Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02512

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,661,604	-		CCNA_02511	0.24	+1.2
2,661,609	-		CCNA_02511	0.24	-0.8
2,661,609	-		CCNA_02511	0.24	+0.5
2,661,634	+		CCNA_02511	0.26	+0.2
2,661,651	+		CCNA_02511	0.28	-0.9
2,661,651	+		CCNA_02511	0.28	-0.9
2,661,651	+		CCNA_02511	0.28	+0.2
2,661,651	+		CCNA_02511	0.28	+0.5
2,661,651	+		CCNA_02511	0.28	-0.5
2,661,652	+		CCNA_02511	0.28	-0.0
2,661,659	-		CCNA_02511	0.28	-1.4
2,661,659	-		CCNA_02511	0.28	+0.6
2,661,659	-		CCNA_02511	0.28	-1.2
2,661,659	-		CCNA_02511	0.28	-1.4
2,661,659	-		CCNA_02511	0.28	-1.8
2,661,705	-		CCNA_02511	0.32	+0.6
2,661,730	+		CCNA_02511	0.34	+0.0
2,661,742	+		CCNA_02511	0.35	-0.8
2,661,742	+		CCNA_02511	0.35	-0.1
2,661,742	+		CCNA_02511	0.35	-0.3
2,661,755	+		CCNA_02511	0.36	+0.2
2,661,793	+		CCNA_02511	0.39	-0.9
2,661,825	+		CCNA_02511	0.41	+0.0
2,661,871	+		CCNA_02511	0.45	+0.3
2,661,885	-		CCNA_02511	0.46	-0.6
2,661,899	-		CCNA_02511	0.47	-0.4
2,661,901	+		CCNA_02511	0.47	-0.4
2,661,901	+		CCNA_02511	0.47	+1.1
2,661,909	-		CCNA_02511	0.48	-0.1
2,661,909	-		CCNA_02511	0.48	-0.8
2,661,909	-		CCNA_02511	0.48	-1.8
2,661,909	-		CCNA_02511	0.48	-0.6
2,661,927	+		CCNA_02511	0.49	-0.4
2,661,933	+		CCNA_02511	0.50	+2.4
2,661,940	+		CCNA_02511	0.50	-0.3
2,661,948	-		CCNA_02511	0.51	+2.1
2,661,948	-		CCNA_02511	0.51	-1.5
2,662,004	-		CCNA_02511	0.55	+0.7
2,662,047	+		CCNA_02511	0.59	+1.6
2,662,048	-		CCNA_02511	0.59	-1.4
2,662,054	-		CCNA_02511	0.59	+0.8
2,662,103	+		CCNA_02511	0.63	-0.6
2,662,133	-		CCNA_02511	0.66	-0.3
2,662,141	+		CCNA_02511	0.66	-1.7
2,662,148	-		CCNA_02511	0.67	+1.9
2,662,177	-		CCNA_02511	0.69	+1.0
2,662,177	-		CCNA_02511	0.69	+0.2
2,662,191	+		CCNA_02511	0.70	-0.4
2,662,205	-		CCNA_02511	0.71	+0.7
2,662,285	+		CCNA_02511	0.78	+0.6
2,662,316	+		CCNA_02511	0.80	+2.0
2,662,361	+		CCNA_02511	0.84	-1.4
2,662,373	+		CCNA_02511	0.85	+0.2
2,662,373	+		CCNA_02511	0.85	-1.2
2,662,381	-		CCNA_02511	0.85	-1.0
2,662,381	-		CCNA_02511	0.85	-0.1
2,662,415	-		CCNA_02511	0.88	+0.9
2,662,415	-		CCNA_02511	0.88	+0.5
2,662,440	-		CCNA_02511	0.90	+0.6
2,662,440	-		CCNA_02511	0.90	+1.0
2,662,449	+				-0.3
2,662,519	+				-0.1
2,662,527	-				+1.1
2,662,527	-				-0.1
2,662,527	-				-0.6
2,662,527	-				+0.4
2,662,527	-				+1.5
2,662,542	+				-0.6
2,662,542	+				+1.0
2,662,550	-				-0.2
2,662,550	-				+0.4
2,662,619	+				+3.1
2,662,624	+				-0.3
2,662,629	+				+1.0
2,662,632	-				+0.5
