Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03202

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
3,362,155	-		CCNA_03201	0.33	-0.8
3,362,189	-		CCNA_03201	0.36	+1.5
3,362,215	+		CCNA_03201	0.38	+0.6
3,362,224	-		CCNA_03201	0.38	+0.1
3,362,224	-		CCNA_03201	0.38	-0.2
3,362,224	-		CCNA_03201	0.38	+0.1
3,362,228	+		CCNA_03201	0.39	+1.0
3,362,229	-		CCNA_03201	0.39	+1.5
3,362,238	+		CCNA_03201	0.39	+0.4
3,362,284	-		CCNA_03201	0.43	+0.8
3,362,327	-		CCNA_03201	0.46	+0.4
3,362,344	-		CCNA_03201	0.48	+1.8
3,362,360	+		CCNA_03201	0.49	+0.9
3,362,370	-		CCNA_03201	0.50	+0.4
3,362,416	-				+1.8
3,362,423	+		CCNA_03201	0.54	-0.6
3,362,426	-		CCNA_03201	0.54	+0.6
3,362,431	-		CCNA_03201	0.54	+2.3
3,362,493	+		CCNA_03201	0.59	+1.5
3,362,501	-		CCNA_03201	0.60	+0.9
3,362,563	-		CCNA_03201	0.65	-1.0
3,362,608	-		CCNA_03201	0.68	-0.1
3,362,755	-		CCNA_03201	0.79	+3.3
3,362,841	-		CCNA_03201	0.86	+0.3
3,362,854	-		CCNA_03201	0.87	+1.3
3,362,872	-		CCNA_03201	0.89	+1.2
3,362,963	+				+0.6
3,362,968	+				+1.0
3,363,079	+				+1.8
3,363,120	-				+2.7
3,363,135	+				+0.2
3,363,154	-				+0.7
3,363,154	-				+1.9
3,363,154	-				+2.9
3,363,172	+				+0.9
3,363,224	+		CCNA_03202	0.14	-0.7
3,363,224	+		CCNA_03202	0.14	-2.1
3,363,224	+		CCNA_03202	0.14	-0.9
3,363,224	+		CCNA_03202	0.14	+0.0
3,363,224	+		CCNA_03202	0.14	+0.4
3,363,224	+		CCNA_03202	0.14	+0.1
3,363,224	+		CCNA_03202	0.14	+0.4
3,363,224	+		CCNA_03202	0.14	-0.3
3,363,224	+		CCNA_03202	0.14	+0.3
3,363,224	+		CCNA_03202	0.14	+0.5
3,363,224	+		CCNA_03202	0.14	+1.0
3,363,224	+		CCNA_03202	0.14	+3.7
3,363,224	+		CCNA_03202	0.14	+1.3
3,363,224	+		CCNA_03202	0.14	+2.0
3,363,224	+		CCNA_03202	0.14	-0.2
3,363,224	+		CCNA_03202	0.14	+0.5
3,363,224	+		CCNA_03202	0.14	+0.3
3,363,224	+		CCNA_03202	0.14	-0.1
3,363,224	+		CCNA_03202	0.14	-0.2
3,363,232	-		CCNA_03202	0.15	-0.6
3,363,232	-		CCNA_03202	0.15	-0.6
3,363,232	-		CCNA_03202	0.15	+0.9
3,363,232	-		CCNA_03202	0.15	+1.0
3,363,232	-		CCNA_03202	0.15	-1.1
3,363,232	-		CCNA_03202	0.15	+2.1
3,363,232	-		CCNA_03202	0.15	+1.3
3,363,232	-		CCNA_03202	0.15	+1.5
3,363,232	-		CCNA_03202	0.15	+2.0
3,363,232	-		CCNA_03202	0.15	-0.2
3,363,232	-		CCNA_03202	0.15	-0.5
3,363,232	-		CCNA_03202	0.15	+0.1
3,363,232	-		CCNA_03202	0.15	+1.8
3,363,232	-		CCNA_03202	0.15	-0.6
3,363,232	-		CCNA_03202	0.15	-1.2
3,363,232	-		CCNA_03202	0.15	-0.7
3,363,232	-		CCNA_03202	0.15	+2.9
3,363,232	-		CCNA_03202	0.15	-0.3
3,363,232	-		CCNA_03202	0.15	+0.7
3,363,232	-		CCNA_03202	0.15	-0.7
3,363,232	-		CCNA_03202	0.15	-0.9
3,363,232	-		CCNA_03202	0.15	+2.1
3,363,232	-		CCNA_03202	0.15	+0.8
3,363,232	-		CCNA_03202	0.15	+0.3
