Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02622

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,768,600	-				-2.2
2,768,604	+				-0.2
2,768,612	-				-2.0
2,768,621	-				-0.1
2,768,623	+				-0.5
2,768,636	-				-0.6
2,768,636	-				-0.3
2,768,637	+				+1.9
2,768,683	-				-0.3
2,768,688	-				+0.9
2,768,799	+		CCNA_02621	0.21	+0.4
2,768,807	-		CCNA_02621	0.22	-0.5
2,768,827	+		CCNA_02621	0.24	+0.3
2,768,835	-		CCNA_02621	0.25	+1.3
2,768,835	-		CCNA_02621	0.25	-0.8
2,768,836	-		CCNA_02621	0.25	+0.5
2,768,909	-		CCNA_02621	0.33	+1.8
2,768,945	+		CCNA_02621	0.36	-0.2
2,768,950	+		CCNA_02621	0.37	-0.1
2,768,958	-		CCNA_02621	0.38	+0.3
2,768,997	-		CCNA_02621	0.42	-0.2
2,769,014	-		CCNA_02621	0.44	+0.6
2,769,027	+		CCNA_02621	0.45	+0.1
2,769,035	-		CCNA_02621	0.46	-0.7
2,769,063	+		CCNA_02621	0.49	-0.6
2,769,066	-		CCNA_02621	0.49	+1.4
2,769,071	-		CCNA_02621	0.50	-0.4
2,769,107	+		CCNA_02621	0.54	+0.9
2,769,137	+		CCNA_02621	0.57	+2.6
2,769,137	+		CCNA_02621	0.57	-0.7
2,769,137	+		CCNA_02621	0.57	+0.3
2,769,145	-		CCNA_02621	0.58	-0.4
2,769,145	-		CCNA_02621	0.58	+0.0
2,769,145	-		CCNA_02621	0.58	-0.6
2,769,185	-		CCNA_02621	0.62	+0.8
2,769,187	+		CCNA_02621	0.62	+2.8
2,769,195	-		CCNA_02621	0.63	-0.4
2,769,199	+		CCNA_02621	0.64	+0.0
2,769,200	+		CCNA_02621	0.64	+0.4
2,769,221	+		CCNA_02621	0.66	+2.1
2,769,224	-		CCNA_02621	0.66	+0.4
2,769,243	+		CCNA_02621	0.68	+1.3
2,769,251	-		CCNA_02621	0.69	-1.1
2,769,276	-		CCNA_02621	0.72	+0.6
2,769,276	-		CCNA_02621	0.72	+0.3
2,769,278	+		CCNA_02621	0.72	+0.3
2,769,296	+		CCNA_02621	0.74	+0.6
2,769,304	-		CCNA_02621	0.75	+0.1
2,769,321	+		CCNA_02621	0.77	+1.6
2,769,321	+		CCNA_02621	0.77	+1.0
2,769,327	+		CCNA_02621	0.78	+0.7
2,769,327	+		CCNA_02621	0.78	-0.6
2,769,327	+		CCNA_02621	0.78	+0.7
2,769,327	+		CCNA_02621	0.78	+2.3
2,769,329	-		CCNA_02621	0.78	-0.1
2,769,329	-		CCNA_02621	0.78	-0.1
2,769,334	+		CCNA_02621	0.78	+3.7
2,769,334	+		CCNA_02621	0.78	+3.7
2,769,353	+		CCNA_02621	0.80	-0.2
2,769,356	+		CCNA_02621	0.81	-0.1
2,769,388	+		CCNA_02621	0.84	+0.8
2,769,426	+		CCNA_02621	0.88	-0.5
2,769,428	+		CCNA_02621	0.88	-0.2
2,769,443	+				-0.1
2,769,494	+				-0.7
2,769,514	-				-0.2
2,769,535	+				-1.1
2,769,535	+				+1.2
2,769,535	+				+0.1
2,769,542	+				-1.1
2,769,550	-				+1.4
2,769,550	-				+0.9
2,769,587	+				-0.4
2,769,618	-				+2.2
2,769,618	-				+1.8
