Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02523

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,671,588	-				+0.6
2,671,591	-				+1.6
2,671,626	+				-0.4
2,671,634	-				+0.3
2,671,634	-				-0.1
2,671,634	-				+0.6
2,671,688	-				+2.4
2,671,698	-				-1.5
2,671,698	-				+0.6
2,671,698	-				+0.2
2,671,744	+		CCNA_02522	0.11	+2.2
2,671,744	+		CCNA_02522	0.11	+0.4
2,671,744	+		CCNA_02522	0.11	-0.4
2,671,744	+		CCNA_02522	0.11	+0.2
2,671,766	-		CCNA_02522	0.16	+1.0
2,671,783	+		CCNA_02522	0.20	+0.6
2,671,788	-		CCNA_02522	0.21	+0.3
2,671,803	+		CCNA_02522	0.24	-0.0
2,671,808	+		CCNA_02522	0.25	-0.4
2,671,824	+		CCNA_02522	0.29	+0.5
2,671,836	+		CCNA_02522	0.32	+0.7
2,671,836	+		CCNA_02522	0.32	-0.0
2,671,836	+		CCNA_02522	0.32	+0.7
2,671,837	+		CCNA_02522	0.32	+2.1
2,671,837	+		CCNA_02522	0.32	+1.1
2,671,837	+		CCNA_02522	0.32	+0.2
2,671,837	+		CCNA_02522	0.32	+0.8
2,671,839	+		CCNA_02522	0.32	+0.2
2,671,839	+		CCNA_02522	0.32	+1.1
2,671,839	+		CCNA_02522	0.32	+0.3
2,671,844	-		CCNA_02522	0.33	+0.4
2,671,845	-		CCNA_02522	0.34	+2.6
2,671,845	-		CCNA_02522	0.34	-0.4
2,671,845	-		CCNA_02522	0.34	-1.4
2,671,845	-		CCNA_02522	0.34	+1.6
2,671,845	-		CCNA_02522	0.34	-0.5
2,671,845	-		CCNA_02522	0.34	-0.4
2,671,845	-		CCNA_02522	0.34	+1.3
2,671,845	-		CCNA_02522	0.34	+0.5
2,671,849	+		CCNA_02522	0.34	-0.2
2,671,852	-		CCNA_02522	0.35	+0.9
2,671,860	+		CCNA_02522	0.37	+1.2
2,671,868	-		CCNA_02522	0.39	+2.0
2,671,887	+		CCNA_02522	0.43	+0.8
2,671,895	-		CCNA_02522	0.45	+1.1
2,671,895	-		CCNA_02522	0.45	+1.8
2,671,928	-		CCNA_02522	0.52	-0.4
2,671,952	-		CCNA_02522	0.57	-1.2
2,671,965	+		CCNA_02522	0.60	+3.4
2,671,972	+		CCNA_02522	0.62	+2.1
2,671,972	+		CCNA_02522	0.62	+0.4
2,671,980	-		CCNA_02522	0.63	-0.8
2,671,996	+		CCNA_02522	0.67	+0.3
2,672,004	-		CCNA_02522	0.69	+0.7
2,672,010	+		CCNA_02522	0.70	+1.0
2,672,016	+		CCNA_02522	0.71	+0.2
2,672,017	+		CCNA_02522	0.72	+0.9
2,672,017	+		CCNA_02522	0.72	+2.1
2,672,022	+		CCNA_02522	0.73	+0.9
2,672,022	+		CCNA_02522	0.73	+3.1
2,672,025	-		CCNA_02522	0.73	+1.8
2,672,053	+		CCNA_02522	0.79	-0.6
2,672,053	+		CCNA_02522	0.79	-1.6
2,672,054	+		CCNA_02522	0.80	-0.2
2,672,061	-		CCNA_02522	0.81	+0.5
2,672,125	-				+1.0
2,672,133	-				+1.4
2,672,135	-				-1.1
2,672,177	+				-1.4
2,672,207	+				-0.6
2,672,215	-				-0.7
2,672,226	-				-0.7
2,672,276	-				+0.7
2,672,295	+				-0.7
2,672,322	+				+0.8
2,672,330	-				+0.6
2,672,384	+				+1.2
2,672,392	+				+2.2
2,672,419	-				+2.2
2,672,438	+		CCNA_02523	0.12	-0.6
2,672,441	-		CCNA_02523	0.12	-0.1
2,672,446	-		CCNA_02523	0.13	-0.1
2,672,462	+		CCNA_02523	0.17	+0.4
2,672,470	-		CCNA_02523	0.18	+0.7
2,672,478	+		CCNA_02523	0.20	+0.4
2,672,487	-		CCNA_02523	0.22	+2.4
2,672,492	-		CCNA_02523	0.23	-0.9
2,672,553	-		CCNA_02523	0.35	-0.8
2,672,593	+		CCNA_02523	0.43	+2.8
2,672,603	-		CCNA_02523	0.45	+0.6
2,672,616	-		CCNA_02523	0.48	-0.5
