Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03207

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
3,368,756	+		CCNA_03206	0.36	+0.1
3,368,793	+		CCNA_03206	0.38	+1.6
3,368,816	+		CCNA_03206	0.40	+0.9
3,368,838	-		CCNA_03206	0.42	-1.9
3,368,842	+		CCNA_03206	0.42	+0.4
3,368,878	+		CCNA_03206	0.44	+1.0
3,368,923	+		CCNA_03206	0.48	+0.4
3,368,923	+		CCNA_03206	0.48	+0.6
3,368,928	+		CCNA_03206	0.48	+1.9
3,368,931	-		CCNA_03206	0.48	+3.3
3,368,978	+		CCNA_03206	0.52	+0.8
3,368,986	-		CCNA_03206	0.52	-1.0
3,369,002	+		CCNA_03206	0.53	-0.5
3,369,019	-		CCNA_03206	0.55	+0.9
3,369,053	+		CCNA_03206	0.57	+1.0
3,369,078	-		CCNA_03206	0.59	-1.5
3,369,078	-		CCNA_03206	0.59	-2.4
3,369,078	-		CCNA_03206	0.59	-0.7
3,369,125	+		CCNA_03206	0.62	+0.5
3,369,156	+		CCNA_03206	0.64	+0.0
3,369,186	+		CCNA_03206	0.67	+1.2
3,369,205	+		CCNA_03206	0.68	+0.2
3,369,233	-		CCNA_03206	0.70	+0.2
3,369,255	-		CCNA_03206	0.72	-1.0
3,369,268	-		CCNA_03206	0.72	+0.3
3,369,307	+		CCNA_03206	0.75	-0.1
3,369,358	+		CCNA_03206	0.79	+0.4
3,369,402	-		CCNA_03206	0.82	+0.8
3,369,411	+		CCNA_03206	0.83	-0.5
3,369,421	+		CCNA_03206	0.84	+1.4
3,369,450	-		CCNA_03206	0.86	-0.5
3,369,515	+				-0.0
3,369,543	-				+1.2
3,369,613	+				+1.5
3,369,633	+				+1.2
3,369,636	+				+2.4
3,369,651	-				-0.2
3,369,684	+				+0.9
3,369,688	-				+0.4
3,369,748	-				-0.1
3,369,751	+				-0.8
3,369,751	+				+0.8
3,369,751	+				+1.8
3,369,759	-				+0.3
3,369,761	+				-1.2
3,369,872	-		CCNA_03207	0.14	+2.0
3,369,886	+		CCNA_03207	0.16	+0.2
3,369,933	+		CCNA_03207	0.22	-0.8
3,370,036	-		CCNA_03207	0.34	+1.9
3,370,040	+		CCNA_03207	0.35	-0.9
3,370,062	-		CCNA_03207	0.37	+0.4
3,370,068	+		CCNA_03207	0.38	+0.1
3,370,119	+		CCNA_03207	0.44	-0.1
3,370,119	+		CCNA_03207	0.44	+0.7
3,370,134	+		CCNA_03207	0.46	-1.0
3,370,134	+		CCNA_03207	0.46	+0.2
3,370,134	+		CCNA_03207	0.46	+0.1
3,370,134	+		CCNA_03207	0.46	+0.7
3,370,142	-		CCNA_03207	0.47	-1.1
3,370,236	+		CCNA_03207	0.58	+1.4
3,370,236	+		CCNA_03207	0.58	+0.5
3,370,236	+		CCNA_03207	0.58	+2.2
3,370,293	+		CCNA_03207	0.65	+0.3
3,370,299	-		CCNA_03207	0.66	+0.2
3,370,299	-		CCNA_03207	0.66	-1.4
3,370,300	+		CCNA_03207	0.66	+1.0
3,370,301	-		CCNA_03207	0.66	-0.9
3,370,307	+		CCNA_03207	0.67	+0.3
3,370,307	+		CCNA_03207	0.67	+1.8
3,370,308	-		CCNA_03207	0.67	+1.6
3,370,308	-		CCNA_03207	0.67	-1.1
3,370,310	+		CCNA_03207	0.67	+1.7
3,370,315	-		CCNA_03207	0.68	+0.5
3,370,327	+		CCNA_03207	0.69	+0.6
3,370,327	+		CCNA_03207	0.69	+0.8
3,370,327	+		CCNA_03207	0.69	+0.5
