Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02732

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,893,983	+		CCNA_02730	0.72	-0.0
2,893,991	-		CCNA_02730	0.74	-2.1
2,894,017	+		CCNA_02730	0.78	+1.9
2,894,025	-		CCNA_02730	0.79	+0.9
2,894,025	-		CCNA_02730	0.79	+1.2
2,894,025	-		CCNA_02730	0.79	-2.1
2,894,050	+		CCNA_02730	0.83	-2.4
2,894,085	-		CCNA_02730	0.88	-0.3
2,894,087	+		CCNA_02730	0.88	+1.4
2,894,180	+				+2.2
2,894,196	-				+1.8
2,894,252	+		CCNA_02731	0.14	-0.9
2,894,257	+		CCNA_02731	0.14	+1.8
2,894,260	-		CCNA_02731	0.15	-1.2
2,894,303	+		CCNA_02731	0.21	+0.8
2,894,314	-		CCNA_02731	0.23	-1.3
2,894,324	+		CCNA_02731	0.24	-0.7
2,894,324	+		CCNA_02731	0.24	+0.4
2,894,332	-		CCNA_02731	0.25	+0.9
2,894,332	-		CCNA_02731	0.25	+2.2
2,894,332	-		CCNA_02731	0.25	+0.2
2,894,363	+		CCNA_02731	0.30	-0.8
2,894,371	-		CCNA_02731	0.31	+1.0
2,894,373	+		CCNA_02731	0.31	+1.6
2,894,375	+		CCNA_02731	0.31	+2.3
2,894,381	-		CCNA_02731	0.32	+1.1
2,894,381	-		CCNA_02731	0.32	-0.2
2,894,383	-		CCNA_02731	0.33	-0.9
2,894,383	-		CCNA_02731	0.33	-1.1
2,894,430	+		CCNA_02731	0.39	+0.9
2,894,430	+		CCNA_02731	0.39	+1.2
2,894,438	-		CCNA_02731	0.41	+0.4
2,894,467	+		CCNA_02731	0.45	-1.5
2,894,491	-		CCNA_02731	0.48	-0.1
2,894,491	-		CCNA_02731	0.48	+0.1
2,894,528	+		CCNA_02731	0.54	+1.7
2,894,568	+		CCNA_02731	0.59	-0.4
2,894,613	-		CCNA_02731	0.66	+1.2
2,894,629	-		CCNA_02731	0.68	+0.5
2,894,680	+		CCNA_02731	0.76	+1.0
2,894,682	+		CCNA_02731	0.76	-0.3
2,894,729	+		CCNA_02731	0.83	-1.6
2,894,730	-		CCNA_02731	0.83	+0.5
2,894,746	+		CCNA_02731	0.85	+0.8
2,894,765	-		CCNA_02731	0.88	+0.5
2,894,816	-				+2.2
2,894,835	+				+3.0
2,894,843	+				-0.4
2,894,871	-				+2.3
2,894,902	+				-0.3
2,894,910	-				+2.8
2,894,974	-				+5.5
2,895,065	-		CCNA_02732	0.49	+4.5
2,895,077	+		CCNA_02732	0.55	+1.1
2,895,107	-		CCNA_02732	0.70	+5.0
2,895,107	-		CCNA_02732	0.70	+4.7
2,895,203	+				+0.3
2,895,263	-				-0.4
2,895,272	-				+0.4
2,895,272	-				+0.4
2,895,286	-				-0.2
2,895,288	-				+0.1
2,895,288	-				+0.6
2,895,297	-				-1.2
2,895,299	+				+2.3
2,895,307	-				+0.2
2,895,314	+				-0.6
2,895,322	-				-0.3
2,895,342	+				+0.1
2,895,367	+				+0.5
2,895,367	+				+0.6
2,895,367	+				+1.3
2,895,460	-				+1.6
2,895,462	+				-1.1
2,895,467	+				-0.8
2,895,470	-				+0.8
2,895,475	-				+0.6
2,895,475	-				+0.3
2,895,480	-				+0.1
2,895,523	+		CCNA_02733	0.12	-1.2
