Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02564

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,711,036	+		CCNA_02563	0.21	-0.2
2,711,044	-		CCNA_02563	0.22	+0.8
2,711,081	-		CCNA_02563	0.25	+0.7
2,711,118	+		CCNA_02563	0.28	+0.6
2,711,118	+		CCNA_02563	0.28	-0.2
2,711,119	+		CCNA_02563	0.28	+1.4
2,711,119	-		CCNA_02563	0.28	+0.2
2,711,236	-		CCNA_02563	0.37	-2.3
2,711,298	+		CCNA_02563	0.42	-1.8
2,711,343	+		CCNA_02563	0.46	-0.6
2,711,346	+		CCNA_02563	0.46	+1.2
2,711,364	-		CCNA_02563	0.48	+0.1
2,711,413	+		CCNA_02563	0.52	-0.3
2,711,424	+		CCNA_02563	0.53	-0.6
2,711,432	-		CCNA_02563	0.53	-0.0
2,711,432	-		CCNA_02563	0.53	+0.1
2,711,435	+		CCNA_02563	0.54	-0.2
2,711,435	+		CCNA_02563	0.54	-1.3
2,711,450	-		CCNA_02563	0.55	-0.4
2,711,453	+		CCNA_02563	0.55	-0.8
2,711,458	+		CCNA_02563	0.56	-1.0
2,711,469	+				+2.4
2,711,474	+		CCNA_02563	0.57	+0.1
2,711,492	+		CCNA_02563	0.58	-0.2
2,711,514	+		CCNA_02563	0.60	+1.6
2,711,521	-		CCNA_02563	0.61	+1.4
2,711,575	-		CCNA_02563	0.65	-0.3
2,711,584	+		CCNA_02563	0.66	-0.6
2,711,584	+		CCNA_02563	0.66	+2.1
2,711,592	-		CCNA_02563	0.67	-1.3
2,711,592	-		CCNA_02563	0.67	-0.3
2,711,592	-		CCNA_02563	0.67	-2.1
2,711,622	-		CCNA_02563	0.69	+0.6
2,711,622	-		CCNA_02563	0.69	-0.2
2,711,637	-		CCNA_02563	0.70	+1.1
2,711,641	+		CCNA_02563	0.71	+0.2
2,711,679	+		CCNA_02563	0.74	-0.5
2,711,684	+		CCNA_02563	0.74	-0.5
2,711,684	+		CCNA_02563	0.74	+0.6
2,711,692	-		CCNA_02563	0.75	+0.1
2,711,700	-		CCNA_02563	0.75	-1.3
2,711,705	-		CCNA_02563	0.76	-1.7
2,711,707	+		CCNA_02563	0.76	-0.8
2,711,715	-		CCNA_02563	0.77	+0.8
2,711,715	-		CCNA_02563	0.77	+2.6
2,711,726	-		CCNA_02563	0.77	+0.6
2,711,745	+		CCNA_02563	0.79	+1.0
2,711,745	+		CCNA_02563	0.79	+0.5
2,711,753	-		CCNA_02563	0.80	-1.0
2,711,753	-		CCNA_02563	0.80	+0.1
2,711,753	-		CCNA_02563	0.80	-0.2
2,711,769	-		CCNA_02563	0.81	-0.8
2,711,828	+		CCNA_02563	0.86	+2.5
2,711,836	-		CCNA_02563	0.86	-0.3
2,711,836	-		CCNA_02563	0.86	-0.1
2,711,838	+		CCNA_02563	0.87	+2.4
2,711,843	+		CCNA_02563	0.87	+0.8
2,711,843	+		CCNA_02563	0.87	-1.2
2,711,846	-		CCNA_02563	0.87	+0.2
2,711,889	-				-0.0
2,711,919	-				-0.9
2,711,943	+				+0.2
2,712,058	+				+0.2
2,712,058	+				-0.4
2,712,066	-				-0.7
2,712,135	+		CCNA_02564	0.11	+0.6
2,712,135	+		CCNA_02564	0.11	-1.2
2,712,143	-		CCNA_02564	0.11	-1.4
2,712,143	-		CCNA_02564	0.11	+0.8
2,712,143	-		CCNA_02564	0.11	-0.6
2,712,144	-		CCNA_02564	0.12	-2.8
2,712,164	-		CCNA_02564	0.13	-1.6
2,712,170	+		CCNA_02564	0.14	-0.3
2,712,191	+		CCNA_02564	0.16	-0.9
2,712,191	-		CCNA_02564	0.16	+1.3
2,712,289	+		CCNA_02564	0.25	+0.3
2,712,325	-		CCNA_02564	0.28	+0.1
2,712,376	-		CCNA_02564	0.32	-0.2
2,712,400	-		CCNA_02564	0.34	+0.4
2,712,439	-		CCNA_02564	0.38	+1.6
2,712,458	-				+3.4
2,712,477	+		CCNA_02564	0.41	-0.5
2,712,501	+		CCNA_02564	0.44	-0.4
2,712,556	-		CCNA_02564	0.48	-0.3
2,712,557	-		CCNA_02564	0.49	+1.0
2,712,566	-		CCNA_02564	0.49	+1.0
2,712,587	+		CCNA_02564	0.51	-0.7
2,712,587	+		CCNA_02564	0.51	-0.2
2,712,598	+		CCNA_02564	0.52	+0.1
2,712,603	+		CCNA_02564	0.53	+0.8