3,370,335	-		CCNA_03207	0.70	-0.9
3,370,352	+		CCNA_03207	0.72	+0.9
3,370,393	-		CCNA_03207	0.77	-0.8
3,370,416	-		CCNA_03207	0.80	-1.5
3,370,440	+		CCNA_03207	0.83	+1.9
3,370,523	+				+1.6
3,370,529	-				-0.1
3,370,575	-				-1.6
3,370,588	+				+1.2
3,370,588	+				+0.1
3,370,588	-				-1.0
3,370,594	+				+0.7
3,370,600	+				+0.1
3,370,600	+				+2.5
3,370,600	+				+1.2
3,370,600	+				+1.9
3,370,600	+				+1.8
3,370,600	+				-0.3
3,370,600	+				+1.4
3,370,600	+				+0.1
3,370,600	+				+1.3
3,370,600	+				+1.1
3,370,600	+				-0.8
3,370,600	+				+0.5
3,370,600	+				+0.5
3,370,608	-				-0.5
3,370,608	-				+2.0
3,370,608	-				-0.6
3,370,608	-				-0.1
3,370,608	-				-0.4
3,370,613	-				+2.0
3,370,615	-				-0.1
3,370,633	+				-0.1
3,370,644	+				+0.2
3,370,644	+				-0.2
3,370,644	+				-0.2
3,370,644	+				+0.2
3,370,652	-				-0.7
3,370,652	-				+0.8
3,370,654	+				+0.5
3,370,660	+				-0.3
3,370,661	+				-0.1
3,370,668	-				-0.4
3,370,675	-				+0.2
3,370,701	+				-1.4
3,370,701	+				-0.4
3,370,709	-				-0.0
3,370,858	-		CCNA_03208	0.14	+1.2
3,370,908	+		CCNA_03208	0.20	-0.6
3,370,908	+		CCNA_03208	0.20	+0.2
3,370,953	+		CCNA_03208	0.25	+0.5
3,370,978	+		CCNA_03208	0.27	+0.5
3,370,978	+		CCNA_03208	0.27	+0.6
3,371,065	+		CCNA_03208	0.37	+0.6
3,371,065	+		CCNA_03208	0.37	-0.6
3,371,065	+		CCNA_03208	0.37	+0.2
3,371,065	+		CCNA_03208	0.37	+1.3
3,371,073	-		CCNA_03208	0.38	+1.8
3,371,073	-		CCNA_03208	0.38	-0.9
3,371,073	-				+2.8
3,371,117	-		CCNA_03208	0.42	-0.7
3,371,154	-		CCNA_03208	0.46	-0.7
3,371,154	-		CCNA_03208	0.46	-0.4
3,371,224	+		CCNA_03208	0.54	-1.1
3,371,245	-		CCNA_03208	0.56	+1.0
3,371,267	-		CCNA_03208	0.58	-0.1
3,371,293	-		CCNA_03208	0.61	-0.7
3,371,309	+		CCNA_03208	0.63	-0.6
3,371,309	+		CCNA_03208	0.63	+0.1
3,371,309	+		CCNA_03208	0.63	+0.5
3,371,311	+		CCNA_03208	0.63	-0.2
3,371,317	-		CCNA_03208	0.64	+0.8
3,371,317	-		CCNA_03208	0.64	+0.4
3,371,317	-		CCNA_03208	0.64	+0.8
3,371,317	-		CCNA_03208	0.64	-0.4
3,371,317	-		CCNA_03208	0.64	+0.0
3,371,317	-		CCNA_03208	0.64	+0.8
3,371,325	+		CCNA_03208	0.65	+0.2
3,371,329	-		CCNA_03208	0.65	-2.0
3,371,338	-		CCNA_03208	0.66	-0.3
3,371,351	+		CCNA_03208	0.67	-0.5
3,371,363	-		CCNA_03208	0.69	-0.4
3,371,388	-		CCNA_03208	0.71	-0.2
3,371,419	-		CCNA_03208	0.75	-0.1
3,371,527	-		CCNA_03208	0.86	-0.3
3,371,560	+		CCNA_03208	0.90	+0.1
3,371,560	+		CCNA_03208	0.90	+0.8
3,371,560	+		CCNA_03208	0.90	+0.8
3,371,561	-		CCNA_03208	0.90	+0.4
3,371,561	-		CCNA_03208	0.90	+1.2
3,371,567	+				-1.5