2,769,635	-				+1.5
2,769,665	+				-0.9
2,769,728	-				+1.3
2,769,746	-				+0.4
2,769,774	-				+1.8
2,769,790	-		CCNA_02622	0.10	+2.0
2,769,790	-		CCNA_02622	0.10	+1.1
2,769,790	-		CCNA_02622	0.10	+1.5
2,769,882	+		CCNA_02622	0.15	+1.3
2,769,891	+		CCNA_02622	0.16	-1.0
2,769,899	-		CCNA_02622	0.16	+1.2
2,769,915	-		CCNA_02622	0.17	+1.2
2,769,936	-		CCNA_02622	0.18	+0.9
2,769,955	+		CCNA_02622	0.19	+0.9
2,769,955	+		CCNA_02622	0.19	-0.8
2,769,986	+		CCNA_02622	0.21	+1.0
2,769,986	+		CCNA_02622	0.21	-0.6
2,769,986	+		CCNA_02622	0.21	+0.3
2,769,994	-		CCNA_02622	0.21	-0.3
2,769,994	-		CCNA_02622	0.21	+0.1
2,769,994	-		CCNA_02622	0.21	+1.9
2,769,994	-		CCNA_02622	0.21	+0.0
2,770,028	-		CCNA_02622	0.23	+1.6
2,770,037	+		CCNA_02622	0.24	-0.2
2,770,065	+		CCNA_02622	0.25	+1.1
2,770,071	+		CCNA_02622	0.25	+0.0
2,770,081	+		CCNA_02622	0.26	+1.8
2,770,087	+		CCNA_02622	0.26	+2.3
2,770,087	+		CCNA_02622	0.26	-0.9
2,770,095	-		CCNA_02622	0.27	+0.6
2,770,095	-		CCNA_02622	0.27	+1.0
2,770,095	-		CCNA_02622	0.27	+1.3
2,770,095	-		CCNA_02622	0.27	+2.1
2,770,110	-		CCNA_02622	0.27	+1.9
2,770,110	-		CCNA_02622	0.27	+1.2
2,770,117	+		CCNA_02622	0.28	-0.6
2,770,128	-		CCNA_02622	0.28	+1.0
2,770,128	-		CCNA_02622	0.28	+0.7
2,770,220	-		CCNA_02622	0.33	+1.0
2,770,238	+		CCNA_02622	0.34	-0.7
2,770,245	-		CCNA_02622	0.35	-0.7
2,770,263	-		CCNA_02622	0.36	-0.5
2,770,273	+		CCNA_02622	0.36	-0.4
2,770,316	+		CCNA_02622	0.39	+0.3
2,770,344	-		CCNA_02622	0.40	+0.1
2,770,344	-		CCNA_02622	0.40	+2.2
2,770,346	+		CCNA_02622	0.40	+0.8
2,770,361	-		CCNA_02622	0.41	-0.4
2,770,428	+		CCNA_02622	0.45	+0.5
2,770,466	-		CCNA_02622	0.47	+1.5
2,770,473	+		CCNA_02622	0.47	-1.2
2,770,473	+		CCNA_02622	0.47	-0.9
2,770,486	+		CCNA_02622	0.48	-0.7
2,770,486	+		CCNA_02622	0.48	-1.2
2,770,494	-		CCNA_02622	0.48	+0.4
2,770,501	+		CCNA_02622	0.49	+1.6
2,770,559	+		CCNA_02622	0.52	-0.3
2,770,559	+		CCNA_02622	0.52	+0.5
2,770,559	+				+3.3
2,770,570	+		CCNA_02622	0.52	+1.6
2,770,581	-		CCNA_02622	0.53	+1.4
2,770,602	-		CCNA_02622	0.54	+1.6
2,770,606	+		CCNA_02622	0.54	+0.8
2,770,649	-		CCNA_02622	0.56	+1.6
2,770,658	-		CCNA_02622	0.57	-0.4
2,770,694	-		CCNA_02622	0.59	+1.3
2,770,705	+		CCNA_02622	0.60	-0.4
2,770,723	-		CCNA_02622	0.60	+0.5
2,770,744	-		CCNA_02622	0.62	+1.3
2,770,744	-		CCNA_02622	0.62	+0.4
2,770,778	-		CCNA_02622	0.63	+1.1
