Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02767

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,926,184	+				-1.6
2,926,184	+				+1.0
2,926,187	-				+0.7
2,926,189	+				+1.8
2,926,192	-				+1.4
2,926,197	-				-0.8
2,926,197	-				-0.1
2,926,207	-				+1.5
2,926,213	+				+0.5
2,926,221	-				+0.7
2,926,221	-				+0.5
2,926,221	-				-0.4
2,926,221	-				+0.6
2,926,221	-				-1.3
2,926,221	-				+0.6
2,926,226	-				+1.8
2,926,248	-		CCNA_02764	0.14	-0.6
2,926,257	-		CCNA_02764	0.17	+1.3
2,926,257	-		CCNA_02764	0.17	+1.0
2,926,291	-		CCNA_02764	0.32	-1.0
2,926,291	-		CCNA_02764	0.32	+1.8
2,926,318	+		CCNA_02764	0.43	+0.1
2,926,323	+		CCNA_02764	0.45	-0.0
2,926,351	+				+5.6
2,926,361	+		CCNA_02764	0.61	+1.7
2,926,379	+		CCNA_02764	0.68	+1.2
2,926,379	+		CCNA_02764	0.68	-0.4
2,926,379	+		CCNA_02764	0.68	-0.0
2,926,379	+		CCNA_02764	0.68	+0.1
2,926,379	+		CCNA_02764	0.68	-0.1
2,926,379	+		CCNA_02764	0.68	+1.3
2,926,379	+		CCNA_02764	0.68	+1.0
2,926,379	+		CCNA_02764	0.68	-0.9
2,926,379	+		CCNA_02764	0.68	+0.3
2,926,387	-		CCNA_02764	0.72	+0.5
2,926,387	-		CCNA_02764	0.72	+1.2
2,926,387	-		CCNA_02764	0.72	+0.6
2,926,387	-		CCNA_02764	0.72	-1.1
2,926,466	+				+0.4
2,926,466	-				+0.3
2,926,497	+				+1.0
2,926,503	+				+1.3
2,926,511	-				-1.0
2,926,511	-				+0.1
2,926,511	-				+0.2
2,926,548	+		CCNA_02765	0.11	+1.1
2,926,569	-		CCNA_02765	0.16	-1.6
2,926,616	-		CCNA_02765	0.29	-0.0
2,926,638	-		CCNA_02765	0.34	-0.3
2,926,638	-		CCNA_02765	0.34	+2.1
2,926,658	+		CCNA_02765	0.40	+2.0
2,926,659	+		CCNA_02765	0.40	+1.3
2,926,667	-		CCNA_02765	0.42	-0.4
2,926,667	-		CCNA_02765	0.42	-0.3
2,926,719	-		CCNA_02765	0.55	+1.2
2,926,794	+		CCNA_02765	0.75	+0.6
2,926,807	+		CCNA_02765	0.78	+1.5
2,926,810	-		CCNA_02765	0.79	+0.9
2,926,831	+		CCNA_02765	0.85	+1.5
2,926,854	-				+0.2
2,926,866	-				-1.1
2,926,867	-				+2.1
2,926,890	+				+0.8
2,926,890	+				-0.6
2,926,906	+				-0.5
2,926,906	+				+1.1
2,926,906	+				+3.7
2,926,906	+				+0.3
2,926,906	+				-0.9
2,926,906	+				+1.5
2,926,906	+				+0.6
2,926,919	-		CCNA_02766	0.12	-1.1
2,926,929	-		CCNA_02766	0.15	+1.7
2,926,929	-		CCNA_02766	0.15	+2.9
2,926,936	-		CCNA_02766	0.18	+1.3
2,926,945	+		CCNA_02766	0.21	+0.9
2,926,976	-		CCNA_02766	0.32	+0.8
2,926,997	-		CCNA_02766	0.40	-1.0
2,927,041	-		CCNA_02766	0.56	-0.2
2,927,041	-		CCNA_02766	0.56	+2.3
2,927,046	-		CCNA_02766	0.57	+1.2
2,927,070	+		CCNA_02766	0.66	+0.8
2,927,092	-		CCNA_02766	0.74	-0.5
2,927,156	-				+1.7
2,927,157	-				-1.0
2,927,173	+				+1.7