3,363,232	-		CCNA_03202	0.15	+1.5
3,363,232	-		CCNA_03202	0.15	-1.8
3,363,232	-		CCNA_03202	0.15	-0.7
3,363,240	-		CCNA_03202	0.16	+0.9
3,363,247	-		CCNA_03202	0.17	+0.9
3,363,266	+		CCNA_03202	0.20	+2.0
3,363,274	-		CCNA_03202	0.22	+2.0
3,363,289	-		CCNA_03202	0.24	-0.2
3,363,328	-		CCNA_03202	0.30	+0.8
3,363,331	+		CCNA_03202	0.31	+0.3
3,363,333	-		CCNA_03202	0.31	+1.3
3,363,348	+		CCNA_03202	0.33	+1.8
3,363,354	-		CCNA_03202	0.34	+1.8
3,363,397	-		CCNA_03202	0.41	+0.7
3,363,399	+		CCNA_03202	0.41	+0.5
3,363,401	+		CCNA_03202	0.42	+0.9
3,363,401	+		CCNA_03202	0.42	+0.9
3,363,401	+		CCNA_03202	0.42	+1.2
3,363,401	+		CCNA_03202	0.42	+1.8
3,363,401	+		CCNA_03202	0.42	-0.5
3,363,401	+		CCNA_03202	0.42	-0.9
3,363,401	+		CCNA_03202	0.42	+1.5
3,363,401	+		CCNA_03202	0.42	-0.6
3,363,401	+		CCNA_03202	0.42	+0.6
3,363,409	-		CCNA_03202	0.43	+1.2
3,363,409	-		CCNA_03202	0.43	+0.6
3,363,409	-		CCNA_03202	0.43	-1.2
3,363,409	-		CCNA_03202	0.43	+2.1
3,363,409	-		CCNA_03202	0.43	+0.6
3,363,409	-		CCNA_03202	0.43	+0.6
3,363,409	-		CCNA_03202	0.43	+2.2
3,363,409	-		CCNA_03202	0.43	-0.0
3,363,409	-		CCNA_03202	0.43	-0.5
3,363,409	-		CCNA_03202	0.43	-1.6
3,363,409	-		CCNA_03202	0.43	+1.0
3,363,409	-		CCNA_03202	0.43	-0.6
3,363,409	-		CCNA_03202	0.43	+1.5
3,363,409	-		CCNA_03202	0.43	+0.4
3,363,409	-		CCNA_03202	0.43	+0.2
3,363,409	-		CCNA_03202	0.43	+0.5
3,363,409	-		CCNA_03202	0.43	-0.4
3,363,409	-		CCNA_03202	0.43	-1.0
3,363,409	-		CCNA_03202	0.43	-0.9
3,363,409	-		CCNA_03202	0.43	-0.5
3,363,414	-		CCNA_03202	0.44	+0.6
3,363,494	-		CCNA_03202	0.57	+0.1
3,363,494	-		CCNA_03202	0.57	+0.6
3,363,495	-		CCNA_03202	0.57	+1.9
3,363,516	-		CCNA_03202	0.60	+0.2
3,363,516	-		CCNA_03202	0.60	-0.1
3,363,521	-		CCNA_03202	0.61	+0.0
3,363,521	-		CCNA_03202	0.61	+3.1
3,363,528	-		CCNA_03202	0.62	-0.9
3,363,529	-		CCNA_03202	0.62	+0.4
3,363,580	-		CCNA_03202	0.70	+1.7
3,363,582	+		CCNA_03202	0.71	+0.0
3,363,585	-		CCNA_03202	0.71	+0.1
3,363,632	+		CCNA_03202	0.79	+0.6
3,363,673	+		CCNA_03202	0.85	-0.4
3,363,688	+		CCNA_03202	0.88	-0.5
3,363,688	+				+3.0
3,363,696	-		CCNA_03202	0.89	-1.1
3,363,696	-		CCNA_03202	0.89	-1.5
3,363,723	+				+0.4
3,363,723	+				-0.6
3,363,723	+				-0.3
3,363,723	+				+0.3
3,363,731	-				+0.1
3,363,731	-				-1.3
3,363,731	-				-0.2
3,363,731	-				+0.1
3,363,731	-				-0.3
3,363,731	-				+1.3
3,363,731	-				+1.3
3,363,731	-				-0.6
3,363,731	-				+0.4
3,363,731	-				-0.1
3,363,731	-				-0.4
3,363,741	-				+0.9
3,363,769	+				+1.2
3,363,769	+				-0.8
3,363,774	+				-0.2
3,363,777	-				+0.3
3,363,777	-				-0.1
3,363,777	-				+1.3
3,363,777	-				+0.9
3,363,777	-				+0.0
