Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02562

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,707,946	-		CCNA_02561	0.32	+0.6
2,708,020	-		CCNA_02561	0.37	+4.1
2,708,026	-		CCNA_02561	0.38	+0.4
2,708,039	-		CCNA_02561	0.39	+2.0
2,708,216	+		CCNA_02561	0.51	+0.7
2,708,251	-		CCNA_02561	0.53	+2.4
2,708,256	-		CCNA_02561	0.54	+1.7
2,708,256	-		CCNA_02561	0.54	+1.2
2,708,259	+		CCNA_02561	0.54	+0.2
2,708,277	-		CCNA_02561	0.55	+1.2
2,708,364	-		CCNA_02561	0.61	+1.7
2,708,366	+		CCNA_02561	0.62	+0.8
2,708,397	-		CCNA_02561	0.64	+2.2
2,708,406	-		CCNA_02561	0.64	+2.5
2,708,406	-		CCNA_02561	0.64	+3.8
2,708,406	-		CCNA_02561	0.64	+1.9
2,708,435	+		CCNA_02561	0.66	-0.8
2,708,435	+		CCNA_02561	0.66	-0.9
2,708,514	+		CCNA_02561	0.72	+0.2
2,708,522	-		CCNA_02561	0.72	+1.4
2,708,532	+		CCNA_02561	0.73	+0.5
2,708,549	+		CCNA_02561	0.74	-0.0
2,708,550	+		CCNA_02561	0.74	-0.2
2,708,566	+		CCNA_02561	0.76	-0.7
2,708,573	-		CCNA_02561	0.76	+2.0
2,708,587	-		CCNA_02561	0.77	+2.5
2,708,590	-		CCNA_02561	0.77	+1.9
2,708,599	-		CCNA_02561	0.78	+1.2
2,708,606	-		CCNA_02561	0.78	+0.0
2,708,631	-		CCNA_02561	0.80	+2.1
2,708,657	-		CCNA_02561	0.82	+1.5
2,708,657	-		CCNA_02561	0.82	+2.1
2,708,679	+		CCNA_02561	0.84	+0.0
2,708,679	+		CCNA_02561	0.84	+4.4
2,708,679	+		CCNA_02561	0.84	+0.2
2,708,679	+		CCNA_02561	0.84	-0.2
2,708,687	-		CCNA_02561	0.84	+1.5
2,708,687	-		CCNA_02561	0.84	+1.4
2,708,687	-		CCNA_02561	0.84	+1.7
2,708,726	-		CCNA_02561	0.87	+1.2
2,708,731	-		CCNA_02561	0.87	+2.3
2,708,732	-		CCNA_02561	0.87	-0.9
2,708,745	+		CCNA_02561	0.88	-2.8
2,708,747	+		CCNA_02561	0.88	+0.5
2,708,781	+				+1.2
2,708,789	-				+1.4
2,708,789	-				+1.2
2,708,789	-				+1.1
2,708,828	+				+2.4
2,708,859	-				+0.9
2,708,859	-				+2.6
2,708,869	+				-0.1
2,708,877	-				-0.3
2,708,877	-				+1.6
2,708,877	-				+1.4
2,708,877	-				-0.4
2,708,877	-				-0.4
2,708,939	+				+1.4
2,708,954	+				+1.8
2,708,957	-				+0.3
2,708,962	-				+2.6
2,708,962	-				+2.4
2,708,968	-				+2.4
2,708,978	-				+1.2
2,709,000	-				+2.6
2,709,015	-				+0.8
2,709,076	-		CCNA_02562	0.10	+2.0
2,709,103	+		CCNA_02562	0.12	+1.4
2,709,121	+		CCNA_02562	0.13	-1.3
2,709,152	+		CCNA_02562	0.15	-0.3
2,709,160	-		CCNA_02562	0.15	+1.4
2,709,181	+		CCNA_02562	0.17	+0.0
