Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02723

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,884,836	+		CCNA_02722	0.12	-1.3
2,884,874	-		CCNA_02722	0.16	+1.9
2,884,880	+		CCNA_02722	0.17	+0.8
2,884,885	+		CCNA_02722	0.17	-0.7
2,884,954	+		CCNA_02722	0.25	-1.1
2,884,959	-		CCNA_02722	0.25	+2.0
2,884,962	-		CCNA_02722	0.25	+1.4
2,884,977	-		CCNA_02722	0.27	+1.2
2,884,979	+		CCNA_02722	0.27	+0.1
2,884,994	-		CCNA_02722	0.29	+1.9
2,885,052	-		CCNA_02722	0.35	+1.1
2,885,099	-		CCNA_02722	0.40	+0.4
2,885,158	-		CCNA_02722	0.47	+1.5
2,885,158	-		CCNA_02722	0.47	+1.9
2,885,158	-		CCNA_02722	0.47	+1.4
2,885,203	+		CCNA_02722	0.51	+1.6
2,885,216	-		CCNA_02722	0.53	+1.3
2,885,225	+		CCNA_02722	0.54	-1.0
2,885,225	+		CCNA_02722	0.54	-0.2
2,885,242	-		CCNA_02722	0.56	+2.0
2,885,260	-		CCNA_02722	0.58	+1.4
2,885,313	-		CCNA_02722	0.63	+1.0
2,885,336	+		CCNA_02722	0.66	+1.1
2,885,348	+		CCNA_02722	0.67	+1.9
2,885,372	+		CCNA_02722	0.70	+1.6
2,885,389	+		CCNA_02722	0.71	-0.8
2,885,454	-		CCNA_02722	0.78	+0.9
2,885,472	-		CCNA_02722	0.80	+1.3
2,885,524	-		CCNA_02722	0.86	+1.5
2,885,547	+		CCNA_02722	0.88	-0.2
2,885,578	+				+1.1
2,885,586	-				+1.8
2,885,586	-				+1.1
2,885,589	-				+1.8
2,885,595	+				-0.2
2,885,618	+				-1.5
2,885,671	+				+4.4
2,885,726	+				+0.0
2,885,734	-				-0.1
2,885,734	-				+0.8
2,885,734	-				+2.0
2,885,750	-				+0.6
2,885,771	+				-0.4
2,885,785	-				+1.2
2,885,899	-		CCNA_02723	0.12	+0.2
2,885,911	+		CCNA_02723	0.15	-0.1
2,885,967	-		CCNA_02723	0.25	-0.8
2,886,000	+		CCNA_02723	0.31	-0.9
2,886,029	-		CCNA_02723	0.36	+2.1
2,886,059	+		CCNA_02723	0.42	-0.0
2,886,067	-		CCNA_02723	0.43	+0.0
2,886,080	-		CCNA_02723	0.46	-0.5
2,886,090	+		CCNA_02723	0.47	+0.4
2,886,098	-		CCNA_02723	0.49	+0.8
2,886,120	-				+1.8
2,886,125	-		CCNA_02723	0.54	-0.3
2,886,140	-		CCNA_02723	0.57	+1.4
2,886,168	+		CCNA_02723	0.62	-0.4
2,886,176	-		CCNA_02723	0.63	+1.5
2,886,190	+		CCNA_02723	0.66	-0.6
2,886,190	+		CCNA_02723	0.66	-0.6
2,886,220	+		CCNA_02723	0.71	-0.1
2,886,220	+		CCNA_02723	0.71	-1.9
2,886,228	+		CCNA_02723	0.73	-0.3
2,886,228	-		CCNA_02723	0.73	-1.4
2,886,228	-		CCNA_02723	0.73	+0.5
2,886,236	-		CCNA_02723	0.74	+0.8
2,886,284	-		CCNA_02723	0.83	-1.1