2,927,173	+				-0.5
2,927,181	-				-1.0
2,927,181	-				+1.8
2,927,184	-				-0.1
2,927,209	-				-0.7
2,927,239	-				-0.8
2,927,239	-				+1.9
2,927,249	-				+1.0
2,927,261	-				-0.1
2,927,296	+				+2.1
2,927,338	+		CCNA_02767	0.13	+3.2
2,927,363	+		CCNA_02767	0.15	-1.4
2,927,365	+		CCNA_02767	0.15	+1.2
2,927,382	+		CCNA_02767	0.16	-0.5
2,927,390	-		CCNA_02767	0.17	+1.9
2,927,390	-		CCNA_02767	0.17	+0.0
2,927,390	-		CCNA_02767	0.17	-0.5
2,927,393	+		CCNA_02767	0.17	+2.1
2,927,393	+		CCNA_02767	0.17	+1.0
2,927,394	-		CCNA_02767	0.17	+1.2
2,927,400	-		CCNA_02767	0.18	-0.3
2,927,401	-		CCNA_02767	0.18	+4.0
2,927,401	-		CCNA_02767	0.18	+3.7
2,927,401	-		CCNA_02767	0.18	+3.1
2,927,402	+		CCNA_02767	0.18	-0.1
2,927,408	+		CCNA_02767	0.18	+1.1
2,927,408	+		CCNA_02767	0.18	+2.1
2,927,408	+		CCNA_02767	0.18	-1.2
2,927,416	-		CCNA_02767	0.19	+1.6
2,927,416	-		CCNA_02767	0.19	+0.3
2,927,416	-		CCNA_02767	0.19	-1.5
2,927,416	-		CCNA_02767	0.19	-0.8
2,927,416	-		CCNA_02767	0.19	-2.0
2,927,418	+		CCNA_02767	0.19	+2.3
2,927,426	-		CCNA_02767	0.20	+1.1
2,927,426	-		CCNA_02767	0.20	-0.3
2,927,426	-		CCNA_02767	0.20	-0.6
2,927,426	-		CCNA_02767	0.20	+0.2
2,927,488	+		CCNA_02767	0.25	-0.7
2,927,504	-		CCNA_02767	0.26	+0.1
2,927,525	-		CCNA_02767	0.28	+0.7
2,927,548	+		CCNA_02767	0.30	+0.2
2,927,553	+		CCNA_02767	0.30	-0.1
2,927,561	-		CCNA_02767	0.31	+0.7
2,927,561	-		CCNA_02767	0.31	+1.0
2,927,568	+		CCNA_02767	0.31	+3.7
2,927,572	+		CCNA_02767	0.32	+1.3
2,927,574	+		CCNA_02767	0.32	+1.2
2,927,589	+		CCNA_02767	0.33	-1.5
2,927,592	-		CCNA_02767	0.33	+1.2
2,927,671	+				+2.1
2,927,676	+		CCNA_02767	0.40	+1.7
2,927,676	+		CCNA_02767	0.40	+0.4
2,927,684	-		CCNA_02767	0.40	+0.0
2,927,684	-		CCNA_02767	0.40	+1.0
2,927,689	-		CCNA_02767	0.41	+1.9
2,927,715	-		CCNA_02767	0.43	+1.0
2,927,715	-		CCNA_02767	0.43	-0.4
2,927,758	+		CCNA_02767	0.46	+2.3
2,927,768	+		CCNA_02767	0.47	+0.6
2,927,768	+		CCNA_02767	0.47	+0.8
2,927,768	+		CCNA_02767	0.47	+1.9
2,927,768	+		CCNA_02767	0.47	-1.3
2,927,776	-		CCNA_02767	0.48	+2.0
2,927,776	-		CCNA_02767	0.48	-0.8
2,927,776	-		CCNA_02767	0.48	+0.7
2,927,776	-		CCNA_02767	0.48	-0.3
2,927,776	-		CCNA_02767	0.48	+0.4
2,927,776	-		CCNA_02767	0.48	+1.4
2,927,818	+		CCNA_02767	0.51	-0.7
2,927,826	-		CCNA_02767	0.52	+1.7
2,927,826	-		CCNA_02767	0.52	+2.7
2,927,887	+		CCNA_02767	0.57	-0.1
2,927,887	+		CCNA_02767	0.57	+0.3
2,927,895	-		CCNA_02767	0.57	-2.4
2,927,895	-		CCNA_02767	0.57	+0.2
2,927,903	-		CCNA_02767	0.58	-0.6
2,927,937	+		CCNA_02767	0.61	+1.2