2,709,186	-		CCNA_02562	0.17	+1.6
2,709,189	-		CCNA_02562	0.17	+1.8
2,709,189	-		CCNA_02562	0.17	+1.4
2,709,189	-		CCNA_02562	0.17	+1.7
2,709,196	+		CCNA_02562	0.18	+0.4
2,709,307	+		CCNA_02562	0.25	+0.0
2,709,355	+		CCNA_02562	0.28	+1.4
2,709,363	-		CCNA_02562	0.28	+2.8
2,709,363	-		CCNA_02562	0.28	+2.5
2,709,363	-		CCNA_02562	0.28	+1.7
2,709,363	-		CCNA_02562	0.28	+3.8
2,709,363	-		CCNA_02562	0.28	+1.9
2,709,365	+		CCNA_02562	0.28	-1.6
2,709,365	+		CCNA_02562	0.28	-0.1
2,709,373	-		CCNA_02562	0.29	+1.4
2,709,373	-		CCNA_02562	0.29	+1.7
2,709,373	-		CCNA_02562	0.29	+1.6
2,709,380	-		CCNA_02562	0.29	+2.6
2,709,392	-		CCNA_02562	0.30	+1.1
2,709,398	+		CCNA_02562	0.30	-0.4
2,709,427	+		CCNA_02562	0.32	+0.5
2,709,435	-		CCNA_02562	0.33	+2.1
2,709,436	-		CCNA_02562	0.33	+2.6
2,709,436	-		CCNA_02562	0.33	+2.0
2,709,440	-		CCNA_02562	0.33	+2.6
2,709,483	+		CCNA_02562	0.36	+1.2
2,709,491	-		CCNA_02562	0.36	+2.5
2,709,496	-		CCNA_02562	0.36	+1.2
2,709,592	-		CCNA_02562	0.42	+2.4
2,709,638	+		CCNA_02562	0.45	-1.1
2,709,638	+		CCNA_02562	0.45	+0.2
2,709,640	-		CCNA_02562	0.45	+1.3
2,709,646	-		CCNA_02562	0.46	-0.1
2,709,646	-		CCNA_02562	0.46	+1.4
2,709,646	-		CCNA_02562	0.46	+0.2
2,709,650	+		CCNA_02562	0.46	+1.2
2,709,658	-		CCNA_02562	0.46	+1.9
2,709,658	-		CCNA_02562	0.46	+0.7
2,709,658	-		CCNA_02562	0.46	-0.7
2,709,658	-		CCNA_02562	0.46	+0.4
2,709,722	-		CCNA_02562	0.50	+1.1
2,709,724	+		CCNA_02562	0.51	+1.3
2,709,739	+		CCNA_02562	0.51	+0.0
2,709,747	-		CCNA_02562	0.52	+0.5
2,709,747	-		CCNA_02562	0.52	+0.8
2,709,755	+		CCNA_02562	0.52	+0.9
2,709,761	-		CCNA_02562	0.53	+1.8
2,709,795	+		CCNA_02562	0.55	+0.8
2,709,795	+		CCNA_02562	0.55	+0.8
2,709,795	+		CCNA_02562	0.55	+0.7
2,709,795	+		CCNA_02562	0.55	+1.0
2,709,796	+		CCNA_02562	0.55	+0.1
2,709,796	+		CCNA_02562	0.55	-0.0
2,709,796	+		CCNA_02562	0.55	+3.1
2,709,804	-		CCNA_02562	0.56	+0.7
2,709,820	-		CCNA_02562	0.57	+0.6
2,709,848	+		CCNA_02562	0.58	+3.0
2,709,848	+		CCNA_02562	0.58	-1.6
2,709,856	-		CCNA_02562	0.59	-0.9
2,709,856	-		CCNA_02562	0.59	+0.0
2,709,856	-		CCNA_02562	0.59	-0.7
2,709,859	+		CCNA_02562	0.59	+0.5
2,709,911	+		CCNA_02562	0.62	+0.7
2,709,919	-		CCNA_02562	0.63	+0.0
2,709,951	-		CCNA_02562	0.65	+0.1
2,709,951	-		CCNA_02562	0.65	+0.9
