Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02513

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,662,316	+		CCNA_02511	0.80	+2.0
2,662,361	+		CCNA_02511	0.84	-1.4
2,662,373	+		CCNA_02511	0.85	+0.2
2,662,373	+		CCNA_02511	0.85	-1.2
2,662,381	-		CCNA_02511	0.85	-1.0
2,662,381	-		CCNA_02511	0.85	-0.1
2,662,415	-		CCNA_02511	0.88	+0.9
2,662,415	-		CCNA_02511	0.88	+0.5
2,662,440	-		CCNA_02511	0.90	+0.6
2,662,440	-		CCNA_02511	0.90	+1.0
2,662,449	+				-0.3
2,662,519	+				-0.1
2,662,527	-				+1.1
2,662,527	-				-0.1
2,662,527	-				-0.6
2,662,527	-				+0.4
2,662,527	-				+1.5
2,662,542	+				-0.6
2,662,542	+				+1.0
2,662,550	-				-0.2
2,662,550	-				+0.4
2,662,619	+				+3.1
2,662,624	+				-0.3
2,662,629	+				+1.0
2,662,632	-				+0.5
2,662,669	-		CCNA_02512	0.15	+0.5
2,662,669	-		CCNA_02512	0.15	+1.4
2,662,672	-		CCNA_02512	0.15	+1.7
2,662,677	-		CCNA_02512	0.16	+1.5
2,662,682	-		CCNA_02512	0.17	+2.0
2,662,723	-		CCNA_02512	0.23	+1.3
2,662,753	+		CCNA_02512	0.27	+1.1
2,662,775	+		CCNA_02512	0.30	-1.1
2,662,775	+		CCNA_02512	0.30	-0.2
2,662,783	-		CCNA_02512	0.31	+1.9
2,662,797	+		CCNA_02512	0.33	+1.6
2,662,807	+		CCNA_02512	0.34	+2.0
2,662,864	-		CCNA_02512	0.43	+1.3
2,662,947	+		CCNA_02512	0.54	+0.7
2,662,953	+		CCNA_02512	0.55	-1.4
2,662,956	-		CCNA_02512	0.56	+0.4
2,663,080	+		CCNA_02512	0.73	+0.0
2,663,088	-		CCNA_02512	0.75	-0.1
2,663,088	-		CCNA_02512	0.75	+1.3
2,663,210	-				-0.7
2,663,229	+				+1.2
2,663,229	+				+1.2
2,663,231	+				+0.3
2,663,237	-				+0.8
2,663,237	-				+0.9
2,663,237	-				+1.0
2,663,237	-				+2.2
2,663,246	-				+0.8
2,663,314	-				+1.7
2,663,320	+				-0.8
2,663,328	-				+1.8
2,663,344	+				+1.1
2,663,372	+				-0.9
2,663,376	+				+1.3
2,663,380	-				+1.0
2,663,407	+				-0.6
2,663,434	+				+1.5
2,663,442	-				+2.5
2,663,442	-				+1.9
2,663,442	-				+1.0
2,663,482	+		CCNA_02513	0.11	-0.6
2,663,490	-		CCNA_02513	0.12	-1.2
2,663,490	-		CCNA_02513	0.12	+2.2
2,663,497	+		CCNA_02513	0.12	-0.7
2,663,497	+		CCNA_02513	0.12	+0.7
2,663,521	-		CCNA_02513	0.14	+0.1
2,663,548	-		CCNA_02513	0.16	-0.1
2,663,621	+		CCNA_02513	0.20	+1.1
2,663,627	+		CCNA_02513	0.21	-0.4
2,663,629	-		CCNA_02513	0.21	+1.3
2,663,639	-		CCNA_02513	0.21	+1.7
2,663,715	+		CCNA_02513	0.26	-0.2
2,663,729	+		CCNA_02513	0.27	-0.7
2,663,745	-		CCNA_02513	0.28	+1.2
2,663,770	+		CCNA_02513	0.30	-0.3
2,663,774	-		CCNA_02513	0.30	+1.4
2,663,789	-		CCNA_02513	0.31	+1.5
2,663,805	-		CCNA_02513	0.32	+2.1
2,663,818	+		CCNA_02513	0.33	+1.2
2,663,833	-		CCNA_02513	0.34	+1.0
2,663,856	-		CCNA_02513	0.36	+1.8
2,663,858	+		CCNA_02513	0.36	+1.8
2,663,858	+		CCNA_02513	0.36	+1.1
2,663,903	+		CCNA_02513	0.39	-0.1
2,663,936	-		CCNA_02513	0.41	+4.3
2,663,950	-		CCNA_02513	0.42	+2.6
2,663,975	-		CCNA_02513	0.43	+1.7
2,664,035	+		CCNA_02513	0.47	-2.0
2,664,035	+		CCNA_02513	0.47	+0.6
2,664,035	+		CCNA_02513	0.47	-1.5
