Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02745

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,906,553	-		CCNA_02744	0.12	+0.8
2,906,632	-		CCNA_02744	0.23	+0.8
2,906,638	+		CCNA_02744	0.24	+0.5
2,906,638	+		CCNA_02744	0.24	+0.4
2,906,638	+				+2.5
2,906,646	-		CCNA_02744	0.25	-1.2
2,906,646	-		CCNA_02744	0.25	+0.8
2,906,672	+		CCNA_02744	0.29	+2.2
2,906,706	+		CCNA_02744	0.33	-0.1
2,906,751	-		CCNA_02744	0.40	-0.5
2,906,768	-		CCNA_02744	0.42	+0.2
2,906,790	+		CCNA_02744	0.45	+0.3
2,906,826	+				+2.0
2,906,836	-		CCNA_02744	0.52	+1.5
2,906,836	-		CCNA_02744	0.52	+0.1
2,906,836	-		CCNA_02744	0.52	+2.2
2,906,836	-		CCNA_02744	0.52	-0.2
2,906,861	+		CCNA_02744	0.55	-0.6
2,906,861	+		CCNA_02744	0.55	-0.7
2,906,861	+		CCNA_02744	0.55	-0.9
2,906,869	-		CCNA_02744	0.56	-0.3
2,906,869	-		CCNA_02744	0.56	+0.2
2,906,897	-		CCNA_02744	0.60	+0.6
2,906,905	+		CCNA_02744	0.61	+0.8
2,906,931	+		CCNA_02744	0.65	+0.3
2,906,934	-		CCNA_02744	0.65	+2.1
2,906,976	+		CCNA_02744	0.71	+0.2
2,906,976	+		CCNA_02744	0.71	+1.2
2,906,976	+		CCNA_02744	0.71	+0.7
2,906,984	-		CCNA_02744	0.72	+0.5
2,906,984	-		CCNA_02744	0.72	+0.3
2,906,984	-		CCNA_02744	0.72	+1.1
2,906,984	-		CCNA_02744	0.72	+0.5
2,906,984	-		CCNA_02744	0.72	+1.0
2,907,017	-		CCNA_02744	0.77	+1.8
2,907,020	+		CCNA_02744	0.77	+0.8
2,907,047	+		CCNA_02744	0.81	+0.2
2,907,055	-		CCNA_02744	0.82	+0.1
2,907,058	+		CCNA_02744	0.83	+2.1
2,907,077	+		CCNA_02744	0.85	+2.0
2,907,180	-				+1.0
2,907,216	-				+0.5
2,907,280	-				+1.0
2,907,301	+				-1.6
2,907,306	+				-1.7
2,907,311	+				+1.6
2,907,319	-				+0.2
2,907,319	-				+1.2
2,907,377	+				+0.9
2,907,377	+				+1.2
2,907,380	-				+0.0
2,907,385	-				-0.0
2,907,411	-				-1.0
2,907,427	+				-1.3
2,907,435	-				-0.3
2,907,447	+				-0.7
2,907,448	+				-0.6
2,907,448	-				-0.3
2,907,455	-				-0.2
2,907,482	-				-0.5
2,907,487	+				+1.1
2,907,523	+				-1.3
2,907,523	+				-1.6
2,907,531	-				+4.0
2,907,613	+		CCNA_02745	0.11	+2.2
2,907,701	-		CCNA_02745	0.25	+0.3
2,907,728	-		CCNA_02745	0.29	-0.8
2,907,743	-		CCNA_02745	0.31	-0.0
2,907,780	-		CCNA_02745	0.37	+1.5
2,907,780	-		CCNA_02745	0.37	+1.7
2,907,803	-		CCNA_02745	0.41	-0.6
2,907,839	+		CCNA_02745	0.46	-0.0
2,907,860	+		CCNA_02745	0.50	+0.6
2,907,862	+		CCNA_02745	0.50	+4.3
2,907,862	+		CCNA_02745	0.50	+1.2
2,907,868	-		CCNA_02745	0.51	+1.1
2,907,917	-		CCNA_02745	0.58	-0.3
2,907,918	-		CCNA_02745	0.59	+0.2
2,907,962	+		CCNA_02745	0.65	+1.4
2,907,983	-		CCNA_02745	0.69	+2.0
2,908,178	+				-1.1
2,908,305	-				-1.4
