Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03455

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
3,617,489	-				-1.5
3,617,555	-				-0.2
3,617,555	-				+0.5
3,617,593	-				+1.0
3,617,602	+				+1.2
3,617,669	+				+0.8
3,617,669	+				-1.4
3,617,677	-				-0.9
3,617,677	-				-0.1
3,617,682	+				-0.5
3,617,690	-				-0.5
3,617,718	-		CCNA_03454	0.10	-0.4
3,617,755	+		CCNA_03454	0.14	-3.4
3,617,755	+		CCNA_03454	0.14	-1.4
3,617,755	+		CCNA_03454	0.14	-0.7
3,617,763	-		CCNA_03454	0.15	+0.1
3,617,763	-		CCNA_03454	0.15	+0.4
3,617,792	-		CCNA_03454	0.19	-0.2
3,617,801	+		CCNA_03454	0.20	+0.5
3,617,809	-		CCNA_03454	0.21	+1.2
3,617,813	+		CCNA_03454	0.21	+0.7
3,617,821	-		CCNA_03454	0.22	-0.5
3,617,827	-		CCNA_03454	0.23	-0.2
3,617,834	+		CCNA_03454	0.24	-0.3
3,617,834	+		CCNA_03454	0.24	+0.2
3,617,834	+				+3.4
3,617,842	-		CCNA_03454	0.25	-0.9
3,617,843	+		CCNA_03454	0.25	-1.2
3,617,843	+		CCNA_03454	0.25	+0.3
3,617,914	+		CCNA_03454	0.33	-0.2
3,617,937	+		CCNA_03454	0.36	+2.1
3,617,945	-		CCNA_03454	0.37	-0.7
3,617,983	+		CCNA_03454	0.41	-0.6
3,617,991	-		CCNA_03454	0.42	-1.0
3,618,031	+		CCNA_03454	0.47	+2.0
3,618,031	-		CCNA_03454	0.47	-1.0
3,618,064	+		CCNA_03454	0.51	+0.1
3,618,119	+		CCNA_03454	0.57	+1.5
3,618,147	+		CCNA_03454	0.61	+0.5
3,618,147	+		CCNA_03454	0.61	+1.0
3,618,155	-		CCNA_03454	0.62	+2.6
3,618,256	+		CCNA_03454	0.74	+3.3
3,618,355	+		CCNA_03454	0.85	+2.6
3,618,355	+		CCNA_03454	0.85	+2.7
3,618,428	+				+1.7
3,618,428	+				+1.4
3,618,453	-				+0.5
3,618,453	-				+1.0
3,618,479	+				+3.0
3,619,650	+				+2.3
3,619,654	+				+0.6
3,619,700	+				+2.1
3,619,726	+				+2.2
3,619,735	+		CCNA_03456	0.11	+0.2
3,619,735	+		CCNA_03456	0.11	+0.3
3,619,743	-		CCNA_03456	0.12	-0.5
3,619,743	-		CCNA_03456	0.12	-0.2
3,619,774	+		CCNA_03456	0.15	-1.1
3,619,792	-		CCNA_03456	0.17	-0.9
3,619,792	-		CCNA_03456	0.17	-0.3
3,619,870	-		CCNA_03456	0.27	+0.7
3,619,870	-		CCNA_03456	0.27	-0.6
3,619,870	-		CCNA_03456	0.27	+0.8
3,619,896	+		CCNA_03456	0.30	-1.2
3,619,921	-		CCNA_03456	0.33	+0.3
3,619,930	-		CCNA_03456	0.34	-1.7
3,619,930	-		CCNA_03456	0.34	+0.8
3,619,930	-		CCNA_03456	0.34	-0.1
3,619,930	-		CCNA_03456	0.34	-0.3
3,619,976	+		CCNA_03456	0.39	+2.4
3,620,001	-		CCNA_03456	0.42	+1.1
3,620,089	-		CCNA_03456	0.53	-0.9
3,620,091	+		CCNA_03456	0.53	-0.6
3,620,109	+		CCNA_03456	0.55	+0.8
3,620,109	+				+2.0
3,620,117	-		CCNA_03456	0.56	-1.2
3,620,138	+		CCNA_03456	0.59	+0.7
3,620,138	+		CCNA_03456	0.59	-1.5
3,620,138	+		CCNA_03456	0.59	+1.4
3,620,146	-		CCNA_03456	0.60	+0.1
3,620,163	+		CCNA_03456	0.62	+1.1
3,620,176	+		CCNA_03456	0.63	+0.0
3,620,193	+		CCNA_03456	0.65	-2.0
3,620,226	+		CCNA_03456	0.69	+0.4
3,620,257	-		CCNA_03456	0.73	+0.8
3,620,268	+		CCNA_03456	0.74	+1.3
3,620,268	-		CCNA_03456	0.74	-1.1
3,620,289	-		CCNA_03456	0.77	-0.0
3,620,304	-		CCNA_03456	0.79	-0.2
3,620,327	-		CCNA_03456	0.81	-0.8
3,620,354	-		CCNA_03456	0.85	-0.6
3,620,354	-		CCNA_03456	0.85	-1.0
3,620,387	+		CCNA_03456	0.89	-0.7
3,620,434	+				-0.1
3,620,441	+				+1.9
3,620,474	-				+0.6
3,620,528	+				+0.7
3,620,543	-				-0.4