Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02702

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,856,336	+		CCNA_02701	0.58	+1.6
2,856,336	+		CCNA_02701	0.58	+0.1
2,856,336	+		CCNA_02701	0.58	+1.1
2,856,425	-		CCNA_02701	0.62	+0.9
2,856,523	-		CCNA_02701	0.66	+1.7
2,856,542	-		CCNA_02701	0.67	+0.8
2,856,599	+		CCNA_02701	0.69	-0.1
2,856,627	-		CCNA_02701	0.70	+1.3
2,856,635	-		CCNA_02701	0.71	-0.9
2,856,637	+		CCNA_02701	0.71	-0.3
2,856,637	+		CCNA_02701	0.71	+1.0
2,856,642	+		CCNA_02701	0.71	-1.0
2,856,642	+		CCNA_02701	0.71	-0.8
2,856,645	-		CCNA_02701	0.71	+0.7
2,856,689	-		CCNA_02701	0.73	+2.7
2,856,704	+		CCNA_02701	0.74	-1.9
2,856,704	+				+2.8
2,856,712	-		CCNA_02701	0.74	+1.6
2,856,751	-		CCNA_02701	0.76	+0.1
2,856,756	+		CCNA_02701	0.76	-0.2
2,856,766	+		CCNA_02701	0.76	+1.0
2,856,814	-		CCNA_02701	0.78	+0.8
2,856,872	-		CCNA_02701	0.81	+1.8
2,856,884	+		CCNA_02701	0.81	-0.9
2,856,921	-		CCNA_02701	0.83	+0.6
2,856,989	+		CCNA_02701	0.86	-0.0
2,856,989	+		CCNA_02701	0.86	+1.3
2,856,989	+		CCNA_02701	0.86	-0.7
2,856,997	-		CCNA_02701	0.86	+2.2
2,856,997	-		CCNA_02701	0.86	+3.5
2,856,997	-		CCNA_02701	0.86	+2.9
2,857,096	-				-0.5
2,857,189	-				+0.6
2,857,194	+				-0.8
2,857,219	-				+0.7
2,857,245	+				+1.3
2,857,253	-				-1.7
2,857,258	-				-0.5
2,857,264	-				+0.7
2,857,282	-				+1.7
2,857,287	+				-0.6
2,857,344	+				-2.2
2,857,346	+				+0.8
2,857,372	+				+0.7
2,857,380	-				-0.3
2,857,382	+				+3.7
2,857,404	-				+1.4
2,857,446	-				+1.2
2,857,489	+		CCNA_02702	0.12	-0.8
2,857,489	+		CCNA_02702	0.12	-0.0
2,857,489	+		CCNA_02702	0.12	-1.2
2,857,489	+		CCNA_02702	0.12	+1.1
2,857,497	-		CCNA_02702	0.13	+1.5
2,857,497	-		CCNA_02702	0.13	+2.7
2,857,497	-		CCNA_02702	0.13	+2.0
2,857,497	-		CCNA_02702	0.13	+1.8
2,857,497	-		CCNA_02702	0.13	+2.3
2,857,497	-		CCNA_02702	0.13	+2.7
2,857,503	+		CCNA_02702	0.13	-0.9
2,857,503	+		CCNA_02702	0.13	+0.2
2,857,511	-		CCNA_02702	0.14	+2.1
2,857,562	-		CCNA_02702	0.17	+0.8
2,857,595	-		CCNA_02702	0.19	+0.7
2,857,619	-		CCNA_02702	0.21	+1.8
2,857,624	+		CCNA_02702	0.21	-1.2
2,857,637	-		CCNA_02702	0.22	+2.1
2,857,637	-		CCNA_02702	0.22	+2.3
2,857,650	-		CCNA_02702	0.23	+2.0
2,857,650	-		CCNA_02702	0.23	+0.9
2,857,650	-		CCNA_02702	0.23	+0.9
2,857,652	+		CCNA_02702	0.23	+1.4
2,857,668	-		CCNA_02702	0.24	+0.4
2,857,768	+		CCNA_02702	0.31	+1.4
2,857,846	+		CCNA_02702	0.37	+0.3
2,857,846	+		CCNA_02702	0.37	+1.8
2,857,895	+				+1.8
2,857,900	+		CCNA_02702	0.40	+0.6
2,857,926	-		CCNA_02702	0.42	+1.7
