Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02774

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,932,716	+				+0.1
2,932,731	+				+0.7
2,932,739	+				-0.3
2,932,757	+				+0.1
2,932,758	-				+4.7
2,932,882	+		CCNA_02773	0.17	+1.9
2,932,882	+		CCNA_02773	0.17	+0.7
2,932,882	+		CCNA_02773	0.17	+0.8
2,932,882	+		CCNA_02773	0.17	+0.8
2,932,882	+		CCNA_02773	0.17	+0.7
2,932,882	+		CCNA_02773	0.17	+0.9
2,932,882	+		CCNA_02773	0.17	+0.4
2,932,882	+		CCNA_02773	0.17	-0.1
2,932,887	+		CCNA_02773	0.18	+0.5
2,932,890	-		CCNA_02773	0.18	+0.7
2,932,890	-		CCNA_02773	0.18	+0.5
2,932,911	-		CCNA_02773	0.21	-0.8
2,932,934	+		CCNA_02773	0.24	+0.1
2,932,948	+		CCNA_02773	0.26	+2.4
2,932,956	-		CCNA_02773	0.27	+0.7
2,932,980	+		CCNA_02773	0.30	-0.1
2,932,988	-		CCNA_02773	0.31	+0.3
2,932,996	+		CCNA_02773	0.32	+1.1
2,933,039	-		CCNA_02773	0.38	+2.4
2,933,060	+		CCNA_02773	0.41	-0.1
2,933,067	+		CCNA_02773	0.42	-0.5
2,933,067	+		CCNA_02773	0.42	+1.5
2,933,067	+		CCNA_02773	0.42	+1.1
2,933,075	-		CCNA_02773	0.43	+2.4
2,933,075	-		CCNA_02773	0.43	-0.6
2,933,075	-		CCNA_02773	0.43	-1.5
2,933,104	+		CCNA_02773	0.47	-0.1
2,933,112	-		CCNA_02773	0.48	-0.1
2,933,138	+		CCNA_02773	0.51	+0.3
2,933,138	+		CCNA_02773	0.51	-0.3
2,933,158	-		CCNA_02773	0.54	+1.1
2,933,204	+		CCNA_02773	0.60	+1.9
2,933,207	-		CCNA_02773	0.60	-0.9
2,933,207	-		CCNA_02773	0.60	+0.3
2,933,207	-		CCNA_02773	0.60	+0.4
2,933,207	-		CCNA_02773	0.60	-1.4
2,933,226	-		CCNA_02773	0.63	+1.9
2,933,226	-		CCNA_02773	0.63	+1.1
2,933,228	+		CCNA_02773	0.63	-1.5
2,933,228	+		CCNA_02773	0.63	+0.8
2,933,228	+		CCNA_02773	0.63	+0.6
2,933,228	+		CCNA_02773	0.63	-0.0
2,933,228	+		CCNA_02773	0.63	-0.3
2,933,228	+		CCNA_02773	0.63	+1.9
2,933,228	+		CCNA_02773	0.63	+0.8
2,933,236	-		CCNA_02773	0.64	+0.4
2,933,236	-				+2.7
2,933,238	+		CCNA_02773	0.64	+0.4
2,933,238	+		CCNA_02773	0.64	+0.4
2,933,270	-		CCNA_02773	0.69	+0.8
2,933,292	-		CCNA_02773	0.72	+0.2
2,933,309	+		CCNA_02773	0.74	+0.5
2,933,318	-		CCNA_02773	0.75	+0.9
2,933,397	+		CCNA_02773	0.86	+0.1
2,933,397	+		CCNA_02773	0.86	+0.6
2,933,397	+		CCNA_02773	0.86	+0.1
2,933,397	+		CCNA_02773	0.86	-0.3
2,933,402	+		CCNA_02773	0.86	+0.0
2,933,405	-		CCNA_02773	0.87	+0.3
2,933,405	-		CCNA_02773	0.87	+0.5