2,908,328	-				-0.8
2,908,335	+				+4.0
2,908,344	+				-0.9
2,908,351	-				-0.2
2,908,351	-				-0.1
2,908,443	+		CCNA_02746	0.18	-0.3
2,908,479	-		CCNA_02746	0.22	+0.8
2,908,480	+		CCNA_02746	0.22	+1.4
2,908,483	-		CCNA_02746	0.22	+0.3
2,908,488	-		CCNA_02746	0.23	-0.6
2,908,488	-		CCNA_02746	0.23	+0.7
2,908,501	+		CCNA_02746	0.24	-2.0
2,908,560	+		CCNA_02746	0.30	+3.0
2,908,567	-		CCNA_02746	0.30	-0.4
2,908,568	-		CCNA_02746	0.30	-0.5
2,908,573	+		CCNA_02746	0.31	-0.0
2,908,573	+		CCNA_02746	0.31	-0.4
2,908,573	+				+3.6
2,908,581	-		CCNA_02746	0.32	+1.3
2,908,581	-		CCNA_02746	0.32	-1.7
2,908,627	-		CCNA_02746	0.36	+0.7
2,908,627	-		CCNA_02746	0.36	+1.1
2,908,627	-		CCNA_02746	0.36	+0.8
2,908,627	-		CCNA_02746	0.36	+0.9
2,908,633	+		CCNA_02746	0.37	+0.2
2,908,676	+		CCNA_02746	0.41	-1.3
2,908,676	+		CCNA_02746	0.41	-0.2
2,908,684	-		CCNA_02746	0.42	+1.8
2,908,702	+		CCNA_02746	0.44	-1.0
2,908,710	-		CCNA_02746	0.44	-0.1
2,908,710	-		CCNA_02746	0.44	+3.0
2,908,710	-		CCNA_02746	0.44	-0.3
2,908,721	+		CCNA_02746	0.45	+0.7
2,908,734	+		CCNA_02746	0.47	+0.2
2,908,742	-		CCNA_02746	0.47	+1.4
2,908,754	-		CCNA_02746	0.49	+1.8
2,908,762	+		CCNA_02746	0.49	-0.5
2,908,762	+		CCNA_02746	0.49	+1.3
2,908,762	+		CCNA_02746	0.49	+1.1
2,908,767	+		CCNA_02746	0.50	+0.5
2,908,772	+		CCNA_02746	0.50	+1.1
2,908,780	-		CCNA_02746	0.51	-1.0
2,908,802	-		CCNA_02746	0.53	+1.0
2,908,898	-		CCNA_02746	0.63	+0.4
2,908,947	-		CCNA_02746	0.68	-0.5
2,908,947	-		CCNA_02746	0.68	-0.1
2,908,967	-		CCNA_02746	0.70	-0.8
2,908,969	+		CCNA_02746	0.70	+0.3
2,908,977	-		CCNA_02746	0.71	+1.0
2,908,995	+		CCNA_02746	0.72	+0.9
2,909,003	-		CCNA_02746	0.73	-0.1
2,909,003	-		CCNA_02746	0.73	+0.6
2,909,018	-		CCNA_02746	0.75	-0.1
2,909,025	+		CCNA_02746	0.75	+0.4
2,909,025	+		CCNA_02746	0.75	+0.6
2,909,030	+		CCNA_02746	0.76	+1.0
2,909,081	+		CCNA_02746	0.81	+1.4
2,909,081	+		CCNA_02746	0.81	+1.0
2,909,081	+		CCNA_02746	0.81	-0.7
2,909,089	-		CCNA_02746	0.82	-1.9
2,909,089	-		CCNA_02746	0.82	+1.0
2,909,089	-		CCNA_02746	0.82	-0.2
2,909,091	+		CCNA_02746	0.82	+0.3
2,909,091	-		CCNA_02746	0.82	-0.0
2,909,100	+		CCNA_02746	0.83	+0.1
2,909,123	+		CCNA_02746	0.85	-1.5
2,909,136	+		CCNA_02746	0.86	+1.4
2,909,139	-		CCNA_02746	0.87	+1.0
2,909,144	-		CCNA_02746	0.87	-1.5
2,909,152	+		CCNA_02746	0.88	+0.6
2,909,152	+		CCNA_02746	0.88	-1.5
2,909,152	+		CCNA_02746	0.88	-1.7
2,909,160	-		CCNA_02746	0.89	+0.9
2,909,163	+		CCNA_02746	0.89	-0.5
2,909,163	+		CCNA_02746	0.89	-0.2
2,909,163	+		CCNA_02746	0.89	+0.3