Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02837

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,989,060	-		CCNA_02835	0.19	+0.3
2,989,185	-		CCNA_02835	0.39	+1.5
2,989,216	-		CCNA_02835	0.44	-0.4
2,989,216	-		CCNA_02835	0.44	+0.8
2,989,216	-		CCNA_02835	0.44	+1.5
2,989,223	-		CCNA_02835	0.45	+1.5
2,989,228	-		CCNA_02835	0.46	+0.7
2,989,434	-		CCNA_02835	0.79	-1.3
2,989,505	-				+0.4
2,989,579	-				+1.4
2,989,579	-				+1.1
2,989,581	+				+0.5
2,989,589	-				+1.3
2,989,589	-				+1.5
2,989,734	-		CCNA_02836	0.38	+1.9
2,989,759	-		CCNA_02836	0.43	+1.7
2,989,782	+		CCNA_02836	0.48	+1.3
2,989,830	-		CCNA_02836	0.59	+3.2
2,989,831	-		CCNA_02836	0.59	+2.7
2,989,831	-		CCNA_02836	0.59	+2.9
2,989,878	-		CCNA_02836	0.69	+2.0
2,989,888	-		CCNA_02836	0.72	+2.6
2,989,930	-		CCNA_02836	0.81	+0.6
2,990,000	-				+1.0
2,990,035	-				+2.6
2,990,056	-				-1.0
2,990,057	+				+0.3
2,990,154	+		CCNA_02837	0.22	+4.2
2,990,158	-		CCNA_02837	0.22	+0.5
2,990,161	+		CCNA_02837	0.23	-1.7
2,990,173	+		CCNA_02837	0.25	+0.7
2,990,246	+		CCNA_02837	0.38	-0.5
2,990,251	+		CCNA_02837	0.39	+1.6
2,990,307	+		CCNA_02837	0.49	-1.3
2,990,308	-		CCNA_02837	0.49	-1.3
2,990,407	+		CCNA_02837	0.67	+1.5
2,990,407	+		CCNA_02837	0.67	+0.1
2,990,407	+		CCNA_02837	0.67	+1.2
2,990,407	+				+3.0
2,990,407	+		CCNA_02837	0.67	+1.5
2,990,407	+		CCNA_02837	0.67	+1.8
2,990,415	-		CCNA_02837	0.68	-1.0
2,990,415	-		CCNA_02837	0.68	+1.2
2,990,429	+		CCNA_02837	0.71	-0.5
2,990,452	+		CCNA_02837	0.75	-1.0
2,990,470	-		CCNA_02837	0.78	+0.3
2,990,476	+		CCNA_02837	0.79	-0.7
2,990,507	+		CCNA_02837	0.84	+1.5
2,990,507	+		CCNA_02837	0.84	+0.3
2,990,515	-		CCNA_02837	0.86	-1.3
2,990,524	-		CCNA_02837	0.88	+0.4
2,990,526	+		CCNA_02837	0.88	+0.6
2,990,566	+				+0.3
2,990,588	+				+0.7
2,990,596	-				-0.7
2,990,617	-				-1.3
2,990,645	+				-0.5
2,990,645	+				+0.2
2,990,645	+				+0.8
2,990,651	+				-1.7
2,990,653	-				-0.3
2,990,653	-				+1.5
2,990,653	-				+1.2
2,990,693	+		CCNA_02838	0.18	+4.6
2,990,752	+		CCNA_02838	0.33	-0.5
2,990,760	-		CCNA_02838	0.35	-0.5
2,990,760	-		CCNA_02838	0.35	+0.5
2,990,762	+		CCNA_02838	0.35	+2.3
2,990,770	-		CCNA_02838	0.37	+1.2
2,990,783	+		CCNA_02838	0.41	+2.5
2,990,801	+		CCNA_02838	0.45	-0.8
2,990,801	+		CCNA_02838	0.45	-1.2
2,990,809	-		CCNA_02838	0.47	-0.6
2,990,838	-		CCNA_02838	0.54	+0.2
2,990,921	+		CCNA_02838	0.75	+1.7
2,990,921	+		CCNA_02838	0.75	+0.2
2,990,921	+		CCNA_02838	0.75	+0.2
2,990,921	+		CCNA_02838	0.75	+2.0
2,990,925	+		CCNA_02838	0.76	-0.6
2,990,931	+		CCNA_02838	0.77	-0.2
2,990,931	+		CCNA_02838	0.77	+0.2
2,990,931	+		CCNA_02838	0.77	-0.6
2,990,931	+		CCNA_02838	0.77	+1.0
2,990,931	+		CCNA_02838	0.77	-0.5
2,990,931	+		CCNA_02838	0.77	+0.7
2,990,931	+		CCNA_02838	0.77	-1.0
2,990,931	+		CCNA_02838	0.77	+0.9
2,990,931	+		CCNA_02838	0.77	+0.5
2,990,931	+		CCNA_02838	0.77	+0.9
2,990,937	+		CCNA_02838	0.79	+2.6
2,990,939	-		CCNA_02838	0.79	+0.6
2,990,939	-		CCNA_02838	0.79	+2.6
2,990,939	-		CCNA_02838	0.79	+0.6
2,990,939	-		CCNA_02838	0.79	-0.1
2,990,939	-		CCNA_02838	0.79	+0.3
2,990,939	-		CCNA_02838	0.79	-0.6
2,990,939	-		CCNA_02838	0.79	+2.3
2,990,939	-		CCNA_02838	0.79	-0.0
2,990,939	-		CCNA_02838	0.79	-0.3
2,990,939	-		CCNA_02838	0.79	+1.8
2,990,939	-		CCNA_02838	0.79	+1.6
2,990,964	+		CCNA_02838	0.86	+1.0
2,990,965	+		CCNA_02838	0.86	+0.9
2,990,965	+		CCNA_02838	0.86	-1.0
2,990,973	-		CCNA_02838	0.88	-1.5
2,990,983	+				-0.2
2,990,991	+				+0.0
2,991,011	+				+2.0
2,991,019	-				+1.6
2,991,019	-				+0.1
2,991,032	-				+0.2
2,991,036	+				-1.1
2,991,053	-				+1.3
2,991,058	-				+1.2
2,991,131	+				-0.2
2,991,139	-				-0.3
2,991,174	+				+1.3
2,991,188	-				+1.3
2,991,215	+				+2.0
2,991,223	-				+0.1
2,991,237	+				-0.7
2,991,237	+				+0.2
2,991,245	-				+1.3
2,991,245	-				-0.6
2,991,245	-				-0.6
2,991,275	+				+0.3
2,991,275	+				-0.2
2,991,275	+				+0.4
2,991,283	-				+1.5
2,991,283	-				+0.7
2,991,283	-				+0.5
2,991,283	-				+0.2
2,991,283	-				-0.9
2,991,285	+				+1.2
2,991,305	-				+1.3
2,991,305	-				+1.2
2,991,339	+				+2.6
2,991,347	-				+0.2
2,991,355	+				-0.8
2,991,377	-				+0.6
2,991,459	+				+1.0
2,991,467	-				+1.3
2,991,467	-				+0.2
2,991,467	-				+0.1
2,991,467	-				+0.8
2,991,467	-				-0.3
2,991,472	+				+0.5
2,991,510	-				-0.9
2,991,548	-				-0.7