Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02510

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,659,536	+				+0.5
2,659,559	-				-0.4
2,659,568	+				+1.2
2,659,578	-				-0.4
2,659,578	-				-1.1
2,659,589	+				-1.3
2,659,618	-				+1.4
2,659,665	+				-2.9
2,659,670	+				-0.2
2,659,683	-				-0.0
2,659,708	+		CCNA_02509	0.12	+2.7
2,659,708	+		CCNA_02509	0.12	+0.2
2,659,708	+		CCNA_02509	0.12	+0.3
2,659,708	+		CCNA_02509	0.12	-0.2
2,659,708	+		CCNA_02509	0.12	-1.7
2,659,711	-		CCNA_02509	0.12	-2.3
2,659,715	+		CCNA_02509	0.12	+2.6
2,659,715	+		CCNA_02509	0.12	+0.7
2,659,715	+		CCNA_02509	0.12	+0.8
2,659,716	-		CCNA_02509	0.12	-0.6
2,659,716	-		CCNA_02509	0.12	-1.2
2,659,716	-		CCNA_02509	0.12	-0.9
2,659,716	-		CCNA_02509	0.12	-1.0
2,659,716	-		CCNA_02509	0.12	+1.7
2,659,716	-		CCNA_02509	0.12	+1.1
2,659,716	-		CCNA_02509	0.12	+1.4
2,659,720	+		CCNA_02509	0.13	-0.7
2,659,734	-		CCNA_02509	0.14	+1.2
2,659,812	-		CCNA_02509	0.23	+1.0
2,659,902	+		CCNA_02509	0.32	-0.0
2,659,923	+		CCNA_02509	0.35	-2.1
2,659,949	+		CCNA_02509	0.37	+1.8
2,659,965	-		CCNA_02509	0.39	+0.8
2,659,970	-		CCNA_02509	0.40	-0.1
2,660,004	+		CCNA_02509	0.43	+1.4
2,660,019	+		CCNA_02509	0.45	+1.9
2,660,019	+		CCNA_02509	0.45	+1.4
2,660,023	-		CCNA_02509	0.45	-0.3
2,660,024	+		CCNA_02509	0.45	-1.6
2,660,050	-		CCNA_02509	0.48	-1.8
2,660,053	+		CCNA_02509	0.49	-0.3
2,660,060	+		CCNA_02509	0.49	-2.5
2,660,060	+		CCNA_02509	0.49	-1.2
2,660,060	+		CCNA_02509	0.49	-0.3
2,660,060	+		CCNA_02509	0.49	+2.4
2,660,068	-		CCNA_02509	0.50	+1.0
2,660,068	-		CCNA_02509	0.50	-0.5
2,660,082	-		CCNA_02509	0.52	-0.3
2,660,095	+		CCNA_02509	0.53	-0.7
2,660,095	+		CCNA_02509	0.53	+2.3
2,660,138	-		CCNA_02509	0.58	-0.1
2,660,166	+		CCNA_02509	0.61	+2.1
2,660,186	+		CCNA_02509	0.63	+0.9
2,660,201	+		CCNA_02509	0.65	+1.2
2,660,209	-		CCNA_02509	0.65	-0.4
2,660,209	-		CCNA_02509	0.65	-0.6
2,660,209	-		CCNA_02509	0.65	-0.5
2,660,209	-		CCNA_02509	0.65	+0.7
2,660,231	-		CCNA_02509	0.68	-1.2
2,660,248	-		CCNA_02509	0.70	+0.8
2,660,281	-		CCNA_02509	0.73	+0.2
2,660,281	-		CCNA_02509	0.73	-0.0
2,660,354	+		CCNA_02509	0.81	-1.2
2,660,400	+		CCNA_02509	0.86	+0.4
2,660,403	-		CCNA_02509	0.86	-0.9
2,660,452	+				+2.8
2,660,460	-				-0.8
2,660,494	+				+0.8
2,660,494	+				-0.7
2,660,515	-				-1.0
2,660,515	-				+1.8
2,660,525	+				-0.8
2,660,559	-				-1.1
2,660,576	+				+1.3
2,660,614	+		CCNA_02510	0.11	+1.7
2,660,633	+		CCNA_02510	0.13	-0.0
2,660,655	+		CCNA_02510	0.16	+0.7
2,660,737	+		CCNA_02510	0.27	-0.1
2,660,737	+		CCNA_02510	0.27	+0.7
2,660,738	+		CCNA_02510	0.27	+1.1
2,660,745	-		CCNA_02510	0.28	+1.2
2,660,773	+		CCNA_02510	0.31	-0.9
2,660,825	-		CCNA_02510	0.38	-0.2
2,660,825	-		CCNA_02510	0.38	+0.5
2,660,855	-		CCNA_02510	0.42	+0.5
2,660,859	+		CCNA_02510	0.43	+1.4
2,660,899	+		CCNA_02510	0.48	+1.0
2,660,903	-		CCNA_02510	0.48	-1.6
2,660,907	+		CCNA_02510	0.49	+1.3
2,660,914	+		CCNA_02510	0.50	+0.1
2,660,922	-		CCNA_02510	0.51	-0.9
2,660,947	-		CCNA_02510	0.54	+1.1
2,660,954	+		CCNA_02510	0.55	+0.1
2,660,988	+		CCNA_02510	0.59	-0.9