2,933,449	+				+0.7
2,933,456	-				-0.3
2,933,497	+				-0.3
2,933,506	-				+1.0
2,933,507	-				-1.5
2,933,507	-				+0.4
2,933,538	-				+1.1
2,933,538	-				+0.1
2,933,565	-				-0.1
2,933,588	+				+0.9
2,933,588	+				+2.4
2,933,596	-				+1.4
2,933,596	-				+2.4
2,933,605	-				+0.4
2,933,623	+				-0.6
2,933,632	-				+0.8
2,933,643	-				+0.4
2,933,671	+				-0.4
2,933,696	-		CCNA_02774	0.12	+1.5
2,933,703	+		CCNA_02774	0.14	+0.4
2,933,717	-		CCNA_02774	0.17	+2.7
2,933,747	+		CCNA_02774	0.24	+2.0
2,933,747	+		CCNA_02774	0.24	+1.7
2,933,752	+		CCNA_02774	0.25	+3.0
2,933,767	+		CCNA_02774	0.28	-0.8
2,933,767	+		CCNA_02774	0.28	+1.9
2,933,775	-		CCNA_02774	0.30	+0.8
2,933,775	-		CCNA_02774	0.30	+0.1
2,933,775	-		CCNA_02774	0.30	+2.2
2,933,775	-		CCNA_02774	0.30	-0.1
2,933,775	-		CCNA_02774	0.30	-0.9
2,933,780	-		CCNA_02774	0.31	+1.4
2,933,785	+		CCNA_02774	0.32	-0.0
2,933,827	+		CCNA_02774	0.41	+2.4
2,933,827	+		CCNA_02774	0.41	-0.5
2,933,839	+		CCNA_02774	0.44	-0.8
2,933,849	+		CCNA_02774	0.46	+0.6
2,933,850	-		CCNA_02774	0.46	+1.5
2,933,852	+		CCNA_02774	0.46	+0.1
2,933,852	+		CCNA_02774	0.46	+2.5
2,933,857	-		CCNA_02774	0.47	-0.1
2,933,860	-		CCNA_02774	0.48	-1.3
2,933,882	+		CCNA_02774	0.53	+0.6
2,933,890	-		CCNA_02774	0.55	-1.1
2,933,900	+		CCNA_02774	0.57	+0.2
2,933,900	+		CCNA_02774	0.57	+1.7
2,933,900	+		CCNA_02774	0.57	+0.3
2,933,908	-		CCNA_02774	0.59	-0.2
2,933,908	-		CCNA_02774	0.59	-0.5
2,933,934	+		CCNA_02774	0.64	+1.2
2,933,942	-		CCNA_02774	0.66	-0.3
2,933,946	-		CCNA_02774	0.67	+1.9
2,934,075	-				+1.9
2,934,088	+				+0.2
2,934,105	+				+0.2
2,934,105	+				+0.9
2,934,105	+				-0.3
2,934,105	+				-0.3
2,934,105	+				-0.0
2,934,105	+				-0.4
2,934,110	+				+1.6
2,934,110	+				+0.3
2,934,110	+				-0.0
2,934,110	+				-1.3
2,934,110	+				-1.7
2,934,113	-				-0.5
2,934,113	-				+0.1
2,934,113	-				-1.4
2,934,113	-				-0.7
2,934,113	-				+0.1
2,934,118	-				+1.5
2,934,118	-				+0.4
2,934,118	-				+1.4
2,934,118	-				-0.9
2,934,118	-				+0.7
2,934,120	+				-0.0
2,934,132	+				+0.7
2,934,161	-				-0.6
2,934,178	+				+0.3
2,934,219	-				+2.6
2,934,233	+				+0.6
2,934,246	+				+0.7
2,934,265	+				-0.2
2,934,273	-				+1.2
2,934,273	-				+0.0
2,934,273	-				+0.0
2,934,280	+				+1.5