2,712,693	-		CCNA_02564	0.61	+0.9
2,712,711	+		CCNA_02564	0.62	+0.3
2,712,754	-		CCNA_02564	0.66	-0.6
2,712,774	-		CCNA_02564	0.68	+0.5
2,712,815	+		CCNA_02564	0.72	-0.3
2,712,830	-		CCNA_02564	0.73	-0.3
2,712,839	-		CCNA_02564	0.74	+0.6
2,712,846	-		CCNA_02564	0.74	-1.4
2,712,849	+		CCNA_02564	0.75	+0.1
2,712,849	+		CCNA_02564	0.75	+0.4
2,712,857	-		CCNA_02564	0.75	-1.0
2,712,889	+		CCNA_02564	0.78	-0.8
2,712,897	-		CCNA_02564	0.79	+1.7
2,712,897	-		CCNA_02564	0.79	+0.3
2,712,915	+		CCNA_02564	0.81	-0.8
2,712,917	+		CCNA_02564	0.81	+1.1
2,712,917	+		CCNA_02564	0.81	+1.3
2,712,917	+		CCNA_02564	0.81	+0.1
2,712,925	-		CCNA_02564	0.82	-0.3
2,712,927	+		CCNA_02564	0.82	-1.5
2,712,927	+		CCNA_02564	0.82	+1.5
2,712,932	+		CCNA_02564	0.82	-0.6
2,712,935	-		CCNA_02564	0.82	+0.2
2,712,940	-		CCNA_02564	0.83	-0.8
2,712,970	+		CCNA_02564	0.86	+0.7
2,712,978	-		CCNA_02564	0.86	-0.3
2,712,994	+		CCNA_02564	0.88	+2.1
2,712,994	+		CCNA_02564	0.88	-1.4
2,713,001	+		CCNA_02564	0.88	-0.7
2,713,020	-				+0.5
2,713,029	+				-0.7
2,713,037	-				+2.6
2,713,052	-				+0.5
2,713,085	+				+1.4
2,713,145	-				+2.4
2,713,149	+				+0.6
2,713,152	+				+0.6
2,713,160	-				+1.6
2,713,178	+				-0.4
2,713,196	+				+0.3
2,713,251	+				-0.0
2,713,261	-				+1.1
2,713,282	-				-0.7
2,713,282	-				-0.6
2,713,282	-				-0.5
2,713,282	-				+1.0
2,713,304	+				+1.6
2,713,304	+				+2.1
2,713,304	+				+0.5
2,713,325	+				+0.6
2,713,354	-		CCNA_02565	0.15	+0.4
2,713,363	-		CCNA_02565	0.16	+0.0
2,713,363	-		CCNA_02565	0.16	-0.5
2,713,363	-		CCNA_02565	0.16	+1.1
2,713,393	+		CCNA_02565	0.22	+1.6
2,713,394	+		CCNA_02565	0.22	+0.5
2,713,399	+		CCNA_02565	0.23	+0.6
2,713,412	-		CCNA_02565	0.25	+0.5
2,713,412	-		CCNA_02565	0.25	+0.7
2,713,445	+		CCNA_02565	0.31	-0.6
2,713,450	+		CCNA_02565	0.32	+0.2
2,713,453	-		CCNA_02565	0.33	-0.2
2,713,453	-		CCNA_02565	0.33	+1.1
2,713,458	-		CCNA_02565	0.34	+0.5
2,713,515	+		CCNA_02565	0.44	+1.1
2,713,544	-		CCNA_02565	0.49	-1.4
2,713,583	-		CCNA_02565	0.56	+0.7
2,713,591	-		CCNA_02565	0.58	+0.3
2,713,614	+		CCNA_02565	0.62	-0.6
2,713,614	+		CCNA_02565	0.62	+0.4
2,713,644	-		CCNA_02565	0.67	+1.8
2,713,675	+		CCNA_02565	0.73	+0.6
2,713,698	+		CCNA_02565	0.77	+2.4
2,713,706	-		CCNA_02565	0.79	+1.6
2,713,723	-		CCNA_02565	0.82	-0.8
2,713,730	+		CCNA_02565	0.83	+0.5
2,713,741	+		CCNA_02565	0.85	+0.3
2,713,763	+		CCNA_02565	0.89	-0.1
2,713,763	+		CCNA_02565	0.89	-0.0
2,713,763	+		CCNA_02565	0.89	-0.0
2,713,763	+		CCNA_02565	0.89	-0.3
2,713,766	+		CCNA_02565	0.89	-0.5
2,713,771	-				-0.5
2,713,829	+				-0.2
2,713,832	-				-0.8
2,713,837	-				+0.8
2,713,837	-				-0.1
2,713,852	-				+1.3
2,713,894	+				+0.7
2,713,902	-				+0.7
2,713,902	-				+1.0
2,713,924	+				-0.6
2,713,931	+				-0.8
2,713,931	+				+1.5
2,713,931	+				-0.7
2,713,932	-				-0.2
2,713,939	-				-0.1
2,713,939	-				+1.3
2,713,939	-				+0.1
2,713,939	-				-0.3
2,713,987	+				-0.3
2,713,997	-				+1.5
2,714,000	+				-1.2
2,714,025	-				+0.8
2,714,029	+				+0.6
2,714,046	-				+0.7
2,714,077	-				+0.4
2,714,086	+				+0.1
2,714,086	+				-0.1
2,714,086	+				-0.6
2,714,094	-				-0.5
2,714,095	+				+1.4