2,709,966	-		CCNA_02562	0.66	+1.5
2,709,966	-		CCNA_02562	0.66	+1.3
2,709,992	+		CCNA_02562	0.67	-0.9
2,709,992	+		CCNA_02562	0.67	+0.4
2,710,022	-		CCNA_02562	0.69	+4.4
2,710,065	-		CCNA_02562	0.72	+0.2
2,710,107	+		CCNA_02562	0.74	+0.5
2,710,139	-		CCNA_02562	0.76	-0.1
2,710,149	+		CCNA_02562	0.77	-0.0
2,710,174	+		CCNA_02562	0.79	+0.1
2,710,204	+		CCNA_02562	0.81	-0.2
2,710,205	+		CCNA_02562	0.81	-0.2
2,710,222	-		CCNA_02562	0.82	+0.9
2,710,223	-		CCNA_02562	0.82	-0.4
2,710,291	-		CCNA_02562	0.86	+2.0
2,710,293	+		CCNA_02562	0.86	-0.1
2,710,294	+		CCNA_02562	0.86	-2.2
2,710,306	-		CCNA_02562	0.87	+1.9
2,710,306	-		CCNA_02562	0.87	-1.3
2,710,339	-		CCNA_02562	0.89	+0.5
2,710,349	+		CCNA_02562	0.90	+2.1
2,710,411	+				-0.3
2,710,416	-				+0.6
2,710,419	-				+1.9
2,710,431	+				-1.3
2,710,439	-				+0.6
2,710,513	+				+0.0
2,710,521	-				+1.3
2,710,543	+				+2.3
2,710,580	-				+3.1
2,710,584	+				-1.1
2,710,586	-				+2.6
2,710,592	-				+1.4
2,710,594	+				-1.5
2,710,594	+				-1.2
2,710,631	+				-1.3
2,710,682	-				+1.7
2,710,705	+				-0.6
2,710,711	-				-1.1
2,710,723	+				-0.0
2,710,749	+				+0.3
2,710,811	+				-1.5
2,710,814	-				+3.1
2,710,840	+				-0.7
2,710,876	-				-0.3
2,710,903	+		CCNA_02563	0.10	-0.8
2,710,911	+		CCNA_02563	0.11	+1.1
2,710,916	+		CCNA_02563	0.11	+0.2
2,710,919	-		CCNA_02563	0.12	+1.1
2,710,929	-		CCNA_02563	0.12	+0.0
2,710,992	-		CCNA_02563	0.17	-0.8
2,711,001	+		CCNA_02563	0.18	+0.8
2,711,036	+		CCNA_02563	0.21	-0.2
2,711,044	-		CCNA_02563	0.22	+0.8
2,711,081	-		CCNA_02563	0.25	+0.7
2,711,118	+		CCNA_02563	0.28	+0.6
2,711,118	+		CCNA_02563	0.28	-0.2
2,711,119	+		CCNA_02563	0.28	+1.4
2,711,119	-		CCNA_02563	0.28	+0.2
2,711,236	-		CCNA_02563	0.37	-2.3
2,711,298	+		CCNA_02563	0.42	-1.8
2,711,343	+		CCNA_02563	0.46	-0.6
2,711,346	+		CCNA_02563	0.46	+1.2
2,711,364	-		CCNA_02563	0.48	+0.1
2,711,413	+		CCNA_02563	0.52	-0.3
2,711,424	+		CCNA_02563	0.53	-0.6
2,711,432	-		CCNA_02563	0.53	-0.0
2,711,432	-		CCNA_02563	0.53	+0.1
2,711,435	+		CCNA_02563	0.54	-0.2
2,711,435	+		CCNA_02563	0.54	-1.3
2,711,450	-		CCNA_02563	0.55	-0.4
2,711,453	+		CCNA_02563	0.55	-0.8
2,711,458	+		CCNA_02563	0.56	-1.0
2,711,469	+				+2.4
2,711,474	+		CCNA_02563	0.57	+0.1
2,711,492	+		CCNA_02563	0.58	-0.2
2,711,514	+		CCNA_02563	0.60	+1.6