2,660,988	+		CCNA_02510	0.59	+1.2
2,660,988	+		CCNA_02510	0.59	+1.1
2,660,988	+		CCNA_02510	0.59	-0.0
2,660,988	+		CCNA_02510	0.59	-0.3
2,660,988	+		CCNA_02510	0.59	+0.8
2,660,988	+				+4.1
2,660,996	-		CCNA_02510	0.60	+1.1
2,660,996	-		CCNA_02510	0.60	+0.6
2,660,996	-		CCNA_02510	0.60	-0.3
2,660,996	-		CCNA_02510	0.60	+0.0
2,661,012	+		CCNA_02510	0.62	+0.2
2,661,012	+		CCNA_02510	0.62	+1.2
2,661,012	+		CCNA_02510	0.62	+0.6
2,661,020	-		CCNA_02510	0.63	+0.5
2,661,020	-		CCNA_02510	0.63	-0.1
2,661,020	-		CCNA_02510	0.63	-0.9
2,661,028	+		CCNA_02510	0.64	+1.1
2,661,056	+		CCNA_02510	0.68	+0.5
2,661,061	+		CCNA_02510	0.69	+0.9
2,661,064	-		CCNA_02510	0.69	-0.2
2,661,135	+		CCNA_02510	0.78	+0.4
2,661,170	-		CCNA_02510	0.83	-0.2
2,661,201	+		CCNA_02510	0.87	-1.2
2,661,201	-		CCNA_02510	0.87	+1.0
2,661,204	-		CCNA_02510	0.87	-0.6
2,661,262	-				-2.3
2,661,305	-				+0.7
2,661,312	-				-0.3
2,661,320	+				+0.2
2,661,376	+				+0.8
2,661,384	-				+0.4
2,661,416	-				-0.8
2,661,425	-				+0.3
2,661,438	+		CCNA_02511	0.11	-1.2
2,661,438	+		CCNA_02511	0.11	-0.2
2,661,446	-		CCNA_02511	0.12	-0.6
2,661,467	+		CCNA_02511	0.13	-0.3
2,661,497	+		CCNA_02511	0.16	+0.8
2,661,514	-		CCNA_02511	0.17	-0.2
2,661,515	-		CCNA_02511	0.17	+1.0
2,661,530	+		CCNA_02511	0.18	-0.4
2,661,533	-		CCNA_02511	0.18	-0.3
2,661,538	-		CCNA_02511	0.19	-0.1
2,661,604	-		CCNA_02511	0.24	+1.2
2,661,609	-		CCNA_02511	0.24	-0.8
2,661,609	-		CCNA_02511	0.24	+0.5
2,661,634	+		CCNA_02511	0.26	+0.2
2,661,651	+		CCNA_02511	0.28	-0.9
2,661,651	+		CCNA_02511	0.28	-0.9
2,661,651	+		CCNA_02511	0.28	+0.2
2,661,651	+		CCNA_02511	0.28	+0.5
2,661,651	+		CCNA_02511	0.28	-0.5
2,661,652	+		CCNA_02511	0.28	-0.0
2,661,659	-		CCNA_02511	0.28	-1.4
2,661,659	-		CCNA_02511	0.28	+0.6
2,661,659	-		CCNA_02511	0.28	-1.2
2,661,659	-		CCNA_02511	0.28	-1.4
2,661,659	-		CCNA_02511	0.28	-1.8
2,661,705	-		CCNA_02511	0.32	+0.6
2,661,730	+		CCNA_02511	0.34	+0.0
2,661,742	+		CCNA_02511	0.35	-0.8
2,661,742	+		CCNA_02511	0.35	-0.1
2,661,742	+		CCNA_02511	0.35	-0.3
2,661,755	+		CCNA_02511	0.36	+0.2
2,661,793	+		CCNA_02511	0.39	-0.9
2,661,825	+		CCNA_02511	0.41	+0.0
2,661,871	+		CCNA_02511	0.45	+0.3
2,661,885	-		CCNA_02511	0.46	-0.6
2,661,899	-		CCNA_02511	0.47	-0.4
2,661,901	+		CCNA_02511	0.47	-0.4
2,661,901	+		CCNA_02511	0.47	+1.1
2,661,909	-		CCNA_02511	0.48	-0.1
2,661,909	-		CCNA_02511	0.48	-0.8
2,661,909	-		CCNA_02511	0.48	-1.8
2,661,909	-		CCNA_02511	0.48	-0.6
2,661,927	+		CCNA_02511	0.49	-0.4
2,661,933	+		CCNA_02511	0.50	+2.4
2,661,940	+		CCNA_02511	0.50	-0.3
2,661,948	-		CCNA_02511	0.51	+2.1
2,661,948	-		CCNA_02511	0.51	-1.5
2,662,004	-		CCNA_02511	0.55	+0.7
2,662,047	+		CCNA_02511	0.59	+1.6
2,662,048	-		CCNA_02511	0.59	-1.4
2,662,054	-		CCNA_02511	0.59	+0.8
2,662,103	+		CCNA_02511	0.63	-0.6
2,662,133	-		CCNA_02511	0.66	-0.3
2,662,141	+		CCNA_02511	0.66	-1.7
2,662,148	-		CCNA_02511	0.67	+1.9
2,662,177	-		CCNA_02511	0.69	+1.0
2,662,177	-		CCNA_02511	0.69	+0.2
2,662,191	+		CCNA_02511	0.70	-0.4
2,662,205	-		CCNA_02511	0.71	+0.7
2,662,285	+		CCNA_02511	0.78	+0.6