Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02444

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,584,417	+				-0.6
2,584,427	-				+0.5
2,584,431	+				+0.5
2,584,431	+				+2.8
2,584,431	+				+1.0
2,584,431	+				+1.8
2,584,431	+				-0.9
2,584,431	+				+0.3
2,584,431	+				-1.2
2,584,431	+				+0.3
2,584,431	+				+0.3
2,584,431	+				-0.9
2,584,431	+				+2.3
2,584,431	+				+0.2
2,584,431	+				+1.5
2,584,431	+				+0.9
2,584,431	+				+0.8
2,584,431	+				+0.4
2,584,431	+				-1.5
2,584,431	+				-1.1
2,584,431	+				-1.0
2,584,431	+				-0.1
2,584,431	+				+1.5
2,584,431	+				+2.0
2,584,431	+				+1.4
2,584,431	+				-0.7
2,584,431	+				-0.3
2,584,431	+				-1.3
2,584,431	+				+0.1
2,584,431	+				+0.3
2,584,431	+				+0.2
2,584,431	+				-0.5
2,584,431	+				-0.7
2,584,431	+				-0.9
2,584,431	+				-1.5
2,584,431	+				-0.8
2,584,431	+				+0.6
2,584,431	+				-1.0
2,584,431	+				-0.9
2,584,431	+				+0.9
2,584,431	+				+1.2
2,584,431	+				+0.7
2,584,431	+				-1.6
2,584,431	+				+0.3
2,584,431	+				+0.1
2,584,431	+				+0.2
2,584,431	+				-1.4
2,584,431	+				+0.9
2,584,431	+				+1.2
2,584,431	+				+2.0
2,584,431	+				-1.0
2,584,431	+				-0.7
2,584,431	+				+0.6
2,584,431	+				-0.6
2,584,431	+				+0.9
2,584,431	+				+0.5
2,584,431	+				+0.4
2,584,431	+				+0.4
2,584,431	+				+1.2
2,584,431	+				-0.1
2,584,431	+				+1.6
2,584,431	+				-0.6
2,584,431	+				+0.1
2,584,439	-				+0.2
2,584,439	-				+0.3
2,584,439	-				-0.6
2,584,439	-				+0.3
2,584,439	-				+1.5
2,584,439	-				+0.9
2,584,439	-				+0.8
2,584,439	-				-0.4
2,584,439	-				+1.1
2,584,439	-				+1.2
2,584,439	-				-0.1
2,584,439	-				-0.4
2,584,439	-				-0.5
2,584,439	-				+0.4
2,584,439	-				-0.8
2,584,439	-				-0.3
2,584,439	-				-0.3
2,584,439	-				-0.9
2,584,439	-				+0.0
2,584,439	-				+0.5
2,584,439	-				+0.5
2,584,439	-				-1.3
2,584,439	-				-1.0
2,584,439	-				+0.2
2,584,439	-				+0.8
2,584,439	-				-1.6
2,584,439	-				-0.1
2,584,439	-				+0.5
2,584,439	-				-0.8
2,584,439	-				-1.2
2,584,439	-				-1.1
2,584,439	-				-0.2
2,584,439	-				-1.0
2,584,439	-				-0.8
2,584,439	-				-1.6
2,584,439	-				-1.5
2,584,439	-				+1.3
2,584,439	-				-1.1
2,584,439	-				-1.2
2,584,439	-				+2.5
2,584,439	-				-2.0
2,584,439	-				-0.6
2,584,439	-				-1.4
2,584,439	-				+0.1
2,584,439	-				+0.6
2,584,439	-				-0.1
2,584,439	-				+0.1
2,584,439	-				-0.1
2,584,439	-				-0.6
2,584,439	-				+1.0
2,584,439	-				+0.1
2,584,439	-				+0.2
2,584,439	-				-0.4
2,584,439	-				+2.3
2,584,439	-				-0.0
2,584,439	-				-0.9
2,584,439	-				+0.5
2,584,439	-				+3.5
2,584,439	-				+0.9
2,584,439	-				-0.4
2,584,439	-				-0.6
2,584,439	-				+2.9
2,584,439	-				+1.2
2,584,439	-				-0.5
2,584,439	-				+0.6