2,664,038	-		CCNA_02513	0.47	+3.3
2,664,055	+		CCNA_02513	0.48	+1.4
2,664,066	-		CCNA_02513	0.49	+0.1
2,664,069	+		CCNA_02513	0.49	+0.6
2,664,074	+		CCNA_02513	0.50	-0.4
2,664,098	-		CCNA_02513	0.51	+1.2
2,664,121	-		CCNA_02513	0.53	+0.3
2,664,170	+		CCNA_02513	0.56	+1.6
2,664,218	-		CCNA_02513	0.59	+0.0
2,664,248	+		CCNA_02513	0.61	+1.5
2,664,248	+		CCNA_02513	0.61	+1.4
2,664,278	-		CCNA_02513	0.63	+0.9
2,664,291	+		CCNA_02513	0.64	-1.6
2,664,301	-		CCNA_02513	0.64	+1.7
2,664,312	-		CCNA_02513	0.65	+1.5
2,664,320	+		CCNA_02513	0.66	+1.1
2,664,387	-		CCNA_02513	0.70	+0.9
2,664,403	+		CCNA_02513	0.71	+0.6
2,664,446	+		CCNA_02513	0.74	+0.4
2,664,521	+		CCNA_02513	0.79	+0.1
2,664,527	+		CCNA_02513	0.79	+0.5
2,664,529	-		CCNA_02513	0.79	+1.2
2,664,529	-		CCNA_02513	0.79	+0.4
2,664,643	+		CCNA_02513	0.87	+4.4
2,664,648	+		CCNA_02513	0.87	+0.2
2,664,664	-		CCNA_02513	0.88	+0.0
2,664,732	+				-0.4
2,664,732	+				-1.3
2,664,740	-				+1.0
2,664,745	-				-0.5
2,664,805	+				-1.7
2,664,812	+				-0.7
2,664,837	+				+0.6
2,664,861	+				+2.1
2,664,861	+				-0.9
2,664,869	-				+1.0
2,664,869	-				-0.0
2,664,873	-				+1.3
2,664,901	-				+3.9
2,664,901	-				+3.9
2,664,925	+				+2.1
2,664,928	+				+1.5
2,664,950	+				+1.7
2,664,950	+				-0.4
2,664,950	+				+1.7
2,664,958	-				-0.5
2,664,958	-				-0.8
2,664,958	-				+2.8
2,664,980	-				+0.1
2,664,982	-				+0.9
2,665,007	+		CCNA_02514	0.10	+1.5
2,665,007	+		CCNA_02514	0.10	+1.2
2,665,015	-		CCNA_02514	0.11	+0.7
2,665,015	-		CCNA_02514	0.11	+0.7
2,665,015	-		CCNA_02514	0.11	+0.5
2,665,022	+		CCNA_02514	0.12	+0.6
2,665,027	+		CCNA_02514	0.13	+0.8
2,665,030	-		CCNA_02514	0.13	+1.0
2,665,052	-		CCNA_02514	0.16	+1.2
2,665,082	-		CCNA_02514	0.20	+2.5
2,665,087	-		CCNA_02514	0.21	-0.1
2,665,126	+		CCNA_02514	0.26	-0.1
2,665,154	+		CCNA_02514	0.30	-0.7
2,665,250	-		CCNA_02514	0.43	+0.6
2,665,263	+		CCNA_02514	0.45	+1.0
2,665,270	-		CCNA_02514	0.45	-1.3
2,665,293	-		CCNA_02514	0.49	+1.0
2,665,298	+		CCNA_02514	0.49	+1.5
2,665,320	+		CCNA_02514	0.52	+0.3
2,665,321	+		CCNA_02514	0.52	-1.5
2,665,330	-		CCNA_02514	0.54	-1.2
2,665,399	+		CCNA_02514	0.63	+1.2
2,665,399	+		CCNA_02514	0.63	+1.7
2,665,403	+		CCNA_02514	0.63	-0.9
2,665,418	+		CCNA_02514	0.65	-0.3
2,665,466	-		CCNA_02514	0.72	+0.0
2,665,509	+		CCNA_02514	0.78	-0.0
2,665,514	+		CCNA_02514	0.78	-0.1
2,665,514	+		CCNA_02514	0.78	-1.0
2,665,562	+		CCNA_02514	0.85	+1.6
2,665,715	-				+0.5
2,665,719	+				+0.1
2,665,727	-				+1.3
2,665,746	+		CCNA_02515	0.11	+0.3
2,665,774	+		CCNA_02515	0.21	-1.0
2,665,782	-		CCNA_02515	0.24	-0.1
2,665,786	-		CCNA_02515	0.25	-0.8
2,665,798	+		CCNA_02515	0.29	+0.1
2,665,806	-		CCNA_02515	0.32	+1.8
2,665,812	-		CCNA_02515	0.34	+1.3
2,665,813	-		CCNA_02515	0.35	+0.5
2,665,824	+		CCNA_02515	0.39	-1.0
2,665,837	+		CCNA_02515	0.43	-0.4
2,665,845	-		CCNA_02515	0.46	-1.7