3,363,777	-				+1.5
3,363,777	-				+2.4
3,363,777	-				+0.5
3,363,779	+				+0.2
3,363,779	+				+1.5
3,363,779	+				+1.3
3,363,779	+				+0.1
3,363,779	+				+0.4
3,363,779	+				+1.8
3,363,779	+				-0.7
3,363,787	-				-0.3
3,363,787	-				+0.3
3,363,787	-				-1.4
3,363,787	-				+0.4
3,363,787	-				+0.1
3,363,787	-				+0.9
3,363,787	-				+1.2
3,363,787	-				-1.2
3,363,787	-				+0.6
3,363,791	+				+1.3
3,363,791	+				+1.8
3,363,791	+				+1.3
3,363,799	-				+0.9
3,363,808	+				+1.0
3,363,815	+				-0.5
3,363,826	+				-1.9
3,363,833	-				-2.0
3,363,851	+				-0.1
3,363,852	+				-0.8
3,363,858	+				-0.4
3,363,858	+				+1.0
3,363,859	-				-0.1
3,363,859	-				+0.3
3,363,859	-				-1.7
3,363,860	-				+0.3
3,363,866	-				+1.3
3,363,866	-				-0.1
3,363,866	-				+0.8
3,363,890	-				-1.3
3,363,901	+				+0.3
3,363,903	+				-0.1
3,363,904	-				-0.0
3,363,909	-				+3.3
3,363,978	+		CCNA_03203	0.12	+1.5
3,363,984	+		CCNA_03203	0.12	-0.7
3,363,984	+		CCNA_03203	0.12	+0.0
3,363,984	+		CCNA_03203	0.12	-0.9
3,363,985	+		CCNA_03203	0.13	+1.5
3,363,992	+		CCNA_03203	0.13	-1.0
3,363,992	+		CCNA_03203	0.13	+0.7
3,363,992	-		CCNA_03203	0.13	+1.9
3,363,993	-		CCNA_03203	0.13	-0.9
3,363,993	-		CCNA_03203	0.13	+0.3
3,363,993	-		CCNA_03203	0.13	+0.5
3,364,017	-		CCNA_03203	0.16	+1.4
3,364,035	-		CCNA_03203	0.18	-0.2
3,364,035	-		CCNA_03203	0.18	-1.8
3,364,111	-		CCNA_03203	0.25	-0.2
3,364,119	+		CCNA_03203	0.26	+0.9
3,364,199	+		CCNA_03203	0.34	+1.2
3,364,199	+		CCNA_03203	0.34	+0.9
3,364,207	-		CCNA_03203	0.35	-1.8
3,364,234	+		CCNA_03203	0.38	+3.8
3,364,234	+		CCNA_03203	0.38	+0.7
3,364,240	-		CCNA_03203	0.39	+0.4
3,364,242	-		CCNA_03203	0.39	+0.6
3,364,263	+		CCNA_03203	0.41	+0.3
3,364,273	+		CCNA_03203	0.42	+0.7
3,364,281	-		CCNA_03203	0.43	+0.6
3,364,304	-		CCNA_03203	0.45	+1.3
3,364,329	+		CCNA_03203	0.48	+0.3
3,364,339	+		CCNA_03203	0.49	+0.3
3,364,347	-		CCNA_03203	0.50	+0.1
3,364,378	+		CCNA_03203	0.53	+1.1
3,364,386	-		CCNA_03203	0.54	+1.0
3,364,386	-		CCNA_03203	0.54	-1.0
3,364,386	-		CCNA_03203	0.54	-0.9
3,364,386	-		CCNA_03203	0.54	+2.0
3,364,427	-		CCNA_03203	0.58	+1.6
3,364,467	+		CCNA_03203	0.62	-1.5
3,364,467	+		CCNA_03203	0.62	-0.5
3,364,467	+		CCNA_03203	0.62	+0.8
3,364,475	-		CCNA_03203	0.63	+0.1
3,364,475	-		CCNA_03203	0.63	+1.3
3,364,475	-		CCNA_03203	0.63	+0.2
3,364,517	+		CCNA_03203	0.67	-1.3
3,364,527	+		CCNA_03203	0.68	+0.2
3,364,576	+		CCNA_03203	0.73	+0.8
3,364,591	+		CCNA_03203	0.75	+1.5
3,364,591	+		CCNA_03203	0.75	-0.3
3,364,591	+		CCNA_03203	0.75	+0.7
3,364,620	+		CCNA_03203	0.78	-0.2
3,364,620	+		CCNA_03203	0.78	+0.5
3,364,646	+		CCNA_03203	0.80	+0.5
3,364,664	-		CCNA_03203	0.82	+0.9