2,857,928	+		CCNA_02702	0.42	+1.4
2,857,936	-		CCNA_02702	0.43	+0.4
2,857,936	-		CCNA_02702	0.43	+0.4
2,857,936	-		CCNA_02702	0.43	+2.1
2,857,948	-		CCNA_02702	0.44	-1.3
2,857,974	-		CCNA_02702	0.46	+2.2
2,857,976	+		CCNA_02702	0.46	+2.8
2,857,976	+		CCNA_02702	0.46	+0.3
2,857,997	-		CCNA_02702	0.47	-0.1
2,858,003	-		CCNA_02702	0.48	+1.4
2,858,006	-		CCNA_02702	0.48	+0.0
2,858,016	-		CCNA_02702	0.48	+1.2
2,858,043	+		CCNA_02702	0.50	+1.3
2,858,081	+		CCNA_02702	0.53	+3.4
2,858,089	-		CCNA_02702	0.53	-0.3
2,858,089	-		CCNA_02702	0.53	+0.9
2,858,089	-		CCNA_02702	0.53	+0.1
2,858,119	+		CCNA_02702	0.56	-0.4
2,858,119	+		CCNA_02702	0.56	+0.3
2,858,148	-		CCNA_02702	0.58	+0.8
2,858,219	-		CCNA_02702	0.62	+2.1
2,858,220	-		CCNA_02702	0.63	-0.3
2,858,230	-		CCNA_02702	0.63	+0.2
2,858,274	-		CCNA_02702	0.66	+1.9
2,858,289	-		CCNA_02702	0.67	-1.0
2,858,290	+		CCNA_02702	0.67	-0.4
2,858,311	-		CCNA_02702	0.69	-0.3
2,858,342	-		CCNA_02702	0.71	+0.9
2,858,370	+		CCNA_02702	0.73	+3.6
2,858,385	+		CCNA_02702	0.74	-0.2
2,858,393	-		CCNA_02702	0.74	+0.1
2,858,393	-		CCNA_02702	0.74	+1.9
2,858,454	+		CCNA_02702	0.79	+2.1
2,858,454	+		CCNA_02702	0.79	+1.6
2,858,462	-		CCNA_02702	0.79	+0.8
2,858,474	-		CCNA_02702	0.80	+2.6
2,858,474	-		CCNA_02702	0.80	+0.4
2,858,485	-		CCNA_02702	0.81	-0.0
2,858,485	-		CCNA_02702	0.81	-0.3
2,858,490	-		CCNA_02702	0.81	-0.3
2,858,547	-		CCNA_02702	0.85	+2.2
2,858,549	-		CCNA_02702	0.85	+0.6
2,858,564	-		CCNA_02702	0.86	+0.3
2,858,601	+		CCNA_02702	0.89	-1.2
2,858,601	+		CCNA_02702	0.89	-0.8
2,858,601	+		CCNA_02702	0.89	+0.5
2,858,601	+		CCNA_02702	0.89	-0.6
2,858,609	-		CCNA_02702	0.89	+1.2
2,858,609	-		CCNA_02702	0.89	+0.4
2,858,609	-		CCNA_02702	0.89	+1.8
2,858,614	-		CCNA_02702	0.90	+1.8
2,858,644	+				+0.1
2,858,648	-				+0.6
2,858,688	-				+1.0
2,858,688	-				+3.0
2,858,688	-				+1.4
2,858,697	+				+1.0
2,858,718	-				+0.6
2,858,726	-				+1.2
2,858,814	+		CCNA_02703	0.15	+1.0
2,858,814	+		CCNA_02703	0.15	+0.1
2,858,822	-		CCNA_02703	0.17	+0.5
2,858,822	-		CCNA_02703	0.17	+0.9
2,858,822	-		CCNA_02703	0.17	+1.8
2,858,833	-		CCNA_02703	0.20	+1.2
2,858,862	+		CCNA_02703	0.29	-1.2
2,858,890	+				+4.4
2,858,898	+		CCNA_02703	0.39	-0.7
2,858,906	+		CCNA_02703	0.41	+0.7
2,858,951	+		CCNA_02703	0.54	+0.5
2,858,953	-		CCNA_02703	0.55	+1.4
2,858,999	-		CCNA_02703	0.68	+2.4
2,859,015	-		CCNA_02703	0.73	-0.2
2,859,080	+				+2.5
2,859,158	+				+0.5
2,859,163	+				-0.7
2,859,196	-				+0.7
2,859,342	+				+0.4
2,859,350	-				-0.6
2,859,428	+				-1.5