Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02842

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,994,567	+		CCNA_02840	0.31	+1.3
2,994,567	+		CCNA_02840	0.31	+1.5
2,994,611	+		CCNA_02840	0.36	+1.4
2,994,630	+		CCNA_02840	0.38	+1.8
2,994,648	-		CCNA_02840	0.40	+1.4
2,994,670	+		CCNA_02840	0.42	+1.1
2,994,670	+		CCNA_02840	0.42	-0.8
2,994,690	-		CCNA_02840	0.45	-0.5
2,994,727	+		CCNA_02840	0.49	-0.8
2,994,735	-		CCNA_02840	0.50	+1.2
2,994,735	-		CCNA_02840	0.50	+0.7
2,994,761	+		CCNA_02840	0.53	-0.4
2,994,795	+		CCNA_02840	0.56	+2.8
2,994,842	-		CCNA_02840	0.62	+1.3
2,994,845	+		CCNA_02840	0.62	+1.4
2,994,848	-		CCNA_02840	0.62	+1.4
2,994,853	-		CCNA_02840	0.63	+1.1
2,994,889	-		CCNA_02840	0.67	+2.3
2,994,908	+		CCNA_02840	0.69	-0.2
2,994,908	+		CCNA_02840	0.69	+2.8
2,994,915	+		CCNA_02840	0.70	+1.6
2,994,915	+		CCNA_02840	0.70	+1.6
2,994,939	+		CCNA_02840	0.73	+0.8
2,994,939	+		CCNA_02840	0.73	+1.9
2,994,939	+		CCNA_02840	0.73	+1.1
2,994,947	-		CCNA_02840	0.74	+1.7
2,994,961	+		CCNA_02840	0.75	+0.7
2,994,971	+		CCNA_02840	0.76	+1.1
2,994,997	-		CCNA_02840	0.79	+0.6
2,995,000	-		CCNA_02840	0.80	+0.2
2,995,016	-				+1.9
2,995,068	+		CCNA_02840	0.87	+1.5
2,995,096	+				+1.3
2,995,096	+				+2.5
2,995,104	-				+0.6
2,995,104	-				+2.5
2,995,104	-				-0.3
2,995,105	+				+3.1
2,995,105	+				+1.0
2,995,108	-				+1.5
2,995,113	-				+0.6
2,995,162	+				+1.1
2,995,171	+				+1.9
2,995,176	+				+1.6
2,995,209	+				+1.1
2,995,227	-				-1.1
2,995,230	+				+0.9
2,995,238	-				+0.2
2,995,285	-				-1.1
2,995,326	+		CCNA_02841	0.24	+1.1
2,995,334	-		CCNA_02841	0.27	+1.7
2,995,372	-		CCNA_02841	0.43	+1.1
2,995,425	+		CCNA_02841	0.65	+3.4
2,995,440	+		CCNA_02841	0.71	-0.1
2,995,456	-		CCNA_02841	0.78	+0.2
2,995,557	+				+1.5
2,995,569	+				-0.5
2,995,574	+				-0.5
2,995,574	+				+1.2
2,995,574	+				+2.7
2,995,582	-				+1.0
2,995,582	-				+0.5
2,995,582	-				-0.2
2,995,582	-				-0.3
2,995,582	-				-0.7
2,995,582	-				-0.5
2,995,582	-				+0.2
2,995,616	+				+0.0
2,995,616	+				-0.3
2,995,653	+				-0.0
2,995,656	-				+0.2
2,995,661	-				-0.2
2,995,662	-				+0.5
2,995,721	+		CCNA_02842	0.13	+1.1
2,995,721	-		CCNA_02842	0.13	+1.0
2,995,738	+		CCNA_02842	0.14	-1.1
2,995,824	+		CCNA_02842	0.20	+1.4
2,995,869	+		CCNA_02842	0.23	+0.1
2,995,869	+		CCNA_02842	0.23	-1.6
2,995,878	-		CCNA_02842	0.24	+0.6
2,995,901	-		CCNA_02842	0.26	+0.0
2,995,917	+		CCNA_02842	0.27	+1.0
2,995,947	-		CCNA_02842	0.29	+0.9
2,995,947	-		CCNA_02842	0.29	-0.4
2,995,951	+		CCNA_02842	0.29	+0.9
2,995,988	+		CCNA_02842	0.32	-0.4
2,996,026	-		CCNA_02842	0.35	-0.1
2,996,040	-		CCNA_02842	0.36	-0.1
2,996,049	+		CCNA_02842	0.36	+2.1
2,996,068	+		CCNA_02842	0.38	+1.0
2,996,068	+		CCNA_02842	0.38	+0.0
2,996,076	-		CCNA_02842	0.38	+2.1
2,996,076	-		CCNA_02842	0.38	+1.2
2,996,098	+		CCNA_02842	0.40	+0.0
2,996,109	-		CCNA_02842	0.41	+1.1
2,996,111	-		CCNA_02842	0.41	-0.4
2,996,111	-		CCNA_02842	0.41	-0.4
2,996,133	-		CCNA_02842	0.42	+2.7
2,996,133	-		CCNA_02842	0.42	+0.5
2,996,133	-		CCNA_02842	0.42	-0.1
2,996,174	+		CCNA_02842	0.45	-0.5
2,996,178	+		CCNA_02842	0.45	+1.1
2,996,186	-		CCNA_02842	0.46	+1.0