2,770,805	+		CCNA_02622	0.65	+1.5
2,770,819	+		CCNA_02622	0.66	-2.1
2,770,819	+		CCNA_02622	0.66	-0.2
2,770,819	+		CCNA_02622	0.66	+0.6
2,770,827	-		CCNA_02622	0.66	-0.1
2,770,827	-		CCNA_02622	0.66	+3.0
2,770,827	-		CCNA_02622	0.66	-0.7
2,770,827	-		CCNA_02622	0.66	+1.0
2,770,827	-		CCNA_02622	0.66	+1.0
2,770,827	-		CCNA_02622	0.66	+0.3
2,770,827	-		CCNA_02622	0.66	-0.6
2,770,840	+		CCNA_02622	0.67	+0.9
2,770,844	+		CCNA_02622	0.67	+1.0
2,770,867	+		CCNA_02622	0.68	-0.3
2,770,875	-		CCNA_02622	0.69	+1.8
2,770,875	-		CCNA_02622	0.69	+0.8
2,770,885	-		CCNA_02622	0.69	+2.5
2,770,904	-		CCNA_02622	0.70	+0.3
2,770,921	+		CCNA_02622	0.71	-0.8
2,770,976	-		CCNA_02622	0.74	-1.2
2,770,976	-		CCNA_02622	0.74	+0.9
2,771,036	-		CCNA_02622	0.77	-0.7
2,771,046	+		CCNA_02622	0.78	-0.1
2,771,046	+		CCNA_02622	0.78	+2.0
2,771,046	+		CCNA_02622	0.78	+1.1
2,771,046	+		CCNA_02622	0.78	+0.8
2,771,046	+		CCNA_02622	0.78	+1.6
2,771,054	-		CCNA_02622	0.78	+0.1
2,771,054	-		CCNA_02622	0.78	+1.6
2,771,054	-		CCNA_02622	0.78	-0.5
2,771,054	-		CCNA_02622	0.78	+1.4
2,771,054	-		CCNA_02622	0.78	+0.3
2,771,068	-		CCNA_02622	0.79	+0.6
2,771,101	+		CCNA_02622	0.81	-0.8
2,771,101	+		CCNA_02622	0.81	+0.3
2,771,108	+		CCNA_02622	0.81	-1.0
2,771,108	+		CCNA_02622	0.81	+1.0
2,771,108	+		CCNA_02622	0.81	+1.4
2,771,108	+		CCNA_02622	0.81	-1.1
2,771,108	+		CCNA_02622	0.81	-1.0
2,771,108	+		CCNA_02622	0.81	-1.1
2,771,108	+		CCNA_02622	0.81	+1.1
2,771,108	+		CCNA_02622	0.81	+1.4
2,771,108	+		CCNA_02622	0.81	-0.9
2,771,113	+		CCNA_02622	0.81	-0.7
2,771,116	-		CCNA_02622	0.82	-0.4
2,771,116	-		CCNA_02622	0.82	+0.9
2,771,116	-		CCNA_02622	0.82	-0.5
2,771,116	-		CCNA_02622	0.82	-1.5
2,771,116	-		CCNA_02622	0.82	-1.6
2,771,116	-		CCNA_02622	0.82	-1.3
2,771,127	-		CCNA_02622	0.82	+0.8
2,771,154	+		CCNA_02622	0.84	+0.2
2,771,154	+		CCNA_02622	0.84	-0.8
2,771,162	-		CCNA_02622	0.84	+1.4
2,771,206	+		CCNA_02622	0.86	+3.2
2,771,213	+		CCNA_02622	0.87	+0.8
2,771,243	-		CCNA_02622	0.88	+2.3
2,771,243	-		CCNA_02622	0.88	+1.6
2,771,243	-		CCNA_02622	0.88	+0.3
2,771,253	-		CCNA_02622	0.89	+0.8
2,771,265	-		CCNA_02622	0.90	+1.3
2,771,292	+				+1.0
2,771,292	+				-2.3
2,771,292	+				+1.2
2,771,292	+				+1.2
2,771,298	-				+1.0
2,771,298	-				+2.3
2,771,319	+				-1.2
2,771,327	-				-0.4
2,771,327	-				+0.9
2,771,364	-				+1.0
2,771,364	-				+1.6
2,771,369	-				+1.8
2,771,505	+				+1.0