Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02467

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,610,023	+				+0.3
2,610,042	+		CCNA_02466	0.10	-0.2
2,610,045	+		CCNA_02466	0.10	-0.9
2,610,048	-		CCNA_02466	0.11	-0.8
2,610,051	-		CCNA_02466	0.11	+0.1
2,610,091	-		CCNA_02466	0.15	-2.5
2,610,094	+		CCNA_02466	0.15	-0.2
2,610,100	-		CCNA_02466	0.16	+0.6
2,610,101	-		CCNA_02466	0.16	+1.0
2,610,110	-		CCNA_02466	0.17	+0.1
2,610,151	+		CCNA_02466	0.21	+0.1
2,610,151	+		CCNA_02466	0.21	+0.3
2,610,217	+		CCNA_02466	0.28	+0.2
2,610,219	+		CCNA_02466	0.28	+1.3
2,610,227	-		CCNA_02466	0.29	-2.6
2,610,227	-		CCNA_02466	0.29	-0.3
2,610,261	-		CCNA_02466	0.32	-1.2
2,610,268	-		CCNA_02466	0.33	-0.8
2,610,281	-		CCNA_02466	0.34	+2.3
2,610,281	-		CCNA_02466	0.34	-0.6
2,610,288	+		CCNA_02466	0.35	+2.3
2,610,352	+		CCNA_02466	0.42	+0.6
2,610,371	-		CCNA_02466	0.44	-1.0
2,610,372	-		CCNA_02466	0.44	+0.2
2,610,423	-		CCNA_02466	0.49	-0.8
2,610,448	-		CCNA_02466	0.51	-0.6
2,610,472	+		CCNA_02466	0.54	+1.8
2,610,472	+		CCNA_02466	0.54	+0.1
2,610,483	+		CCNA_02466	0.55	+0.2
2,610,483	+		CCNA_02466	0.55	+1.8
2,610,509	+		CCNA_02466	0.58	+0.0
2,610,530	+		CCNA_02466	0.60	+0.1
2,610,596	+		CCNA_02466	0.66	-0.4
2,610,604	-		CCNA_02466	0.67	-0.4
2,610,619	-		CCNA_02466	0.69	-1.2
2,610,628	+		CCNA_02466	0.70	+1.2
2,610,745	-		CCNA_02466	0.82	+0.8
2,610,755	-		CCNA_02466	0.83	+0.4
2,610,781	+		CCNA_02466	0.85	+0.5
2,610,789	-		CCNA_02466	0.86	-0.2
2,610,824	-		CCNA_02466	0.90	+1.5
2,610,824	-		CCNA_02466	0.90	-1.2
2,610,838	-				-1.7
2,610,838	-				-0.4
2,610,868	-				-1.8
2,610,873	-				-1.0
2,610,994	+				+0.4
2,611,002	-				+3.5
2,611,012	-				+2.5
2,611,038	-		CCNA_02467	0.11	+3.5
2,611,047	+		CCNA_02467	0.12	+1.6
2,611,055	-		CCNA_02467	0.13	+3.4
2,611,092	-		CCNA_02467	0.19	+3.4
2,611,092	-		CCNA_02467	0.19	+3.0
2,611,123	-		CCNA_02467	0.24	+2.5
2,611,143	-		CCNA_02467	0.27	+2.6
2,611,154	-		CCNA_02467	0.29	+3.0
2,611,154	-		CCNA_02467	0.29	+1.6
2,611,167	-		CCNA_02467	0.31	+1.7
2,611,172	-		CCNA_02467	0.31	+2.7
2,611,172	-		CCNA_02467	0.31	+0.8
2,611,190	-		CCNA_02467	0.34	+1.6
2,611,197	-		CCNA_02467	0.35	+3.1
2,611,217	-		CCNA_02467	0.38	+3.5
2,611,218	-		CCNA_02467	0.38	+2.5
2,611,222	+				+1.8
2,611,288	-		CCNA_02467	0.49	+1.4
2,611,318	-		CCNA_02467	0.54	+1.7