2,927,937	+		CCNA_02767	0.61	-0.6
2,927,965	+		CCNA_02767	0.63	+4.8
2,928,004	+		CCNA_02767	0.66	+0.7
2,928,012	-		CCNA_02767	0.67	+0.5
2,928,012	-		CCNA_02767	0.67	+0.2
2,928,014	+		CCNA_02767	0.67	+0.9
2,928,014	+		CCNA_02767	0.67	-0.7
2,928,014	+		CCNA_02767	0.67	-0.0
2,928,014	+		CCNA_02767	0.67	-0.3
2,928,014	+		CCNA_02767	0.67	+0.8
2,928,014	+		CCNA_02767	0.67	-0.5
2,928,014	+		CCNA_02767	0.67	-0.3
2,928,022	-		CCNA_02767	0.67	-0.2
2,928,022	-		CCNA_02767	0.67	+0.9
2,928,027	+		CCNA_02767	0.68	-0.2
2,928,027	+		CCNA_02767	0.68	-0.6
2,928,027	+		CCNA_02767	0.68	-0.6
2,928,027	+		CCNA_02767	0.68	-1.1
2,928,027	+		CCNA_02767	0.68	-0.3
2,928,027	+		CCNA_02767	0.68	-0.8
2,928,027	+		CCNA_02767	0.68	+0.6
2,928,027	+		CCNA_02767	0.68	+3.1
2,928,027	+		CCNA_02767	0.68	+0.1
2,928,027	+		CCNA_02767	0.68	-0.7
2,928,027	+		CCNA_02767	0.68	-0.4
2,928,027	+		CCNA_02767	0.68	+0.7
2,928,027	+		CCNA_02767	0.68	-1.7
2,928,027	+		CCNA_02767	0.68	-0.1
2,928,035	-		CCNA_02767	0.68	+2.1
2,928,035	-		CCNA_02767	0.68	-1.5
2,928,035	-		CCNA_02767	0.68	+1.2
2,928,035	-		CCNA_02767	0.68	-0.2
2,928,035	-		CCNA_02767	0.68	+0.1
2,928,035	-		CCNA_02767	0.68	-1.7
2,928,035	-		CCNA_02767	0.68	+1.5
2,928,035	-		CCNA_02767	0.68	-1.4
2,928,035	-		CCNA_02767	0.68	+0.8
2,928,035	-		CCNA_02767	0.68	+0.8
2,928,035	-		CCNA_02767	0.68	-0.8
2,928,035	-		CCNA_02767	0.68	-0.5
2,928,035	-		CCNA_02767	0.68	+1.6
2,928,035	-		CCNA_02767	0.68	-0.4
2,928,035	-		CCNA_02767	0.68	+1.3
2,928,064	+		CCNA_02767	0.71	-1.0
2,928,075	+		CCNA_02767	0.72	+1.9
2,928,083	-		CCNA_02767	0.72	+0.4
2,928,090	-		CCNA_02767	0.73	+2.1
2,928,120	+		CCNA_02767	0.75	+1.3
2,928,142	+		CCNA_02767	0.77	+0.9
2,928,142	+		CCNA_02767	0.77	+0.3
2,928,147	+		CCNA_02767	0.77	+0.3
2,928,147	+		CCNA_02767	0.77	-0.8
2,928,150	-		CCNA_02767	0.77	-0.3
2,928,150	-		CCNA_02767	0.77	-1.9
2,928,237	-		CCNA_02767	0.84	+0.5
2,928,247	+		CCNA_02767	0.85	+0.5
2,928,247	+		CCNA_02767	0.85	-0.5
2,928,255	-		CCNA_02767	0.86	+0.2
2,928,255	-		CCNA_02767	0.86	-0.3
2,928,268	+				+3.1
2,928,276	-		CCNA_02767	0.88	-0.1
2,928,325	+				-0.5
2,928,341	+				+1.7
2,928,341	+				+1.1
2,928,342	+				+1.5
2,928,354	+				-0.9
2,928,354	+				+0.1
2,928,354	+				+2.1
2,928,362	-				+0.1
2,928,362	-				-1.1
2,928,396	-				+0.2
2,928,442	+				-0.2
2,928,488	-				-0.5
2,928,496	+				-0.6
2,928,496	+				+1.4
2,928,562	-		CCNA_02768	0.14	+0.3
2,928,580	-		CCNA_02768	0.15	-0.0
2,928,610	+		CCNA_02768	0.18	+0.0
2,928,610	+		CCNA_02768	0.18	+0.6
