Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03105

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
3,254,916	+		CCNA_03104	0.34	+0.5
3,254,927	+		CCNA_03104	0.35	-0.2
3,254,935	-		CCNA_03104	0.35	-0.1
3,255,053	+		CCNA_03104	0.46	-0.3
3,255,053	-		CCNA_03104	0.46	-0.4
3,255,058	+		CCNA_03104	0.47	+0.5
3,255,098	-		CCNA_03104	0.50	-0.6
3,255,103	+		CCNA_03104	0.51	-1.5
3,255,135	+		CCNA_03104	0.53	-0.9
3,255,167	+		CCNA_03104	0.56	-0.6
3,255,167	+		CCNA_03104	0.56	-3.1
3,255,167	+		CCNA_03104	0.56	-1.7
3,255,167	+		CCNA_03104	0.56	+1.2
3,255,196	-		CCNA_03104	0.59	+0.2
3,255,282	-		CCNA_03104	0.67	+0.1
3,255,357	+		CCNA_03104	0.73	-0.8
3,255,359	-		CCNA_03104	0.74	+1.1
3,255,368	+		CCNA_03104	0.74	-0.4
3,255,368	+		CCNA_03104	0.74	-0.1
3,255,411	+		CCNA_03104	0.78	+0.2
3,255,413	-		CCNA_03104	0.78	-0.3
3,255,437	+		CCNA_03104	0.81	+1.1
3,255,534	-		CCNA_03104	0.89	-0.6
3,255,534	-		CCNA_03104	0.89	+0.5
3,255,622	-				+0.3
3,255,647	+				+0.9
3,255,655	-				+0.5
3,255,655	-				+0.7
3,255,704	+				-0.6
3,255,744	-				+0.8
3,255,759	+				+1.1
3,255,772	-				+2.0
3,255,789	+				+1.0
3,255,789	-				+1.9
3,255,812	+				-0.7
3,255,820	-				+2.8
3,255,862	-				+3.2
3,255,862	-				+3.8
3,255,888	-				+3.8
3,255,900	-		CCNA_03105	0.11	+3.6
3,255,936	-		CCNA_03105	0.17	+3.3
3,255,936	-		CCNA_03105	0.17	+3.5
3,256,051	+		CCNA_03105	0.34	+0.2
3,256,059	-		CCNA_03105	0.35	+3.5
3,256,091	-		CCNA_03105	0.40	+3.3
3,256,195	+		CCNA_03105	0.56	-0.5
3,256,197	+		CCNA_03105	0.57	+0.8
3,256,207	+		CCNA_03105	0.58	+0.0
3,256,212	+		CCNA_03105	0.59	+0.2
3,256,215	-		CCNA_03105	0.59	+1.8
3,256,220	-		CCNA_03105	0.60	+1.9
3,256,220	-		CCNA_03105	0.60	+2.5
3,256,220	-		CCNA_03105	0.60	+2.7
3,256,220	-		CCNA_03105	0.60	+2.6
3,256,282	+		CCNA_03105	0.70	+0.5
3,256,290	-		CCNA_03105	0.71	+2.7
3,256,338	-		CCNA_03105	0.78	+1.1
3,256,364	+		CCNA_03105	0.82	+1.2
3,256,383	+		CCNA_03105	0.85	+2.2
3,256,416	-				+2.2
3,256,418	+				+3.5
3,256,418	+				+0.7
3,256,482	+				-0.3
3,256,487	+				+0.0
3,256,487	+				+1.2
3,256,487	+				+1.7
3,256,495	-				-2.4
3,256,514	+				+1.8
3,256,596	+		CCNA_03106	0.22	+0.4
3,256,596	+		CCNA_03106	0.22	-1.1
3,256,604	-		CCNA_03106	0.25	-1.6
3,256,604	-		CCNA_03106	0.25	+0.2
3,256,604	-		CCNA_03106	0.25	+1.5
3,256,615	-		CCNA_03106	0.29	+0.5
3,256,691	+		CCNA_03106	0.57	+0.2
3,256,730	-		CCNA_03106	0.71	+3.3
3,256,756	+		CCNA_03106	0.80	+1.1
3,256,766	+		CCNA_03106	0.84	+0.7
3,256,768	-		CCNA_03106	0.84	-0.0
3,256,769	-		CCNA_03106	0.85	-0.1
3,256,805	+				+0.7
3,256,805	+				-0.7
3,256,811	-				+0.6
3,256,846	-				-0.6
3,256,913	-				+0.2
3,256,994	-				-0.3
3,257,004	+				+2.2
3,257,023	-				+1.6
3,257,063	-				-1.0
3,257,155	+		CCNA_03107	0.30	+2.1
3,257,160	+		CCNA_03107	0.31	+1.7
3,257,168	-		CCNA_03107	0.33	+0.9
3,257,168	-		CCNA_03107	0.33	+1.4
3,257,279	-		CCNA_03107	0.59	-0.3
3,257,279	-		CCNA_03107	0.59	+0.6
3,257,301	+		CCNA_03107	0.65	+2.2
3,257,301	+		CCNA_03107	0.65	+0.8
3,257,306	+		CCNA_03107	0.66	+1.9
3,257,306	+		CCNA_03107	0.66	+2.0
3,257,306	+		CCNA_03107	0.66	+2.2
3,257,347	-		CCNA_03107	0.75	-0.4
3,257,370	+		CCNA_03107	0.81	+2.4
3,257,433	-				+1.1