0.26	+0.2
1,236,876	+		Pf1N1B4_1103	0.28	-1.3
1,236,877	-		Pf1N1B4_1103	0.28	-2.1
1,236,877	-		Pf1N1B4_1103	0.28	-1.5
1,236,877	-		Pf1N1B4_1103	0.28	+1.2
1,236,880	-		Pf1N1B4_1103	0.29	-1.6
1,236,986	+		Pf1N1B4_1103	0.57	+0.4
1,237,042	-		Pf1N1B4_1103	0.72	-1.7
1,237,042	-		Pf1N1B4_1103	0.72	-0.0
1,237,147	-				+1.5
1,237,162	+				-1.3
1,237,162	+				+0.5
1,237,182	+				-1.8
1,237,182	+				-0.6
1,237,182	+				-1.6
1,237,224	+				+2.8
1,237,225	-				+0.0
1,237,574	-		Pf1N1B4_1104	0.36	+1.9
1,237,574	-		Pf1N1B4_1104	0.36	-1.8
1,237,598	+		Pf1N1B4_1104	0.38	+0.3
1,237,599	-		Pf1N1B4_1104	0.38	-1.3
1,237,599	-		Pf1N1B4_1104	0.38	-0.4
1,237,612	-		Pf1N1B4_1104	0.39	+0.2
1,237,893	+		Pf1N1B4_1104	0.66	-2.1
1,237,893	+		Pf1N1B4_1104	0.66	+0.9
1,237,893	+		Pf1N1B4_1104	0.66	-0.3
1,237,893	+		Pf1N1B4_1104	0.66	+0.8
1,237,894	-		Pf1N1B4_1104	0.66	+1.0
1,237,930	-		Pf1N1B4_1104	0.69	-2.0
1,237,930	-		Pf1N1B4_1104	0.69	+0.2
1,238,040	-		Pf1N1B4_1104	0.79	-0.4
1,238,040	-		Pf1N1B4_1104	0.79	+0.8
1,238,090	+		Pf1N1B4_1104	0.84	+0.1
1,238,090	+		Pf1N1B4_1104	0.84	-0.3
1,238,099	+		Pf1N1B4_1104	0.85	+0.4
1,238,100	-				+1.2
1,238,100	-		Pf1N1B4_1104	0.85	-0.1