2,662,669	-		CCNA_02512	0.15	+0.5
2,662,669	-		CCNA_02512	0.15	+1.4
2,662,672	-		CCNA_02512	0.15	+1.7
2,662,677	-		CCNA_02512	0.16	+1.5
2,662,682	-		CCNA_02512	0.17	+2.0
2,662,723	-		CCNA_02512	0.23	+1.3
2,662,753	+		CCNA_02512	0.27	+1.1
2,662,775	+		CCNA_02512	0.30	-1.1
2,662,775	+		CCNA_02512	0.30	-0.2
2,662,783	-		CCNA_02512	0.31	+1.9
2,662,797	+		CCNA_02512	0.33	+1.6
2,662,807	+		CCNA_02512	0.34	+2.0
2,662,864	-		CCNA_02512	0.43	+1.3
2,662,947	+		CCNA_02512	0.54	+0.7
2,662,953	+		CCNA_02512	0.55	-1.4
2,662,956	-		CCNA_02512	0.56	+0.4
2,663,080	+		CCNA_02512	0.73	+0.0
2,663,088	-		CCNA_02512	0.75	-0.1
2,663,088	-		CCNA_02512	0.75	+1.3
2,663,210	-				-0.7
2,663,229	+				+1.2
2,663,229	+				+1.2
2,663,231	+				+0.3
2,663,237	-				+0.8
2,663,237	-				+0.9
2,663,237	-				+1.0
2,663,237	-				+2.2
2,663,246	-				+0.8
2,663,314	-				+1.7
2,663,320	+				-0.8
2,663,328	-				+1.8
2,663,344	+				+1.1
2,663,372	+				-0.9
2,663,376	+				+1.3
2,663,380	-				+1.0
2,663,407	+				-0.6
2,663,434	+				+1.5
2,663,442	-				+2.5
2,663,442	-				+1.9
2,663,442	-				+1.0
2,663,482	+		CCNA_02513	0.11	-0.6
2,663,490	-		CCNA_02513	0.12	-1.2
2,663,490	-		CCNA_02513	0.12	+2.2
2,663,497	+		CCNA_02513	0.12	-0.7
2,663,497	+		CCNA_02513	0.12	+0.7
2,663,521	-		CCNA_02513	0.14	+0.1
2,663,548	-		CCNA_02513	0.16	-0.1
2,663,621	+		CCNA_02513	0.20	+1.1
2,663,627	+		CCNA_02513	0.21	-0.4
2,663,629	-		CCNA_02513	0.21	+1.3
2,663,639	-		CCNA_02513	0.21	+1.7
2,663,715	+		CCNA_02513	0.26	-0.2
2,663,729	+		CCNA_02513	0.27	-0.7
2,663,745	-		CCNA_02513	0.28	+1.2
2,663,770	+		CCNA_02513	0.30	-0.3
2,663,774	-		CCNA_02513	0.30	+1.4
2,663,789	-		CCNA_02513	0.31	+1.5
2,663,805	-		CCNA_02513	0.32	+2.1
2,663,818	+		CCNA_02513	0.33	+1.2
2,663,833	-		CCNA_02513	0.34	+1.0
2,663,856	-		CCNA_02513	0.36	+1.8
2,663,858	+		CCNA_02513	0.36	+1.8
2,663,858	+		CCNA_02513	0.36	+1.1
2,663,903	+		CCNA_02513	0.39	-0.1
2,663,936	-		CCNA_02513	0.41	+4.3
2,663,950	-		CCNA_02513	0.42	+2.6
2,663,975	-		CCNA_02513	0.43	+1.7
2,664,035	+		CCNA_02513	0.47	-2.0
2,664,035	+		CCNA_02513	0.47	+0.6
2,664,035	+		CCNA_02513	0.47	-1.5
2,664,038	-		CCNA_02513	0.47	+3.3
2,664,055	+		CCNA_02513	0.48	+1.4
2,664,066	-		CCNA_02513	0.49	+0.1
2,664,069	+		CCNA_02513	0.49	+0.6
2,664,074	+		CCNA_02513	0.50	-0.4
2,664,098	-		CCNA_02513	0.51	+1.2
2,664,121	-		CCNA_02513	0.53	+0.3
2,664,170	+		CCNA_02513	0.56	+1.6
2,664,218	-		CCNA_02513	0.59	+0.0
2,664,248	+		CCNA_02513	0.61	+1.5
2,664,248	+		CCNA_02513	0.61	+1.4