2,928,618	-		CCNA_02768	0.19	-0.3
2,928,620	+		CCNA_02768	0.19	+1.5
2,928,628	-		CCNA_02768	0.20	+1.1
2,928,643	+		CCNA_02768	0.22	+0.8
2,928,646	-		CCNA_02768	0.22	+1.4
2,928,650	+		CCNA_02768	0.22	+2.1
2,928,795	-		CCNA_02768	0.37	-1.2
2,928,801	-		CCNA_02768	0.38	-0.1
2,928,817	+		CCNA_02768	0.39	+0.9
2,928,825	-		CCNA_02768	0.40	+0.4
2,928,832	+		CCNA_02768	0.41	+1.5
2,928,845	+		CCNA_02768	0.42	-0.9
2,928,855	+		CCNA_02768	0.43	+1.4
2,928,858	-		CCNA_02768	0.44	+0.1
2,928,858	-				+2.1
2,928,881	+		CCNA_02768	0.46	-1.3
2,928,897	-		CCNA_02768	0.48	+1.1
2,928,911	+		CCNA_02768	0.49	+0.1
2,928,919	-		CCNA_02768	0.50	-0.6
2,928,933	-		CCNA_02768	0.51	+1.1
2,928,946	+		CCNA_02768	0.53	+0.9
2,928,946	+		CCNA_02768	0.53	+2.7
2,928,946	+		CCNA_02768	0.53	-1.0
2,928,946	+		CCNA_02768	0.53	+0.1
2,928,951	+		CCNA_02768	0.53	-0.8
2,928,954	-		CCNA_02768	0.53	+0.2
2,928,954	-		CCNA_02768	0.53	+0.1
2,928,954	-		CCNA_02768	0.53	+1.9
2,928,956	+		CCNA_02768	0.54	+0.7
2,928,956	+		CCNA_02768	0.54	+1.9
2,928,964	+		CCNA_02768	0.54	-1.4
2,928,972	-		CCNA_02768	0.55	-0.2
2,929,003	-		CCNA_02768	0.58	-0.2
2,929,010	+		CCNA_02768	0.59	-0.2
2,929,042	-		CCNA_02768	0.62	+2.1
2,929,058	-		CCNA_02768	0.64	-1.2
2,929,069	+		CCNA_02768	0.65	-0.2
2,929,069	+		CCNA_02768	0.65	+2.4
2,929,069	+		CCNA_02768	0.65	-0.2
2,929,069	+		CCNA_02768	0.65	+1.4
2,929,069	+		CCNA_02768	0.65	-0.2
2,929,069	+		CCNA_02768	0.65	+1.0
2,929,069	+		CCNA_02768	0.65	+0.5
2,929,069	+		CCNA_02768	0.65	+0.8
2,929,069	+		CCNA_02768	0.65	+0.5
2,929,069	+		CCNA_02768	0.65	+0.7
2,929,069	+		CCNA_02768	0.65	+2.4
2,929,069	+		CCNA_02768	0.65	+1.2
2,929,077	-		CCNA_02768	0.66	+0.2
2,929,077	-		CCNA_02768	0.66	-0.3
2,929,077	-		CCNA_02768	0.66	+0.9
2,929,077	-		CCNA_02768	0.66	+0.7
2,929,077	-		CCNA_02768	0.66	-1.0
2,929,077	-		CCNA_02768	0.66	+1.7
2,929,077	-		CCNA_02768	0.66	-1.1
2,929,077	-		CCNA_02768	0.66	-1.3
2,929,077	-		CCNA_02768	0.66	+1.0
2,929,090	+		CCNA_02768	0.67	-0.6
2,929,115	-		CCNA_02768	0.70	+0.8
2,929,117	+		CCNA_02768	0.70	-1.0
2,929,117	+		CCNA_02768	0.70	+0.4
2,929,117	+		CCNA_02768	0.70	+0.7
2,929,125	-		CCNA_02768	0.71	-1.0
2,929,141	+		CCNA_02768	0.72	+0.4
2,929,195	+		CCNA_02768	0.78	+1.2
2,929,195	+		CCNA_02768	0.78	-0.5
2,929,195	+		CCNA_02768	0.78	+1.2
2,929,203	-		CCNA_02768	0.79	+1.0
2,929,203	-		CCNA_02768	0.79	-0.6
2,929,203	-		CCNA_02768	0.79	-0.6
2,929,215	-		CCNA_02768	0.80	+0.0
2,929,316	-				+0.1
2,929,316	-				+0.4
2,929,329	-				-1.1
2,929,355	-				+1.1
2,929,415	-				+1.4