Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03516

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
3,671,739	-		CCNA_03513	0.88	+3.4
3,671,743	+		CCNA_03513	0.88	-2.6
3,671,858	+				-0.1
3,671,866	-				+4.1
3,671,866	-				+3.4
3,671,867	-				+4.3
3,671,902	-				+2.3
3,671,908	+				-1.5
3,671,915	+				+1.4
3,671,915	+				+0.2
3,671,923	+				+1.1
3,671,923	+				+1.6
3,671,924	-				+2.8
3,671,924	-				+4.2
3,671,933	-				+3.2
3,671,963	+				+0.3
3,672,060	-		CCNA_03514	0.22	+2.2
3,672,087	+		CCNA_03514	0.26	+1.6
3,672,121	-		CCNA_03514	0.31	+2.1
3,672,130	-		CCNA_03514	0.33	+1.8
3,672,177	-		CCNA_03514	0.40	+1.6
3,672,190	+		CCNA_03514	0.42	+0.2
3,672,190	+		CCNA_03514	0.42	+1.1
3,672,192	+		CCNA_03514	0.42	+0.1
3,672,198	-		CCNA_03514	0.43	+1.5
3,672,198	-		CCNA_03514	0.43	+0.7
3,672,198	-		CCNA_03514	0.43	+1.3
3,672,198	-		CCNA_03514	0.43	+1.3
3,672,198	-		CCNA_03514	0.43	+2.0
3,672,198	-		CCNA_03514	0.43	+1.4
3,672,198	-		CCNA_03514	0.43	+1.4
3,672,198	-		CCNA_03514	0.43	+1.9
3,672,198	-		CCNA_03514	0.43	+1.8
3,672,239	+		CCNA_03514	0.50	-1.4
3,672,239	+		CCNA_03514	0.50	+0.3
3,672,247	-		CCNA_03514	0.51	+2.7
3,672,249	+		CCNA_03514	0.51	+1.1
3,672,257	-		CCNA_03514	0.52	+2.1
3,672,257	-		CCNA_03514	0.52	+3.0
3,672,304	+		CCNA_03514	0.60	+0.9
3,672,362	-		CCNA_03514	0.69	+1.7
3,672,366	+		CCNA_03514	0.69	+1.1
3,672,374	-		CCNA_03514	0.70	+2.0
3,672,374	-		CCNA_03514	0.70	+2.1
3,672,388	-		CCNA_03514	0.73	+1.7
3,672,413	-		CCNA_03514	0.76	+1.9
3,672,440	-		CCNA_03514	0.80	+2.4
3,672,444	+		CCNA_03514	0.81	-0.8
3,672,583	-		CCNA_03515	0.24	+3.1
3,672,621	+		CCNA_03515	0.48	+0.3
3,672,629	-		CCNA_03515	0.52	+1.6
3,672,629	-		CCNA_03515	0.52	+1.2
3,672,703	-				+3.1
3,672,747	-				+3.6
3,672,816	-		CCNA_03516	0.11	+3.4
3,672,849	-		CCNA_03516	0.14	+1.9
3,672,977	-		CCNA_03516	0.27	+0.3
3,673,018	-		CCNA_03516	0.31	-1.0
3,673,126	-		CCNA_03516	0.42	+0.6
3,673,128	-		CCNA_03516	0.42	-0.4
3,673,190	-		CCNA_03516	0.48	+0.3
3,673,491	-		CCNA_03516	0.77	-0.9
3,673,514	+		CCNA_03516	0.80	+1.1
3,673,719	-				+3.6
3,673,744	+				-0.5
3,673,747	-				+3.1
3,673,757	-				+3.2
3,673,762	+				+0.2
3,673,777	-				+3.5
3,673,827	+				+2.5
3,673,835	-				+3.5
3,673,835	-				+3.7
3,673,871	-				+3.6
3,673,907	-				+2.9
3,673,940	-				+3.2
3,673,973	-				+1.7
3,673,973	-				+0.8
3,673,988	-				+1.4
3,674,044	+		CCNA_03517	0.13	+0.2
3,674,044	-		CCNA_03517	0.13	-1.3
3,674,052	-		CCNA_03517	0.13	+0.6
3,674,150	-		CCNA_03517	0.19	+0.0
3,674,157	+		CCNA_03517	0.20	+0.2
3,674,165	-		CCNA_03517	0.20	+1.3
3,674,261	-		CCNA_03517	0.26	-0.1
3,674,261	-		CCNA_03517	0.26	+0.4
3,674,282	-		CCNA_03517	0.27	+0.9
3,674,288	-		CCNA_03517	0.28	+1.0
3,674,300	-		CCNA_03517	0.28	+0.8
3,674,380	-		CCNA_03517	0.33	-0.0
3,674,391	-		CCNA_03517	0.34	+0.1
3,674,391	-		CCNA_03517	0.34	+0.6
3,674,459	-		CCNA_03517	0.38	+0.9
3,674,516	-		CCNA_03517	0.41	+0.9
3,674,521	-		CCNA_03517	0.42	-1.1
3,674,521	-		CCNA_03517	0.42	-0.2
3,674,570	-		CCNA_03517	0.45	+0.9
3,674,676	+		CCNA_03517	0.51	-0.9