2,886,290	-		CCNA_02723	0.84	+0.8
2,886,320	+		CCNA_02723	0.90	+2.0
2,886,338	-				-1.6
2,886,351	+				+0.4
2,886,351	+				-0.0
2,886,351	+				+0.6
2,886,361	-				+0.1
2,886,379	-				-0.6
2,886,383	+				+0.9
2,886,398	+				-0.8
2,886,398	+				+1.6
2,886,406	-				+1.9
2,886,406	-				+1.7
2,886,425	-				+1.6
2,886,485	+		CCNA_02724	0.12	-0.6
2,886,514	-		CCNA_02724	0.15	+0.2
2,886,514	-		CCNA_02724	0.15	-0.6
2,886,533	-		CCNA_02724	0.17	+1.6
2,886,559	+		CCNA_02724	0.20	+0.2
2,886,567	-		CCNA_02724	0.21	-0.4
2,886,567	-		CCNA_02724	0.21	+1.3
2,886,578	+		CCNA_02724	0.22	-1.4
2,886,621	-		CCNA_02724	0.26	+0.1
2,886,658	-		CCNA_02724	0.30	+0.1
2,886,658	-		CCNA_02724	0.30	-1.1
2,886,692	-		CCNA_02724	0.34	+0.6
2,886,703	+		CCNA_02724	0.35	-1.1
2,886,710	+		CCNA_02724	0.36	-1.3
2,886,716	+		CCNA_02724	0.36	+1.3
2,886,724	-		CCNA_02724	0.37	+1.0
2,886,740	+		CCNA_02724	0.39	+0.4
2,886,740	+		CCNA_02724	0.39	+0.6
2,886,740	+		CCNA_02724	0.39	-0.0
2,886,740	+		CCNA_02724	0.39	+0.2
2,886,740	+		CCNA_02724	0.39	-0.5
2,886,748	-		CCNA_02724	0.40	+1.0
2,886,748	-		CCNA_02724	0.40	+1.1
2,886,748	-		CCNA_02724	0.40	+0.6
2,886,748	-		CCNA_02724	0.40	+1.1
2,886,824	+		CCNA_02724	0.48	+1.1
2,886,827	-		CCNA_02724	0.48	+0.4
2,886,827	-		CCNA_02724	0.48	+0.3
2,886,827	-		CCNA_02724	0.48	+0.8
2,886,830	+		CCNA_02724	0.48	+0.6
2,886,832	+		CCNA_02724	0.49	+1.4
2,886,838	-		CCNA_02724	0.49	-1.0
2,886,874	+		CCNA_02724	0.53	-0.3
2,886,914	+		CCNA_02724	0.57	-0.7
2,886,940	+		CCNA_02724	0.60	-0.1
2,886,943	-		CCNA_02724	0.60	-1.3
2,886,950	+		CCNA_02724	0.61	+1.1
2,886,972	-		CCNA_02724	0.63	-0.7
2,886,974	+		CCNA_02724	0.64	+1.4
2,887,002	-		CCNA_02724	0.67	-0.6
2,887,046	-		CCNA_02724	0.71	+1.4
2,887,060	+		CCNA_02724	0.73	-0.9
2,887,069	-		CCNA_02724	0.74	+1.1
2,887,073	-		CCNA_02724	0.74	-1.3
2,887,073	-		CCNA_02724	0.74	-0.4
2,887,102	-		CCNA_02724	0.77	+0.6
2,887,126	-		CCNA_02724	0.80	-0.4
2,887,126	-		CCNA_02724	0.80	+1.1
2,887,151	-		CCNA_02724	0.82	-0.3
2,887,165	-		CCNA_02724	0.84	-0.7
2,887,172	-		CCNA_02724	0.85	-0.6
2,887,267	+				+0.6
2,887,287	+				-0.3
2,887,287	+				+1.8
2,887,295	-				-1.0
2,887,295	-				+2.3
2,887,314	+				+0.1
2,887,333	-				+1.2
2,887,338	-				+0.3