2,584,439	-				+0.6
2,584,439	-				+1.4
2,584,439	-				+0.9
2,584,439	-				+3.7
2,584,439	-				-0.8
2,584,439	-				+1.8
2,584,439	-				+0.4
2,584,439	-				+1.2
2,584,454	+				+0.5
2,584,455	+				+1.0
2,584,462	-				+1.1
2,584,463	-				-0.8
2,584,514	-		CCNA_02443	0.11	+0.0
2,584,532	+		CCNA_02443	0.13	-0.5
2,584,536	-		CCNA_02443	0.13	+2.9
2,584,540	-		CCNA_02443	0.14	+0.5
2,584,551	+		CCNA_02443	0.15	+0.7
2,584,553	-		CCNA_02443	0.15	+0.1
2,584,553	-		CCNA_02443	0.15	-1.1
2,584,553	-		CCNA_02443	0.15	-0.9
2,584,559	-		CCNA_02443	0.16	+0.2
2,584,572	+		CCNA_02443	0.18	-0.2
2,584,572	+		CCNA_02443	0.18	-0.9
2,584,580	-		CCNA_02443	0.18	-2.4
2,584,641	+		CCNA_02443	0.26	+1.8
2,584,641	+		CCNA_02443	0.26	-1.1
2,584,641	+		CCNA_02443	0.26	-0.8
2,584,649	-		CCNA_02443	0.26	-1.3
2,584,673	+		CCNA_02443	0.29	+0.3
2,584,683	+		CCNA_02443	0.30	+0.0
2,584,707	+		CCNA_02443	0.33	+0.5
2,584,709	+		CCNA_02443	0.33	+0.2
2,584,710	-		CCNA_02443	0.34	-0.7
2,584,714	+		CCNA_02443	0.34	+0.9
2,584,719	+		CCNA_02443	0.35	-0.8
2,584,736	-		CCNA_02443	0.37	-0.2
2,584,743	-		CCNA_02443	0.37	-0.2
2,584,751	+		CCNA_02443	0.38	-0.7
2,584,770	+		CCNA_02443	0.41	+1.2
2,584,776	+		CCNA_02443	0.41	-1.2
2,584,827	-		CCNA_02443	0.47	+1.6
2,584,844	+		CCNA_02443	0.49	-0.6
2,584,864	-		CCNA_02443	0.51	-1.5
2,584,881	+		CCNA_02443	0.53	+0.0
2,584,881	+		CCNA_02443	0.53	+0.1
2,584,881	-		CCNA_02443	0.53	+1.9
2,584,889	-		CCNA_02443	0.54	-1.1
2,584,901	-		CCNA_02443	0.56	+0.5
2,584,964	-		CCNA_02443	0.63	-0.9
2,585,006	+		CCNA_02443	0.68	-0.5
2,585,052	-		CCNA_02443	0.73	-1.1
2,585,054	-		CCNA_02443	0.74	-1.4
2,585,058	+		CCNA_02443	0.74	+0.2
2,585,058	+		CCNA_02443	0.74	-0.3
2,585,063	+		CCNA_02443	0.75	-0.8
2,585,066	-		CCNA_02443	0.75	+0.7
2,585,066	-		CCNA_02443	0.75	-0.2
2,585,066	-		CCNA_02443	0.75	+1.2
2,585,071	-		CCNA_02443	0.75	+1.1
2,585,093	-		CCNA_02443	0.78	+1.8
2,585,093	-		CCNA_02443	0.78	+1.0
2,585,102	+		CCNA_02443	0.79	-1.1
2,585,105	-		CCNA_02443	0.79	-1.4
2,585,105	-		CCNA_02443	0.79	+1.5
2,585,105	-		CCNA_02443	0.79	+1.5
2,585,105	-		CCNA_02443	0.79	-0.5
2,585,150	+		CCNA_02443	0.85	-0.9
2,585,245	-				+0.9
2,585,293	+				-0.2
2,585,347	+				+0.6
2,585,355	+				+4.5
2,585,384	+				+0.6
2,585,412	-				+0.2
2,585,427	-				-0.1
2,585,499	-		CCNA_02444	0.15	-0.6
2,585,506	-		CCNA_02444	0.15	+0.0
2,585,547	+		CCNA_02444	0.19	+1.2
2,585,552	+		CCNA_02444	0.20	+0.6
2,585,630	-		CCNA_02444	0.27	-2.6
2,585,657	+		CCNA_02444	0.30	-1.1
2,585,657	+		CCNA_02444	0.30	+0.4
2,585,665	-		CCNA_02444	0.31	+1.0
2,585,672	-		CCNA_02444	0.31	-0.1
2,585,721	-		CCNA_02444	0.36	-1.2
2,585,745	+		CCNA_02444	0.39	+0.7
2,585,793	-		CCNA_02444	0.43	-0.1