2,672,617	-		CCNA_02523	0.48	-0.4
2,672,652	+		CCNA_02523	0.55	+2.1
2,672,703	-		CCNA_02523	0.65	+0.8
2,672,709	+		CCNA_02523	0.66	+2.2
2,672,709	+		CCNA_02523	0.66	+1.9
2,672,717	-		CCNA_02523	0.68	-1.3
2,672,717	-		CCNA_02523	0.68	+0.7
2,672,717	-		CCNA_02523	0.68	-1.0
2,672,725	+		CCNA_02523	0.70	+2.6
2,672,746	+		CCNA_02523	0.74	+3.1
2,672,746	+		CCNA_02523	0.74	+1.7
2,672,751	+		CCNA_02523	0.75	+2.0
2,672,751	+		CCNA_02523	0.75	+2.7
2,672,754	-		CCNA_02523	0.76	+0.6
2,672,754	-		CCNA_02523	0.76	+0.6
2,672,755	+		CCNA_02523	0.76	+3.2
2,672,756	+		CCNA_02523	0.76	+1.9
2,672,759	-		CCNA_02523	0.77	+0.7
2,672,765	+		CCNA_02523	0.78	+2.0
2,672,765	+		CCNA_02523	0.78	+1.9
2,672,765	+		CCNA_02523	0.78	+2.1
2,672,765	+		CCNA_02523	0.78	+3.4
2,672,765	+		CCNA_02523	0.78	+1.1
2,672,773	-		CCNA_02523	0.79	+0.1
2,672,773	-		CCNA_02523	0.79	+1.6
2,672,773	-		CCNA_02523	0.79	-0.2
2,672,775	+		CCNA_02523	0.80	+2.4
2,672,781	-		CCNA_02523	0.81	-1.2
2,672,781	-		CCNA_02523	0.81	+1.0
2,672,806	-		CCNA_02523	0.86	+1.4
2,672,852	+				+2.7
2,672,878	-				+1.0
2,672,884	-				-0.8
2,672,910	+				+0.4
2,672,938	+				-0.3
2,672,946	-				+1.1
2,672,956	+				+0.2
2,672,959	-				+1.4
2,672,964	-				+2.0
2,672,964	-				-0.5
2,672,964	-				+0.6
2,672,974	+				+0.0
2,672,982	-				+1.7
2,673,001	-				+0.6
2,673,007	+		CCNA_03899	0.11	+0.8
2,673,009	-		CCNA_03899	0.11	+1.3
2,673,010	+		CCNA_03899	0.12	-1.2
2,673,018	-		CCNA_03899	0.13	-0.5
2,673,052	+		CCNA_03899	0.20	-0.8
2,673,065	+		CCNA_03899	0.23	+1.7
2,673,067	-		CCNA_03899	0.23	+0.9
2,673,073	+		CCNA_03899	0.24	+0.5
2,673,073	-		CCNA_03899	0.24	+2.3
2,673,080	+		CCNA_03899	0.26	+0.8
2,673,109	+		CCNA_03899	0.32	-0.4
2,673,122	-		CCNA_03899	0.34	+1.2
2,673,127	-		CCNA_03899	0.35	+0.8
2,673,146	+		CCNA_03899	0.39	+1.3
2,673,146	+		CCNA_03899	0.39	-0.4
2,673,151	+		CCNA_03899	0.40	-1.4
2,673,183	-		CCNA_03899	0.47	+0.2
2,673,317	-		CCNA_03899	0.74	+0.3
2,673,330	+		CCNA_03899	0.77	-0.5
2,673,330	+		CCNA_03899	0.77	+1.0
2,673,346	+		CCNA_03899	0.80	-0.9
2,673,347	+		CCNA_03899	0.80	+2.4
2,673,348	+		CCNA_03899	0.80	-2.0
2,673,355	-		CCNA_03899	0.82	+0.0
2,673,395	+				+1.4
2,673,405	+				+0.7
2,673,405	+				-1.2
2,673,413	-				+2.3
2,673,415	-				-0.2
2,673,439	+				+1.4
2,673,447	-				-0.4
2,673,450	+				-0.5
2,673,450	+				-0.6
2,673,453	-				+1.2
2,673,458	-				-0.3
2,673,468	-				+0.3
2,673,486	-				-0.4
2,673,486	-				+0.4
2,673,494	-				-1.4
2,673,537	+				+3.4
2,673,554	-				-0.4
2,673,572	-				+0.0
2,673,582	+				+1.2
2,673,582	+				-0.3
2,673,590	-				+0.2
2,673,590	-				+0.3
2,673,644	+				+0.4
2,673,717	+		CCNA_02525	0.11	+2.2
2,673,723	-		CCNA_02525	0.11	+1.0
2,673,725	-		CCNA_02525	0.12	-0.3
2,673,767	-		CCNA_02525	0.16	+2.8
2,673,767	-		CCNA_02525	0.16	+2.1
2,673,782	-		CCNA_02525	0.17	+0.6
2,673,818	+		CCNA_02525	0.21	+2.2
2,673,844	+		CCNA_02525	0.24	-1.3
2,673,873	+		CCNA_02525	0.26	+0.2