2,934,288	-				-0.2
2,934,293	+				+1.3
2,934,293	+				+2.1
2,934,293	+				-0.5
2,934,293	+				-0.1
2,934,326	+		CCNA_02775	0.23	-1.1
2,934,344	-		CCNA_02775	0.32	+2.1
2,934,372	+		CCNA_02775	0.47	+0.3
2,934,372	+		CCNA_02775	0.47	+1.5
2,934,373	+		CCNA_02775	0.47	+1.0
2,934,385	+		CCNA_02775	0.54	+1.0
2,934,385	+		CCNA_02775	0.54	-0.1
2,934,385	+		CCNA_02775	0.54	-0.5
2,934,397	+		CCNA_02775	0.60	+2.4
2,934,416	+		CCNA_02775	0.70	+3.3
2,934,416	+		CCNA_02775	0.70	+3.9
2,934,416	+		CCNA_02775	0.70	+4.0
2,934,420	+		CCNA_02775	0.72	+1.4
2,934,424	-		CCNA_02775	0.74	+0.8
2,934,424	-		CCNA_02775	0.74	-0.5
2,934,429	-		CCNA_02775	0.77	+0.4
2,934,431	+		CCNA_02775	0.78	-0.2
2,934,465	+				-0.3
2,934,484	+				+1.3
2,934,487	-				-1.2
2,934,487	-				-1.4
2,934,492	+				+1.0
2,934,492	-				-0.6
2,934,492	-				+0.0
2,934,499	+				-0.1
2,934,499	+				-0.8
2,934,499	+				+2.6
2,934,499	+				+0.5
2,934,499	+				+0.1
2,934,507	-				+2.4
2,934,511	+				-0.2
2,934,511	+				-0.0
2,934,519	-				+0.7
2,934,519	-				-1.1
2,934,565	+				+2.7
2,934,578	-				+1.0
2,934,578	-				-0.3
2,934,595	+				+0.4
2,934,595	+				-0.2
2,934,600	+				-0.5
2,934,603	-				+5.1
2,934,603	-				+0.0
2,934,610	+				+2.4
2,934,619	-				-0.9
2,934,623	+				-2.1
2,934,631	-				-0.3
2,934,664	-				+0.1
2,934,669	+				+0.3
2,934,673	+				+0.2
2,934,681	+				-0.7
2,934,681	-				+2.7
2,934,695	+				-0.9
2,934,695	+				-0.9
2,934,703	-				+2.5
2,934,715	-				+1.4
2,934,759	+		CCNA_02776	0.13	-1.8
2,934,789	-		CCNA_02776	0.15	-0.2
2,934,802	-		CCNA_02776	0.16	-0.9
2,934,820	-		CCNA_02776	0.17	+0.3
2,934,831	+		CCNA_02776	0.18	+0.1
2,934,840	-		CCNA_02776	0.18	-1.5
2,934,920	-		CCNA_02776	0.24	+3.1
2,934,933	-		CCNA_02776	0.25	-0.4
2,934,949	+		CCNA_02776	0.26	-0.3
2,934,949	+		CCNA_02776	0.26	-0.5
2,934,949	+		CCNA_02776	0.26	-0.9
2,934,949	+		CCNA_02776	0.26	-0.3
2,934,949	+		CCNA_02776	0.26	-0.4
2,934,949	+		CCNA_02776	0.26	+1.2
2,934,949	+		CCNA_02776	0.26	-0.7
2,934,957	-		CCNA_02776	0.26	-1.1
2,934,957	-		CCNA_02776	0.26	+0.7
2,934,957	-		CCNA_02776	0.26	-0.5
2,934,957	-		CCNA_02776	0.26	+2.0
2,934,957	-		CCNA_02776	0.26	+1.3
2,934,987	-		CCNA_02776	0.29	-1.2
2,935,091	-		CCNA_02776	0.36	-1.8
2,935,091	-		CCNA_02776	0.36	+1.1