2,611,318	-		CCNA_02467	0.54	+1.5
2,611,331	+		CCNA_02467	0.56	+0.9
2,611,331	+		CCNA_02467	0.56	+2.0
2,611,374	-		CCNA_02467	0.62	-1.2
2,611,432	+		CCNA_02467	0.71	+2.0
2,611,432	+		CCNA_02467	0.71	-0.4
2,611,440	-		CCNA_02467	0.72	+1.7
2,611,440	-		CCNA_02467	0.72	+0.7
2,611,443	+		CCNA_02467	0.73	-0.4
2,611,451	-		CCNA_02467	0.74	+2.5
2,611,457	+		CCNA_02467	0.75	+1.4
2,611,538	+		CCNA_02467	0.87	+0.1
2,611,552	-		CCNA_02467	0.89	+2.3
2,611,624	+				+1.7
2,611,624	+				-0.6
2,611,624	+				+0.2
2,611,632	-				-0.6
2,611,632	-				-0.5
2,611,632	-				-0.0
2,611,632	-				-1.9
2,611,632	-				+0.9
2,611,632	-				+0.6
2,611,634	-				-0.2
2,611,641	-				+0.4
2,611,661	+				+0.3
2,611,699	-		CCNA_02468	0.14	-0.1
2,611,714	-		CCNA_02468	0.19	+0.0
2,611,714	-		CCNA_02468	0.19	+0.5
2,611,756	+		CCNA_02468	0.36	-0.8
2,611,798	+		CCNA_02468	0.52	+0.2
2,611,806	-		CCNA_02468	0.55	+1.4
2,611,806	-		CCNA_02468	0.55	+0.4
2,611,855	-		CCNA_02468	0.74	+0.2
2,611,884	+		CCNA_02468	0.85	+0.0
2,611,922	+				+0.9
2,612,001	+				+1.7
2,612,001	+				+0.7
2,612,002	+				+0.0
2,612,004	-				+0.2
2,612,014	+				+1.2
2,612,014	+		CCNA_02469	0.11	+0.1
2,612,015	+		CCNA_02469	0.11	-0.8
2,612,023	-		CCNA_02469	0.12	+1.1
2,612,023	-		CCNA_02469	0.12	+1.3
2,612,023	-		CCNA_02469	0.12	+0.0
2,612,023	-		CCNA_02469	0.12	-0.9
2,612,035	+		CCNA_02469	0.14	+1.3
2,612,056	-		CCNA_02469	0.18	+0.6
2,612,059	+		CCNA_02469	0.18	+1.3
2,612,107	+		CCNA_02469	0.26	+1.0
2,612,112	+		CCNA_02469	0.27	+0.0
2,612,115	-		CCNA_02469	0.28	-0.3
2,612,115	-		CCNA_02469	0.28	+1.0
2,612,120	-		CCNA_02469	0.28	-0.7
2,612,202	-		CCNA_02469	0.42	-2.1
2,612,226	-		CCNA_02469	0.46	-0.1
2,612,237	-		CCNA_02469	0.48	-0.9
2,612,260	-		CCNA_02469	0.52	-1.3
2,612,276	-		CCNA_02469	0.55	+0.0
2,612,297	+		CCNA_02469	0.58	-0.2
2,612,342	-		CCNA_02469	0.66	+1.8
2,612,394	-		CCNA_02469	0.74	+0.1
2,612,404	-		CCNA_02469	0.76	-0.7
2,612,406	+		CCNA_02469	0.76	-0.8
2,612,414	-		CCNA_02469	0.78	+0.8
2,612,414	-		CCNA_02469	0.78	+0.5
2,612,426	+		CCNA_02469	0.80	+1.0
2,612,439	-		CCNA_02469	0.82	+0.2
2,612,474	+		CCNA_02469	0.88	+0.6
2,612,489	+				+0.8
2,612,511	-				+0.9
2,612,522	+				+0.5
2,612,530	-				+1.8
2,612,540	+				-1.1
2,612,543	+				-0.4
2,612,545	+				+1.0
2,612,545	+				-1.2
2,612,549	-				-0.1
2,612,550	+				+4.8
2,612,553	-				+1.2