2,996,203	-		CCNA_02842	0.47	+0.2
2,996,235	+		CCNA_02842	0.49	+1.1
2,996,322	+		CCNA_02842	0.56	+0.4
2,996,325	+		CCNA_02842	0.56	+2.4
2,996,333	-		CCNA_02842	0.56	+1.0
2,996,335	+		CCNA_02842	0.57	+1.0
2,996,347	+		CCNA_02842	0.57	+1.7
2,996,355	-		CCNA_02842	0.58	+0.1
2,996,355	-		CCNA_02842	0.58	-0.9
2,996,355	-		CCNA_02842	0.58	+0.6
2,996,355	-		CCNA_02842	0.58	-0.5
2,996,355	-		CCNA_02842	0.58	-1.0
2,996,355	-		CCNA_02842	0.58	-0.6
2,996,366	-		CCNA_02842	0.59	-1.9
2,996,367	+		CCNA_02842	0.59	-0.2
2,996,372	+		CCNA_02842	0.59	+0.4
2,996,375	-		CCNA_02842	0.59	+0.9
2,996,375	-		CCNA_02842	0.59	-1.1
2,996,380	-		CCNA_02842	0.60	-0.9
2,996,418	+		CCNA_02842	0.62	+1.9
2,996,480	+		CCNA_02842	0.67	-0.4
2,996,538	-		CCNA_02842	0.71	+2.4
2,996,545	-		CCNA_02842	0.71	+0.5
2,996,545	-		CCNA_02842	0.71	-1.1
2,996,545	-		CCNA_02842	0.71	+1.1
2,996,557	+		CCNA_02842	0.72	+1.1
2,996,564	+		CCNA_02842	0.73	+3.6
2,996,564	+		CCNA_02842	0.73	+3.8
2,996,564	+		CCNA_02842	0.73	+3.8
2,996,564	+		CCNA_02842	0.73	+3.6
2,996,564	+		CCNA_02842	0.73	+3.6
2,996,564	+		CCNA_02842	0.73	+3.2
2,996,565	-		CCNA_02842	0.73	+2.7
2,996,565	-		CCNA_02842	0.73	+1.6
2,996,565	-		CCNA_02842	0.73	+0.0
2,996,565	-		CCNA_02842	0.73	+0.8
2,996,582	-		CCNA_02842	0.74	-0.0
2,996,594	+		CCNA_02842	0.75	+1.1
2,996,594	+		CCNA_02842	0.75	-0.5
2,996,602	-		CCNA_02842	0.76	+0.9
2,996,602	-		CCNA_02842	0.76	-1.0
2,996,602	-		CCNA_02842	0.76	+2.1
2,996,614	+		CCNA_02842	0.76	+1.5
2,996,639	-		CCNA_02842	0.78	+1.4
2,996,654	-		CCNA_02842	0.79	-2.4
2,996,721	-		CCNA_02842	0.84	+0.6
2,996,790	-		CCNA_02842	0.89	-0.5
2,996,808	-				+0.7
2,996,808	-				+1.0
2,996,825	-				+1.9
2,996,851	-				+1.4
2,996,895	-				-0.8
2,996,928	-				+0.2
2,996,967	+				+0.7
2,996,987	-		CCNA_02843	0.12	+1.2
2,997,023	+		CCNA_02843	0.24	+1.4
2,997,023	-		CCNA_02843	0.24	+0.9
2,997,042	-		CCNA_02843	0.30	+2.3
2,997,112	-		CCNA_02843	0.53	+2.3
2,997,148	+		CCNA_02843	0.65	+1.1
2,997,156	-		CCNA_02843	0.68	+0.0
2,997,156	-		CCNA_02843	0.68	+0.5
2,997,240	-				+1.3
2,997,241	-				+0.7
2,997,254	-				+3.1
2,997,275	+				+3.9
2,997,280	+				+0.5
2,997,283	-				+2.3
2,997,319	+		CCNA_02844	0.25	+0.8
2,997,472	-				+2.4
2,997,472	-				+2.1
2,997,533	+				-0.9
2,997,541	-				+0.2
2,997,560	-				-0.0
2,997,567	+				+0.1
2,997,567	+				-1.0
2,997,575	-				-0.3
2,997,591	+		CCNA_02845	0.11	-0.2
2,997,613	+		CCNA_02845	0.14	-0.2
2,997,627	-		CCNA_02845	0.17	-1.2
2,997,646	+		CCNA_02845	0.19	+1.4
2,997,647	-		CCNA_02845	0.19	-0.6
2,997,654	-		CCNA_02845	0.21	-1.1
2,997,654	-		CCNA_02845	0.21	+0.1
2,997,684	-		CCNA_02845	0.25	+0.2
2,997,753	-		CCNA_02845	0.35	-2.1
2,997,753	-		CCNA_02845	0.35	-0.5
2,997,792	-		CCNA_02845	0.41	-0.3
2,997,800	+		CCNA_02845	0.42	+0.6
2,997,808	-		CCNA_02845	0.43	+1.1
2,997,808	-		CCNA_02845	0.43	-1.2
2,997,877	+		CCNA_02845	0.54	+0.2
2,997,883	+		CCNA_02845	0.55	+0.6
2,997,884	-		CCNA_02845	0.55	-0.7
2,997,884	-		CCNA_02845	0.55	-0.6
2,997,884	-		CCNA_02845	0.55	+2.5
2,997,885	-		CCNA_02845	0.55	-0.9
2,997,892	+		CCNA_02845	0.56	+3.8
2,997,930	+		CCNA_02845	0.62	+0.4
2,997,938	-		CCNA_02845	0.63	+0.6