Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02547

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,694,976	+		CCNA_02546	0.29	+1.9
2,695,059	-		CCNA_02546	0.35	+1.7
2,695,068	+		CCNA_02546	0.36	+1.2
2,695,083	+		CCNA_02546	0.37	-1.4
2,695,083	+		CCNA_02546	0.37	+0.1
2,695,091	-		CCNA_02546	0.37	+1.7
2,695,100	+		CCNA_02546	0.38	+0.7
2,695,103	-		CCNA_02546	0.38	+0.9
2,695,121	-		CCNA_02546	0.40	+2.2
2,695,129	-		CCNA_02546	0.40	+2.4
2,695,129	-		CCNA_02546	0.40	+2.4
2,695,133	+		CCNA_02546	0.41	+1.7
2,695,133	+		CCNA_02546	0.41	-0.2
2,695,141	-		CCNA_02546	0.41	+2.4
2,695,175	-		CCNA_02546	0.44	+1.8
2,695,250	+		CCNA_02546	0.49	+0.7
2,695,269	+		CCNA_02546	0.50	+1.4
2,695,277	-		CCNA_02546	0.51	+2.2
2,695,312	-		CCNA_02546	0.54	+2.0
2,695,324	+		CCNA_02546	0.55	+2.1
2,695,345	-		CCNA_02546	0.56	+1.7
2,695,345	-		CCNA_02546	0.56	+1.2
2,695,394	-		CCNA_02546	0.60	+1.9
2,695,394	-		CCNA_02546	0.60	+2.2
2,695,397	+		CCNA_02546	0.60	+1.0
2,695,407	-		CCNA_02546	0.61	+1.0
2,695,416	+		CCNA_02546	0.61	+2.4
2,695,422	-		CCNA_02546	0.62	+1.7
2,695,428	+		CCNA_02546	0.62	-0.6
2,695,450	-		CCNA_02546	0.64	+1.6
2,695,455	-		CCNA_02546	0.64	+0.3
2,695,485	+		CCNA_02546	0.66	-0.6
2,695,495	+		CCNA_02546	0.67	+1.4
2,695,503	-		CCNA_02546	0.68	+1.4
2,695,534	-		CCNA_02546	0.70	+2.0
2,695,545	-		CCNA_02546	0.71	+2.8
2,695,558	-		CCNA_02546	0.72	+1.7
2,695,584	+		CCNA_02546	0.74	+2.8
2,695,584	+		CCNA_02546	0.74	+0.6
2,695,592	-		CCNA_02546	0.74	+2.0
2,695,592	-		CCNA_02546	0.74	+2.8
2,695,611	+		CCNA_02546	0.76	+1.6
2,695,617	-		CCNA_02546	0.76	+2.6
2,695,642	-		CCNA_02546	0.78	+1.8
2,695,672	-		CCNA_02546	0.80	+2.5
2,695,697	+		CCNA_02546	0.82	-0.7
2,695,707	-		CCNA_02546	0.83	+1.9
2,695,736	+		CCNA_02546	0.85	+0.0
2,695,751	-		CCNA_02546	0.86	+2.6
2,695,751	-		CCNA_02546	0.86	+0.4
2,695,772	-		CCNA_02546	0.87	+0.7
2,695,809	-				+1.8
2,695,820	+				+1.0
2,695,820	+				-0.4
2,695,820	+				+2.1
2,695,820	+				-0.5
2,695,825	+				-0.8
2,695,825	+				+0.6
2,695,825	+				+0.6
2,695,828	-				+3.3
2,695,828	-				+1.2
2,695,828	-				+2.0
2,695,828	-				+2.2
2,695,828	-				+1.6
2,695,828	-				+2.0
2,695,828	-				+2.3
2,695,868	-				+0.5
2,695,868	-				+1.4
2,695,875	-				+2.0
2,695,885	+				+0.2
2,695,894	-				+1.1
2,695,946	-				+1.8
2,696,318	+				-0.5
2,696,318	+				-1.0
2,696,318	+				+0.2
2,696,318	+				+2.4
2,696,326	-				+0.6
2,696,326	-				+1.1
2,696,326	-				+0.3
2,696,326	-				+1.4
2,696,326	-				+1.0
2,696,326	-				+1.0
2,696,326	-				+1.0
2,696,326	-				+2.1
2,696,326	-				+0.8
2,696,349	-				+1.2
2,696,375	-				+0.9
2,696,390	+				-0.2
2,696,395	+				+2.8
2,696,395	+				+2.8
2,696,403	-				+0.0
2,696,403	-				+0.8
2,696,403	-				-0.2
2,696,403	-				-1.5
2,696,403	-				-0.2
2,696,426	+				+2.1
2,696,453	+				-0.7
2,696,456	-				-1.8
2,696,471	+				-0.7
2,696,471	+				+0.5
2,696,471	+				+0.6