2,585,815	-		CCNA_02444	0.45	-1.3
2,585,836	+		CCNA_02444	0.47	+1.7
2,585,841	+		CCNA_02444	0.48	-0.4
2,585,844	-		CCNA_02444	0.48	-0.6
2,585,844	-		CCNA_02444	0.48	-0.3
2,585,844	-		CCNA_02444	0.48	+0.2
2,585,905	+				+3.3
2,585,907	+		CCNA_02444	0.54	+0.3
2,585,913	-		CCNA_02444	0.55	-0.9
2,585,938	+		CCNA_02444	0.57	+0.5
2,585,940	-		CCNA_02444	0.57	-0.4
2,585,946	-		CCNA_02444	0.58	-0.6
2,586,146	-		CCNA_02444	0.77	-0.8
2,586,149	+		CCNA_02444	0.78	-1.3
2,586,206	+		CCNA_02444	0.83	+0.5
2,586,206	+		CCNA_02444	0.83	-0.8
2,586,206	+		CCNA_02444	0.83	+0.9
2,586,206	+		CCNA_02444	0.83	-0.8
2,586,206	+		CCNA_02444	0.83	+0.0
2,586,206	+		CCNA_02444	0.83	+0.2
2,586,206	+		CCNA_02444	0.83	-1.2
2,586,206	+		CCNA_02444	0.83	-0.3
2,586,206	+		CCNA_02444	0.83	+0.3
2,586,214	-		CCNA_02444	0.84	+2.4
2,586,214	-		CCNA_02444	0.84	+0.9
2,586,214	-		CCNA_02444	0.84	+3.3
2,586,214	-		CCNA_02444	0.84	-1.1
2,586,259	+		CCNA_02444	0.88	+0.2
2,586,259	+		CCNA_02444	0.88	-0.3
2,586,348	-				+0.4
2,586,363	-				-0.2
2,586,368	-				+0.2
2,586,394	-				+0.4
2,586,407	+				-0.3
2,586,461	-				+2.3
2,586,480	+				+2.0
2,586,540	+		CCNA_02445	0.15	+0.0
2,586,546	+		CCNA_02445	0.15	+1.2
2,586,546	+		CCNA_02445	0.15	+1.3
2,586,547	+		CCNA_02445	0.16	-0.9
2,586,548	-		CCNA_02445	0.16	+1.1
2,586,554	-		CCNA_02445	0.17	+0.3
2,586,583	+		CCNA_02445	0.20	-0.6
2,586,637	+		CCNA_02445	0.28	-0.1
2,586,660	-		CCNA_02445	0.31	+1.2
2,586,684	+		CCNA_02445	0.34	-0.8
2,586,684	+		CCNA_02445	0.34	+0.2
2,586,691	+		CCNA_02445	0.35	+2.0
2,586,691	+		CCNA_02445	0.35	-1.0
2,586,692	-		CCNA_02445	0.35	+0.6
2,586,692	-		CCNA_02445	0.35	-0.1
2,586,699	-		CCNA_02445	0.36	-1.5
2,586,726	-		CCNA_02445	0.40	+2.7
2,586,728	+		CCNA_02445	0.40	+1.7
2,586,736	-		CCNA_02445	0.41	+0.6
2,586,752	-		CCNA_02445	0.43	-0.8
2,586,784	-		CCNA_02445	0.48	+1.0
2,586,784	-		CCNA_02445	0.48	-1.8
2,586,784	-		CCNA_02445	0.48	-1.3
2,586,788	+		CCNA_02445	0.48	-0.9
2,586,796	-		CCNA_02445	0.49	+0.2
2,586,819	+		CCNA_02445	0.52	-0.1
2,586,827	-		CCNA_02445	0.54	+3.8
2,586,827	-		CCNA_02445	0.54	-0.4
2,586,827	-		CCNA_02445	0.54	+0.2
2,586,850	+		CCNA_02445	0.57	-1.0
2,586,914	+		CCNA_02445	0.65	+0.7
2,586,961	-		CCNA_02445	0.72	-1.0
2,586,964	+		CCNA_02445	0.72	+0.0
2,587,025	-		CCNA_02445	0.80	+0.1
2,587,030	+		CCNA_02445	0.81	-0.6
2,587,068	-		CCNA_02445	0.86	-2.1
2,587,102	+				-0.3
2,587,102	+				-0.9
2,587,117	+				+1.7
2,587,145	+				+1.1
2,587,172	-				-0.2
2,587,231	-				+1.5
2,587,333	-		CCNA_02446	0.14	-0.1
2,587,341	+		CCNA_02446	0.15	+0.5
2,587,341	+		CCNA_02446	0.15	+0.9
2,587,341	+		CCNA_02446	0.15	-0.4
2,587,349	-		CCNA_02446	0.16	+0.9
2,587,349	-		CCNA_02446	0.16	-0.8