Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02435

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,574,695	+				-0.2
2,574,696	-				+0.7
2,574,707	+				+0.3
2,574,868	+				+0.0
2,574,868	+				-1.4
2,574,868	+				-1.0
2,574,876	-				+1.2
2,574,881	-				-1.9
2,574,883	+				-0.3
2,574,883	+				+1.7
2,574,883	+				+0.3
2,574,883	+				+0.1
2,574,888	+				-0.5
2,574,891	-		CCNA_02433	0.11	-0.1
2,574,891	-		CCNA_02433	0.11	+0.7
2,574,891	-		CCNA_02433	0.11	+0.3
2,574,891	-		CCNA_02433	0.11	+0.5
2,574,896	-		CCNA_02433	0.13	+0.2
2,574,907	+		CCNA_02433	0.19	-0.2
2,574,922	-		CCNA_02433	0.27	-0.6
2,574,943	-		CCNA_02433	0.37	+0.6
2,574,945	+		CCNA_02433	0.38	+0.3
2,574,945	+		CCNA_02433	0.38	+0.2
2,574,953	-		CCNA_02433	0.43	+0.8
2,574,964	+		CCNA_02433	0.48	-0.7
2,574,991	+		CCNA_02433	0.62	+1.8
2,574,999	-		CCNA_02433	0.66	-0.7
2,575,072	+				-0.0
2,575,072	+				+0.8
2,575,073	+				+0.6
2,575,080	-				+1.3
2,575,080	-				+0.2
2,575,080	-				+0.0
2,575,080	-				-1.6
2,575,110	+				+0.9
2,575,118	-				-1.0
2,575,222	+				-0.1
2,575,230	-				+0.7
2,575,230	-				+0.6
2,575,230	-				+2.0
2,575,230	-				-0.5
2,575,249	+				+0.1
2,575,278	-				+3.0
2,575,369	-		CCNA_02434	0.27	+1.3
2,575,398	+		CCNA_02434	0.33	+0.8
2,575,418	+		CCNA_02434	0.38	+0.1
2,575,486	+		CCNA_02434	0.53	+0.9
2,575,494	-		CCNA_02434	0.55	+2.2
2,575,494	-		CCNA_02434	0.55	+1.1
2,575,494	-		CCNA_02434	0.55	+1.6
2,575,505	+		CCNA_02434	0.57	-1.6
2,575,623	-		CCNA_02434	0.84	+2.0
2,575,623	-		CCNA_02434	0.84	+1.1
2,575,623	-		CCNA_02434	0.84	+1.3
2,575,647	-		CCNA_02434	0.90	+1.3
2,575,649	-				+0.4
2,575,673	+				+1.3
2,575,680	-				+0.6
2,575,680	-				+2.4
2,575,690	+				+0.2
2,575,701	-				+3.0
2,575,717	+				-0.2
2,577,031	-				-0.1
2,577,031	-				+0.8
2,577,031	-				+3.0
2,577,031	-				+2.1
2,577,036	-				+1.5
2,577,036	-				+0.4
2,577,041	+				-1.4
2,577,080	-				+0.2
2,577,088	-				+0.9
2,577,099	+				+0.6
2,577,114	+				+1.5
2,577,119	+				+0.5
2,577,119	+				+0.8
2,577,119	+				+0.3
2,577,119	+				-0.9
2,577,119	+				+0.3
2,577,122	-				+0.1
2,577,127	-		CCNA_02436	0.10	-0.2
2,577,127	-		CCNA_02436	0.10	-0.7
2,577,127	-		CCNA_02436	0.10	-0.4
2,577,127	-		CCNA_02436	0.10	+0.8
2,577,127	-		CCNA_02436	0.10	-0.7
2,577,127	-		CCNA_02436	0.10	-0.6
2,577,127	-		CCNA_02436	0.10	+0.0
2,577,129	+		CCNA_02436	0.10	+1.2
2,577,132	-		CCNA_02436	0.11	-0.8
2,577,140	+		CCNA_02436	0.13	+1.8
2,577,179	+		CCNA_02436	0.22	-1.1
2,577,192	+		CCNA_02436	0.24	+1.3
2,577,192	+		CCNA_02436	0.24	+1.8
2,577,192	-		CCNA_02436	0.24	+2.5
2,577,192	-		CCNA_02436	0.24	+1.9
2,577,233	+		CCNA_02436	0.34	+1.5
2,577,236	-		CCNA_02436	0.34	+0.9
2,577,273	+		CCNA_02436	0.42	+0.2
2,577,276	+		CCNA_02436	0.43	-0.1
2,577,342	-		CCNA_02436	0.58	-1.1
2,577,460	-		CCNA_02436	0.84	+1.1
2,577,463	+		CCNA_02436	0.85	+1.3
2,577,481	-		CCNA_02436	0.89	-0.2
2,577,509	+				-1.0
2,577,541	-				-0.3
2,577,571	+				+1.7
2,577,720	+				+3.3
2,577,730	+				+3.9
2,577,839	-				+2.0
2,577,853	-				+1.1
2,577,876	+				-1.2
2,577,878	-				+0.8
2,577,884	-				+2.0
2,577,890	-				+1.5
2,577,946	-		CCNA_02437	0.15	+0.5
2,577,984	-		CCNA_02437	0.19	+1.2