2,895,531	-		CCNA_02733	0.13	-0.2
2,895,534	+		CCNA_02733	0.13	-1.6
2,895,568	-		CCNA_02733	0.18	+2.1
2,895,577	-		CCNA_02733	0.19	+1.0
2,895,584	+		CCNA_02733	0.20	+0.4
2,895,594	+		CCNA_02733	0.21	-1.1
2,895,626	+		CCNA_02733	0.25	+0.5
2,895,639	+		CCNA_02733	0.27	-0.6
2,895,657	-		CCNA_02733	0.29	+2.5
2,895,670	-		CCNA_02733	0.31	+0.0
2,895,673	+		CCNA_02733	0.31	-0.4
2,895,673	+		CCNA_02733	0.31	+1.9
2,895,717	+		CCNA_02733	0.37	-1.6
2,895,739	-		CCNA_02733	0.39	+1.7
2,895,771	-		CCNA_02733	0.44	+1.5
2,895,803	+		CCNA_02733	0.48	+1.3
2,895,808	+		CCNA_02733	0.48	-0.0
2,895,808	+		CCNA_02733	0.48	+1.4
2,895,808	+		CCNA_02733	0.48	-0.0
2,895,813	+		CCNA_02733	0.49	-0.0
2,895,815	+		CCNA_02733	0.49	+0.1
2,895,816	-		CCNA_02733	0.49	-0.1
2,895,816	-		CCNA_02733	0.49	-0.6
2,895,816	-		CCNA_02733	0.49	+0.9
2,895,816	-		CCNA_02733	0.49	+0.9
2,895,816	-		CCNA_02733	0.49	+0.0
2,895,816	-		CCNA_02733	0.49	+1.0
2,895,823	-		CCNA_02733	0.50	+2.1
2,895,823	-		CCNA_02733	0.50	+1.9
2,895,823	-		CCNA_02733	0.50	+1.5
2,895,841	+		CCNA_02733	0.52	-0.2
2,895,860	-		CCNA_02733	0.55	+1.2
2,895,893	+		CCNA_02733	0.59	+0.7
2,895,893	+		CCNA_02733	0.59	-0.1
2,895,893	+		CCNA_02733	0.59	-0.8
2,895,893	+		CCNA_02733	0.59	+0.4
2,895,893	+		CCNA_02733	0.59	+0.9
2,895,893	+		CCNA_02733	0.59	-0.3
2,895,893	+		CCNA_02733	0.59	-1.5
2,895,893	+		CCNA_02733	0.59	+2.5
2,895,893	+		CCNA_02733	0.59	-1.3
2,895,893	+		CCNA_02733	0.59	+2.2
2,895,893	+		CCNA_02733	0.59	+1.5
2,895,896	-		CCNA_02733	0.60	+0.1
2,895,901	-		CCNA_02733	0.60	-0.6
2,895,901	-		CCNA_02733	0.60	-0.7
2,895,901	-		CCNA_02733	0.60	+2.5
2,895,901	-		CCNA_02733	0.60	+0.7
2,895,901	-		CCNA_02733	0.60	-0.7
2,895,901	-		CCNA_02733	0.60	-0.4
2,895,901	-		CCNA_02733	0.60	+0.2
2,895,901	-		CCNA_02733	0.60	+2.2
2,895,901	-		CCNA_02733	0.60	+0.3
2,895,901	-		CCNA_02733	0.60	+1.1
2,895,901	-		CCNA_02733	0.60	+3.3
2,895,906	-		CCNA_02733	0.61	+0.9
2,895,914	-		CCNA_02733	0.62	+1.8
2,896,021	+		CCNA_02733	0.75	-0.1
2,896,021	+		CCNA_02733	0.75	+0.3
2,896,021	+		CCNA_02733	0.75	-0.9
2,896,026	+		CCNA_02733	0.76	-0.3
2,896,029	-		CCNA_02733	0.77	-0.6
2,896,029	-		CCNA_02733	0.77	+0.4
2,896,042	+		CCNA_02733	0.78	+0.5
2,896,050	-		CCNA_02733	0.79	-0.7
2,896,073	-		CCNA_02733	0.82	+1.1
2,896,074	-		CCNA_02733	0.82	+1.0
2,896,080	+		CCNA_02733	0.83	+0.8
2,896,085	-		CCNA_02733	0.84	-0.2
2,896,097	-		CCNA_02733	0.85	+0.4
2,896,117	-		CCNA_02733	0.88	+0.4