2,696,471	+				-1.9
2,696,471	+				+0.9
2,696,476	+				+0.5
2,696,476	+				+0.4
2,696,478	-				+0.1
2,696,479	-				+0.5
2,696,499	-				-0.9
2,696,527	-		CCNA_02548	0.13	-0.7
2,696,540	+		CCNA_02548	0.15	+1.1
2,696,549	+		CCNA_02548	0.17	+0.6
2,696,567	+		CCNA_02548	0.20	-0.9
2,696,575	-		CCNA_02548	0.21	+0.7
2,696,588	+		CCNA_02548	0.23	+0.1
2,696,588	+		CCNA_02548	0.23	+0.4
2,696,598	+		CCNA_02548	0.24	+0.4
2,696,598	+		CCNA_02548	0.24	-0.3
2,696,606	-		CCNA_02548	0.26	-0.8
2,696,607	-		CCNA_02548	0.26	+1.6
2,696,620	+		CCNA_02548	0.28	-0.2
2,696,621	+		CCNA_02548	0.28	-0.5
2,696,629	-		CCNA_02548	0.29	+0.6
2,696,634	-		CCNA_02548	0.30	-0.3
2,696,656	+		CCNA_02548	0.33	+0.2
2,696,692	+		CCNA_02548	0.39	+0.3
2,696,700	-		CCNA_02548	0.40	-1.7
2,696,700	-		CCNA_02548	0.40	+0.6
2,696,700	-		CCNA_02548	0.40	+1.9
2,696,700	-		CCNA_02548	0.40	+0.2
2,696,700	-		CCNA_02548	0.40	-0.8
2,696,700	-		CCNA_02548	0.40	-0.7
2,696,720	+		CCNA_02548	0.43	+0.1
2,696,721	+		CCNA_02548	0.43	-0.1
2,696,724	-		CCNA_02548	0.44	+0.7
2,696,725	-		CCNA_02548	0.44	+1.2
2,696,741	-		CCNA_02548	0.46	+1.1
2,696,751	+		CCNA_02548	0.48	+0.3
2,696,752	-		CCNA_02548	0.48	+0.1
2,696,758	+		CCNA_02548	0.49	+0.3
2,696,758	+		CCNA_02548	0.49	+0.1
2,696,766	-		CCNA_02548	0.50	+0.6
2,696,766	-		CCNA_02548	0.50	-0.0
2,696,804	+		CCNA_02548	0.56	+1.2
2,696,804	+		CCNA_02548	0.56	-0.1
2,696,805	+		CCNA_02548	0.56	-1.3
2,696,825	+		CCNA_02548	0.59	+0.4
2,696,826	-		CCNA_02548	0.60	+1.8
2,696,827	-		CCNA_02548	0.60	+0.2
2,696,830	+		CCNA_02548	0.60	-1.3
2,696,835	+		CCNA_02548	0.61	+1.8
2,696,838	-		CCNA_02548	0.61	+0.2
2,696,851	+		CCNA_02548	0.63	-0.2
2,696,872	+		CCNA_02548	0.67	-0.8
2,696,883	+		CCNA_02548	0.68	-1.7
2,696,883	+		CCNA_02548	0.68	-0.1
2,696,888	+		CCNA_02548	0.69	-1.5
2,696,888	+		CCNA_02548	0.69	+2.0
2,696,888	+		CCNA_02548	0.69	-0.4
2,696,888	+		CCNA_02548	0.69	-0.3
2,696,888	+		CCNA_02548	0.69	-1.0
2,696,888	+		CCNA_02548	0.69	+0.2
2,696,896	-		CCNA_02548	0.70	-0.7
2,696,896	-		CCNA_02548	0.70	-0.2
2,696,916	+		CCNA_02548	0.73	-1.7
2,696,936	-		CCNA_02548	0.77	+0.2
2,696,958	+		CCNA_02548	0.80	+1.6
2,696,961	-		CCNA_02548	0.80	-2.0
2,696,999	+		CCNA_02548	0.86	-2.2
2,697,022	-		CCNA_02548	0.90	-1.7
2,697,049	+				-0.4
2,697,119	+				+1.5
2,697,172	+				+0.1
2,697,180	-		CCNA_02549	0.11	+0.7
2,697,181	-		CCNA_02549	0.11	-0.9
2,697,200	+		CCNA_02549	0.13	-1.0
2,697,208	-		CCNA_02549	0.14	+1.0
2,697,229	-		CCNA_02549	0.16	+0.0
2,697,236	+		CCNA_02549	0.17	+0.0
2,697,267	+		CCNA_02549	0.21	+1.6
2,697,267	+		CCNA_02549	0.21	+1.2
2,697,267	+		CCNA_02549	0.21	-0.1
2,697,275	-		CCNA_02549	0.21	+2.1
2,697,296	-		CCNA_02549	0.24	+1.7
2,697,303	+		CCNA_02549	0.25	+1.3
2,697,303	+		CCNA_02549	0.25	-1.0
2,697,303	+		CCNA_02549	0.25	-0.1
2,697,311	-		CCNA_02549	0.25	-0.1
2,697,311	-		CCNA_02549	0.25	+3.4
2,697,311	-		CCNA_02549	0.25	+0.0